Vitis viniferaAssembly Name:Vitis_vinifera.12X
Gene File:Vitis_vinifera.12X.pep.all.fa.gz
| Position on the Genome | Gene Name | CDS | VIT_11s0052g00070.t01 |
| PEP | VIT_11s0052g00070.t01 |
||
| Position on the Genome | Chromosome | 11 | |
| Start Position | 16961991 | ||
| End Position | 17012807 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI02379942 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
||
| OrthoDB | Database version | 10.1 | |
| Description | DNA ligase |
||
| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | DNA ligase |
||
| Accession | |||
| CrossRef Refseq from UniProt | NA |
||
| EC | |||
| KEGG entry | NA |
||
| KO ID | NA |
||
| Pfam ID | PF04675,PF04679,PF16589,PF01068 |
||
| Pfam Description | Details | ||
| InterPro ID | IPR036599,IPR012310,IPR001357,IPR029710,IPR000977,IPR012309,IPR016059,IPR012340,IPR012308,IPR036420 |
||
| InterPro Description | Details | ||
| GO ID | GO:0006260,GO:0006297,GO:0051103,GO:0003677,GO:0032807,GO:0006310,GO:0005524,GO:0006303,GO:0003910,GO:0071897 |
||
| GO Description | Details | ||
| GOslim ID | GO:0043167,GO:0003676,GO:0006281,GO:0006266,GO:0006259,GO:0009059,GO:0016874,GO:0000166,GO:0005634,GO:0032991,GO:0006260 |
||
| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
||
| Best hit taxonomy | Species | Vitis vinifera | |
| Family | Vitaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
