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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G05710.10
PEP
AT1G05710.10
Position on the Genome Chromosome Chr1
Start Position 1716198
End Position 1717023
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00112534
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Myc-type, basic helix-loop-helix (bHLH) domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor bHLH153
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR036638,IPR011598
InterPro Description Details
GO ID
GO:0005634,GO:0046983,GO:0003700,GO:0003677,GO:0001228
GO Description Details
GOslim ID
GO:0005634,GO:0006351,GO:0003676,GO:0050789,GO:0065009,GO:0005515,GO:0005694
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
bHLH family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor bHLH153
OrthoDB(1 item)
197959at33090
Myc-type, basic helix-loop-helix (bHLH) domain
InterPro(2 items)
 
HLH_DNA-bd_sf
 
Myc-type, basic helix-loop-helix (bHLH) domain
Gene ontology(5 items)
MF
protein dimerization activity
MF
DNA-binding transcription factor activity
MF
DNA-binding transcription activator activity, RNA polymerase II-specific
GO slim(7 items)
BP
transcription, DNA-templated
MF
nucleic acid binding
BP
regulation of biological process
BP
regulation of molecular function
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.