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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G02790.1
PEP
AT1G02790.1
Position on the Genome Chromosome Chr1
Start Position 610681
End Position 612225
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00402329
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Glycoside hydrolase, family 28
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Exopolygalacturonase clone GBGE184
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00295
Pfam Description Details
InterPro ID
IPR011050,IPR000743,IPR012334,IPR006626
InterPro Description Details
GO ID
GO:0005576,GO:0005975,GO:0004650,GO:0005618,GO:0071555,GO:0047911
GO Description Details
GOslim ID
GO:0016787,GO:0005618,GO:0005975,GO:0071555,GO:0005576
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G02790
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.