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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G03600.1
PEP
AT1G03600.1
Position on the Genome Chromosome Chr1
Start Position 898916
End Position 899440
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00390379
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Photosystem II Pbs27
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Photosystem II repair protein PSB27-H1, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF13326
Pfam Description Details
InterPro ID
IPR038450,IPR025585
InterPro Description Details
GO ID
GO:0009507,GO:0009579,GO:0005576,GO:0009534,GO:0009535,GO:0010207,GO:0071484,GO:0009543,GO:0010206
GO Description Details
GOslim ID
GO:0009536,GO:0050896,GO:0006091,GO:0015979,GO:0009579,GO:0016020,GO:0065003,GO:0005576,GO:0019538
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G03600
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Photosystem II repair protein PSB27-H1, chloroplastic
OrthoDB(1 item)
205753at33090
Photosystem II Pbs27
Pfam(1 item)
 
Photosystem II Pbs27
InterPro(2 items)
 
PSII_Pbs27_sf
 
Photosystem II Pbs27
Gene ontology(9 items)
CC
extracellular region
CC
chloroplast thylakoid
CC
chloroplast thylakoid membrane
BP
photosystem II assembly
BP
cellular response to light intensity
CC
chloroplast thylakoid lumen
BP
photosystem II repair
GO slim(9 items)
BP
response to stimulus
BP
generation of precursor metabolites and energy
BP
photosynthesis
BP
protein-containing complex assembly
CC
extracellular region
BP
protein metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.