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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G04635.1
PEP
AT1G04635.1
Position on the Genome Chromosome Chr1
Start Position 1291350
End Position 1291805
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00604479
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ribonuclease P/MRP protein subunit
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable ribonuclease P/MRP protein subunit POP5
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF01900
Pfam Description Details
InterPro ID
IPR002759,IPR016819,IPR038085
InterPro Description Details
GO ID
GO:0005773,GO:0008033,GO:0005655,GO:0000172,GO:0004526,GO:0006364
GO Description Details
GOslim ID
GO:0030677,GO:0016070,GO:0005773,GO:0006396,GO:0005732,GO:0016787,GO:0042254,GO:0005730
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G04635
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Probable ribonuclease P/MRP protein subunit POP5
OrthoDB(1 item)
192232at33090
Ribonuclease P/MRP protein subunit
Pfam(1 item)
 
Rpp14/Pop5 family
InterPro(3 items)
 
Ribonuclease P/MRP protein subunit
 
RNase_P/MRP_POP5
Gene ontology(6 items)
BP
tRNA processing
CC
nucleolar ribonuclease P complex
CC
ribonuclease MRP complex
MF
ribonuclease P activity
BP
rRNA processing
GO slim(8 items)
CC
ribonuclease P complex
BP
RNA metabolic process
BP
RNA processing
CC
small nucleolar ribonucleoprotein complex
MF
hydrolase activity
BP
ribosome biogenesis

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.