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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G06120.1
PEP
AT1G06120.1
Position on the Genome Chromosome Chr1
Start Position 1855963
End Position 1857516
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00411941
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Fatty acid desaturase domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Delta-9 desaturase-like 3 protein
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00487
Pfam Description Details
InterPro ID
IPR005804,IPR015876
InterPro Description Details
GO ID
GO:0006636,GO:0005789,GO:0016717,GO:0009979,GO:0016021
GO Description Details
GOslim ID
GO:0006082,GO:0016020,GO:0016491,GO:0044255,GO:0005783
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Delta-9 desaturase-like 3 protein
OrthoDB(1 item)
130241at33090
Fatty acid desaturase domain
Pfam(1 item)
 
Fatty acid desaturase
InterPro(2 items)
 
Fatty acid desaturase domain
Gene ontology(5 items)
BP
unsaturated fatty acid biosynthetic process
CC
endoplasmic reticulum membrane
MF
oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
MF
16:0 monogalactosyldiacylglycerol desaturase activity
CC
integral component of membrane
GO slim(5 items)
BP
organic acid metabolic process
MF
oxidoreductase activity
BP
cellular lipid metabolic process
CC
endoplasmic reticulum

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.