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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G02680.1
PEP
AT1G02680.1
Position on the Genome Chromosome Chr1
Start Position 581084
End Position 581919
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00421783
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Transcription initiation factor IID, subunit 13
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription initiation factor TFIID subunit 13
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF02269
Pfam Description Details
InterPro ID
IPR009072,IPR003195
InterPro Description Details
GO ID
GO:0005634,GO:0009960,GO:0006366,GO:0009793,GO:0046982,GO:0005886,GO:0048316
GO Description Details
GOslim ID
GO:0032502,GO:0032501,GO:0005515,GO:0005634,GO:0016020,GO:0000003,GO:0006351
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G02680
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription initiation factor TFIID subunit 13
OrthoDB(1 item)
204975at33090
Transcription initiation factor IID, subunit 13
Pfam(1 item)
 
Transcription initiation factor IID, 18kD subunit
InterPro(2 items)
 
Transcription initiation factor IID, subunit 13
Gene ontology(7 items)
BP
endosperm development
BP
transcription by RNA polymerase II
BP
embryo development ending in seed dormancy
MF
protein heterodimerization activity
CC
plasma membrane
BP
seed development
GO slim(7 items)
BP
developmental process
BP
multicellular organismal process
MF
protein binding
BP
transcription, DNA-templated

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.