Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Gossypium hirsutum , Upland cotton , ワタ (hirsutum種), キヌワタ

Gossypium hirsutum

Genome Assembly ID:t3635.G005

Sequence Name:Gossypium_hirsutum_v2.1

Details of the Assembled Genome Sequences

Assembly Name Gossypium_hirsutum_v2.1 Biological Sample acc. TM-1, isolate 1008001.06
Number of Sequences 1,027 Number of Chromosomes 2n = 4x = 52
Total Length (bp) 2,306,070,423 N50 Length (bp) 108,141,443
Number of Genes 111,844 Number of Genes Source File GCF_007990345.1_Gossypium_hirsutum_v2.1_protein.faa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Sequel Read Depth 94.06x
Assembly Method MECAT Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Jane Grimwood (HudsonAlpha Institute for Biotechnology) Data Source NCBI
DOI/PMID 10.1038/s41588-020-0614-5 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format