Sequence Name:TM-1_V2.1
Assembly Name | TM-1_V2.1 | Biological Sample | Texas Marker-1, TM-1 |
Number of Sequences | 12,098 | Number of Chromosomes | 2n = 4x = 52 |
Total Length (bp) | 2,298,437,019 | N50 Length (bp) | 107,588,319 |
Number of Genes | 72,761 | Number of Genes Source File | TM-1_V2.1.gene.pep.fa |
Number of Genes Annotated by Hayai-annotation | 72,761 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina | Read Depth | NA |
Assembly Method | DeNovoMAGIC3, BioNano, Hi-C, and POPSEQ | Estimated Genome Size (Mb) | 2,340 |
Sequencing Method Comments | NA | Comments | An inbred line |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Tianzhen Zhang (Zhejiang University) | Data Source | COTTON GEN |
DOI/PMID | 10.1038/s41588-019-0371-5 | Data Source URL | https://www.cottongen.org/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:99.4%[S:6.9%,D:92.5%],F:0.3%,M:0.3%,n:1614 | BUSCO Gene (pep/cds) | C:97.7%[S:7.2%,D:90.5%],F:0.1%,M:2.2%,n:1614 |