Gossypium hirsutum| Assembly Name | Biological Sample | Assembly Level | Annotation (gff / gff3) |
Gene (cds / gene) |
Hayai Annotation ZEN |
Transcripts (cDNA / mRNA) |
Amino Acid (pep / aa) |
Download | JBrowse | Comments |
|---|---|---|---|---|---|---|---|---|---|---|
Texas Marker-1, TM-1 |
Chromosome |
● |
● |
● |
● |
|
|
An inbred line |
||
acc. TM-1, isolate 1008001.06 |
Chromosome |
● |
● |
● |
● |
|
NA |
|||
variety CRI-12, Zhong12 |
Chromosome |
● |
● |
● |
|
NA |
Sequence Type |
Biological Sample | Sequence Name | Accession | JBrowse | Comments | |||
|---|---|---|---|---|---|---|---|---|
TM-1_V2.1 |
||||||||
Whole Genome Sequence (Short Read) |
MCBL |
|
phenotype: brown fiber |
|||||
Whole Genome Sequence (Short Read) |
MCWL |
|
phenotype: white fiber |
|||||
Whole Genome Sequence (Short Read) |
PD3 |
|
phenotype: brown fiber |
|||||
Whole Genome Sequence (Short Read) |
PD93002 |
|
phenotype: white fiber |
|||||
Whole Genome Sequence (Short Read) |
X56 |
|
||||||
Whole Genome Sequence (Short Read) |
X5 |
|
||||||
Whole Genome Sequence (Short Read) |
Acala Maxxa |
|
||||||
Whole Genome Sequence (Short Read) |
X56 |
|
||||||
Whole Genome Sequence (Short Read) |
CIR 7# |
|
||||||
Whole Genome Sequence (Short Read) |
Simian 3# |
|
||||||
Whole Genome Sequence (Short Read) |
Simian 2# |
|
||||||
Whole Genome Sequence (Short Read) |
Xinluzao 42# |
|
||||||
Whole Genome Sequence (Short Read) |
86-1.2 |
|
||||||
Whole Genome Sequence (Short Read) |
Deltapine 15 |
|
||||||
Whole Genome Sequence (Short Read) |
Stoneville 2B |
|
||||||
Whole Genome Sequence (Short Read) |
Shiyuan 321 |
|
||||||
Whole Genome Sequence (Short Read) |
Junmian 1# |
|
||||||
Whole Genome Sequence (Short Read) |
CIR 12# |
|
||||||
Whole Genome Sequence (Short Read) |
S1 |
|
P1_fiber_long |
|||||
Whole Genome Sequence (Short Read) |
S2 |
|
P2_fiber_short |
|||||
Whole Genome Sequence (Short Read) |
S3 |
|
pool_fiber_long |
|||||
Whole Genome Sequence (Short Read) |
S4 |
|
pool_fiber_short |
|||||
Whole Genome Sequence (Short Read) |
sample10 |
|
phenotype: brown fiber |
|||||
Whole Genome Sequence (Short Read) |
sample15 |
|
phenotype: brown fiber |
|||||
Whole Genome Sequence (Short Read) |
sample39 |
|
phenotype: brown fiber |
|||||
Whole Genome Sequence (Short Read) |
sample54 |
|
phenotype: brown fiber |
|||||
Whole Genome Sequence (Short Read) |
sample74 |
|
phenotype: brown fiber |
|||||
Whole Genome Sequence (Short Read) |
sample5 |
|
phenotype: brown fiber |
|||||
Whole Genome Sequence (Short Read) |
sample45 |
|
phenotype: brown fiber |
|||||
Whole Genome Sequence (Short Read) |
sample9 |
|
phenotype: brown fiber |
|||||
Whole Genome Sequence (Short Read) |
BYU11031 |
|
||||||
Whole Genome Sequence (Short Read) |
BYU11026 |
|
||||||
Whole Genome Sequence (Short Read) |
BYU11027 |
|
||||||
Whole Genome Sequence (Short Read) |
BYU11029 |
|
||||||
Whole Genome Sequence (Short Read) |
BYU11014 |
|
||||||
Whole Genome Sequence (Short Read) |
BYU11016 |
|
||||||
Whole Genome Sequence (Short Read) |
BYU11018 |
|
||||||
Whole Genome Sequence (Short Read) |
BYU11011 |
|
||||||
Whole Genome Sequence (Short Read) |
BYU11034 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Deltapine 15 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace CCRI 2 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace 9053 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Xuzhou 209 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Shanmian 7 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Ekangmian 9 |
|
||||||
Whole Genome Sequence (Short Read) |
Zhong 053 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Guannong 1 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Ejing 1 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Chuan 57-681 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace AntongSP 21 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace 52-128 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Jingmian 4 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Jin 3-34-3 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Lone star |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace MO-3 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Jinmian 2 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Xuzhou 1818 |
|
||||||
Whole Genome Sequence (Short Read) |
Zhong 7263 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace MO-3 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Lone star |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Jinyu 3 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Jinmian 2 |
|
||||||
Whole Genome Sequence (Short Read) |
Zhong 7263 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Xuzhou 1818 |
|
||||||
Whole Genome Sequence (Short Read) |
Zhong 053 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Ekangmian 9 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Shanmian 3 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Shanmian 7 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Xuzhou 209 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace 9053 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace CCRI 2 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Deltapine 15 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Jin 3-34-3 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Jingmian 4 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Ejing 1 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Guannong 1 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace AntongSP 21 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace Chuan 57-681 |
|
||||||
Whole Genome Sequence (Short Read) |
Landrace 52-128 |
|
||||||
Whole Genome Sequence (Short Read) |
sGK9708 |
|
||||||
Whole Genome Sequence (Short Read) |
X1 |
|
||||||
Whole Genome Sequence (Short Read) |
X2 |
|
||||||
Whole Genome Sequence (Short Read) |
X3 |
|
||||||
Whole Genome Sequence (Short Read) |
X4 |
|
||||||
Whole Genome Sequence (Short Read) |
X5 |
|
||||||
Whole Genome Sequence (Short Read) |
X4 |
|
||||||
Whole Genome Sequence (Short Read) |
latifolium_13 |
|
||||||
Whole Genome Sequence (Short Read) |
Texas Marker-1, TM-1, TM1 |
|
||||||
Whole Genome Sequence (Short Read) |
Punctatum_25 |
|
||||||
Whole Genome Sequence (Short Read) |
Yucatanense_6 |
|
||||||
Whole Genome Sequence (Short Read) |
CIR_12 |
|
||||||
Whole Genome Sequence (Short Read) |
X1 |
|
||||||
Whole Genome Sequence (Short Read) |
paymaster HS26 |
|
||||||
Whole Genome Sequence (Short Read) |
M-240 RNR |
|
||||||
Whole Genome Sequence (Short Read) |
SureGrow747 |
|
||||||
Whole Genome Sequence (Short Read) |
KK1543 |
|
||||||
Whole Genome Sequence (Short Read) |
611bo |
|
||||||
Whole Genome Sequence (Short Read) |
108fu |
|
||||||
Whole Genome Sequence (Short Read) |
C1470 |
|
||||||