Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_11s0052g00070.t01
CDS Infomation	cds chromosome:12X:11:16961991:17012807:1 gene:VIT_11s0052g00070 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA ligase [Source:UniProtKB/TrEMBL;Acc:D7SQI2]
Sequence	ATGTGCGAAGAAACCAAGTTCAGTGTTCTGTGCAGCCTCTTCACATGGATTCAGAGGAGC AGAACCTCCGCCAAGAAGCGTTCCAAGTTCCGCATATTCCTCGACACCTTTTGCATAAAC GGCCACCAGTTCAGCGCCATACGATTGATCCTCCCCAACCTCGACCGCGAGAGGGGCTCC TACGGACTCAAGGAGTCCGTGCTCGCCACTTGCCTCATTGACGCCCTCGGCATGTCCAGG GAGTCCGAGGACGCCCTTCGCCTCATCAACTGGCGAAAAGGGGGTGCTAAAACCGGCGCC AATGCTGGAAATTTTGCCATGGTCGCGGCTGAAGTGCTGCAGCGTCGGCAAGGAATGACT TCTGGTGGACTGACAATCAAGGAGTTGAATGATTTGCTTGATTGTTTAGCTTCAAGTGAA AATAGAACAGAGAAGACTTCAGTCCTTTCTACCCTGATCAAGAAAACAAACGCACAGGAA ATGAAGTGGATTGTCATGATAATTCTGAAAGACCTGAAGTTGGGAATCAGTGAAAAAAGC ATCTTCCATGAATTCCATCCGGATGCAGAGGACTTGTTTAATGTCACATGCGACTTGAAA CTTGTTTGTGAAAAGCTCAAGGATCGAAGTCAAAGGCATAAACGCCAGGATATTGAAGTT GGAAAAGCTGTGCGACCCCAACTAGCTATGAGGGTTGCTGATGCAACTGCAGCATGGAAG AAGCTTCATGGGAAGGAAGTGGTTGTTGAGTGCAAGTTTGATGGTGACCGCATCCAAATT CATAAGAATGGAGAAGAAATACACTTCTTCTCAAGGAACTTCCTTGATCACCCTGAATAT AAATATGCAATGTCAAACATTGTTGCACAAAATCTTTTGGTTGATAGGTGTATACTTGAT GGTGAAATGTTGGTATGGGACATATCGCTGAATCGTTTTGCTGAGTTTGGTTCAAATCAG GAAATAGCAAAGGCAGCAAAGGAGGGGCTTGACAGTGATCGGCAGGTTCTCTCCTATGTT GCTTTCGACATTCTTTATGTTGGAGATACTAGTGTCATTCACCAAACCTTGAAGGAACGG CATGAGCTTTTGCAGAAAGTCGTGAAGCCTTTGAAGGGTCGTTTTGAAATCTTAGTACCT TCTGGTGGTCTTAATACTCACCGTCCTTCTGGGGAACCATGTTGGTCACTTATTGCTTAT GATGTGGATGATGTCGAGAGGTTCTTCAAGAAAACTGTTGAAAATAGAGATGAAGGCATT GTTTTAAAAGACCTTGGTTCAAAATGGGAGCCAAGTGACAGGAGTGGAAAGTGGTTAAAG TTGAAGCCTGAGTATGTTCATGCAGGTTCTGACCTTGATGTTCTTATAATAGGAGGGTAT TATGGTTCTGGGCGTCGTGGAGGAGAGGTAGCTCAATTCTTGGTGGGCCTTGCTGACCAT TCAGGCCCTGACACATATCCCAGACGATTCATTTCCTTTTGCAGAGTGGGTACTGGACTT TCTGATGACGAGCTTGATGCTGTTGTAACAAAATTGAAGCCTTATTTCAGGAAAAATGAA TACCCAAAAAAGGCACCACCAAGCTTTTATCAAGTCACAAATAATTCAAAAGAGAGACCA GACATTTGGATTGATAGCCCTGAAAAATCAATTATACTTTCTATTACTAGTGATATCCGA ACAATAAGGTCTGAGGTATTTGCTGCACCATACAGCCTGAGGTTCCCACGCATTGATTGT GTGAGATATGACAAGCCTTGGCATGAATGCCTTGATGTGCAATCTTTTATGGAATTGGTA CATTCAAGCAATGGTACCACGCAGAGAGGGGCAGATTATGGGCGCATGCAAGATAGTAAA CCAAAGCGCATGAAATCCTCTAAGAAAGGAGAGCAAAAGACTGCTCATGTTGTTCCTTCT CATTTTATGCAGACTGATGTTACCAATGTCAAGGGCGAAACGCTAATATTTTCGAACATG ATGTTTTACTTTGTTAATACACCTCCAACCCATTCTCTTGATTCCTTGCATAAATTGGTG GTTGAGAATGGAGGAACCTTCTCAATGAATCTGAATAATTCAGTTACACATTGTGTTGCA GCTCAAAGTAAAGGTATCAAATATCAGGCAGCAAAGCTTCGTGGAGATATTATTCATTGT TCTTGGGTCTTTGACTGTTGTTCACAGAAAAAGCTCCTTCCTTTACAGCCAAAGTACTTT CTCTTCCTTTCTGAACATTCAAAGAAGAAGTTACAAGAGGAAATTGACAAATTTTCTGAC TCCTACTACCAGGATCTTGACATTTCAGACATCAAGCAGCTTTTAAGCAATGTGGATAGG TCAGACAACTCCAAAACTATTGATTACTACAAGAACAAATATTGTCCAAAGGAAAAGTGG TCGCGCTTTCATGATTGCTGCATTTGCTTCCACTCCTCAATACAGTCTTCTAATTCGGAT TGGGAACTTCTGTCAAAACTTGCGCTGAGGAGGATGAAGCTTGAAGTTTCCATGGGTGGT GGTAAAGTTGGCAATAATCTTTCTCAGGCCACCCATTTAGTGGTCTTTTCAGTACCAGGA TTTGATTTGGACTTCAGTGACATAATGGAAAGTTTCTCACCAGCAGAGAAACATCTTCTA TGTAATAAAAAGTTGCATGTTGTTGGGTATCAATGGTTAGAAGGCTGCTTGGAGGAGGGC CGGAGGTTGCAAGAACAGAAATATAGCCTGAAACCTGAGGGCTTGGAAGAGTCAAACTTT GGAGAATGCAAACATGATATAGATGTAGAAGCCCCTTCTGTTTTGGACAGTGTGGAGAAC CAAAATTTGGTGTCTTTTCCAGACAAAGAAGGGAAACAAGGTAGAGGAAAAGCTCCTCCA GAAAGCATTAGTATCTTGGCCTCGCCCAAGAGGGACGAGAAAAGGAAAAGAGGAAGGCCT GCTGGCCCAAGCACAAAGAAAGGAAAAGCAGGTTTCAGCCAAGCTCGAAGGACACGGCCC CGGATTGGTAAGCCACCTAAGATATATGAAAACGAATCAGATGCAAGCGATTCAGGTGAA AAAATGGAAGAGGAAGGGACCAAAATGGGAGGGAATCATGCAATCCATGGAGTCGAATGC AAGGAATGTCCAGAAATCCAAGAGACTGAAATAGTAGAAGATTCTGAATCATCACAAAGA GGAAAGACAGAAGAAAAGGAGGTTGCACTAGATAATGTACGTGAAAAATGGTTAGATAGA GCACAGGACATTGAACTGGATAGTGAAAATAAGGTTGACAACAGTAAAAAGACTGAGAAG CTGGAAGTTATGGTTGATCCAGTTCAAGCCATGCTACTAGACATGATACCGAGCCTTGGA GTGAAAAAGGCGGAAAGTACAAATCCTATTATTGATGATGAGAAGCCTCCAGTAGAGCAG GGTGCAGAACCTGTGAAGAAAAAGAAAGTCAGCTACAAGGATGTCGCTGGAGCACTGCTG AAGGATTGGTGA

Peptide Sequence

PEP ID	VIT_11s0052g00070.t01
PEP Infomation	pep chromosome:12X:11:16961991:17012807:1 gene:VIT_11s0052g00070 transcript:VIT_11s0052g00070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA ligase [Source:UniProtKB/TrEMBL;Acc:D7SQI2]
Sequence	MCEETKFSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFCINGHQFSAIRLILPNLDRERGS YGLKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMT SGGLTIKELNDLLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKS IFHEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWK KLHGKEVVVECKFDGDRIQIHKNGEEIHFFSRNFLDHPEYKYAMSNIVAQNLLVDRCILD GEMLVWDISLNRFAEFGSNQEIAKAAKEGLDSDRQVLSYVAFDILYVGDTSVIHQTLKER HELLQKVVKPLKGRFEILVPSGGLNTHRPSGEPCWSLIAYDVDDVERFFKKTVENRDEGI VLKDLGSKWEPSDRSGKWLKLKPEYVHAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLADH SGPDTYPRRFISFCRVGTGLSDDELDAVVTKLKPYFRKNEYPKKAPPSFYQVTNNSKERP DIWIDSPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDCVRYDKPWHECLDVQSFMELV HSSNGTTQRGADYGRMQDSKPKRMKSSKKGEQKTAHVVPSHFMQTDVTNVKGETLIFSNM MFYFVNTPPTHSLDSLHKLVVENGGTFSMNLNNSVTHCVAAQSKGIKYQAAKLRGDIIHC SWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFSDSYYQDLDISDIKQLLSNVDR SDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQSSNSDWELLSKLALRRMKLEVSMGG GKVGNNLSQATHLVVFSVPGFDLDFSDIMESFSPAEKHLLCNKKLHVVGYQWLEGCLEEG RRLQEQKYSLKPEGLEESNFGECKHDIDVEAPSVLDSVENQNLVSFPDKEGKQGRGKAPP ESISILASPKRDEKRKRGRPAGPSTKKGKAGFSQARRTRPRIGKPPKIYENESDASDSGE KMEEEGTKMGGNHAIHGVECKECPEIQETEIVEDSESSQRGKTEEKEVALDNVREKWLDR AQDIELDSENKVDNSKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVEQ GAEPVKKKKVSYKDVAGALLKDW

Transcript Sequence

Transcript ID	VIT_11s0052g00070.t01
Transcript Infomation	cdna chromosome:12X:11:16961991:17012807:1 gene:VIT_11s0052g00070 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA ligase [Source:UniProtKB/TrEMBL;Acc:D7SQI2]
Sequence	ATGTGCGAAGAAACCAAGTTCAGTGTTCTGTGCAGCCTCTTCACATGGATTCAGAGGAGC AGAACCTCCGCCAAGAAGCGTTCCAAGTTCCGCATATTCCTCGACACCTTTTGCATAAAC GGCCACCAGTTCAGCGCCATACGATTGATCCTCCCCAACCTCGACCGCGAGAGGGGCTCC TACGGACTCAAGGAGTCCGTGCTCGCCACTTGCCTCATTGACGCCCTCGGCATGTCCAGG GAGTCCGAGGACGCCCTTCGCCTCATCAACTGGCGAAAAGGGGGTGCTAAAACCGGCGCC AATGCTGGAAATTTTGCCATGGTCGCGGCTGAAGTGCTGCAGCGTCGGCAAGGAATGACT TCTGGTGGACTGACAATCAAGGAGTTGAATGATTTGCTTGATTGTTTAGCTTCAAGTGAA AATAGAACAGAGAAGACTTCAGTCCTTTCTACCCTGATCAAGAAAACAAACGCACAGGAA ATGAAGTGGATTGTCATGATAATTCTGAAAGACCTGAAGTTGGGAATCAGTGAAAAAAGC ATCTTCCATGAATTCCATCCGGATGCAGAGGACTTGTTTAATGTCACATGCGACTTGAAA CTTGTTTGTGAAAAGCTCAAGGATCGAAGTCAAAGGCATAAACGCCAGGATATTGAAGTT GGAAAAGCTGTGCGACCCCAACTAGCTATGAGGGTTGCTGATGCAACTGCAGCATGGAAG AAGCTTCATGGGAAGGAAGTGGTTGTTGAGTGCAAGTTTGATGGTGACCGCATCCAAATT CATAAGAATGGAGAAGAAATACACTTCTTCTCAAGGAACTTCCTTGATCACCCTGAATAT AAATATGCAATGTCAAACATTGTTGCACAAAATCTTTTGGTTGATAGGTGTATACTTGAT GGTGAAATGTTGGTATGGGACATATCGCTGAATCGTTTTGCTGAGTTTGGTTCAAATCAG GAAATAGCAAAGGCAGCAAAGGAGGGGCTTGACAGTGATCGGCAGGTTCTCTCCTATGTT GCTTTCGACATTCTTTATGTTGGAGATACTAGTGTCATTCACCAAACCTTGAAGGAACGG CATGAGCTTTTGCAGAAAGTCGTGAAGCCTTTGAAGGGTCGTTTTGAAATCTTAGTACCT TCTGGTGGTCTTAATACTCACCGTCCTTCTGGGGAACCATGTTGGTCACTTATTGCTTAT GATGTGGATGATGTCGAGAGGTTCTTCAAGAAAACTGTTGAAAATAGAGATGAAGGCATT GTTTTAAAAGACCTTGGTTCAAAATGGGAGCCAAGTGACAGGAGTGGAAAGTGGTTAAAG TTGAAGCCTGAGTATGTTCATGCAGGTTCTGACCTTGATGTTCTTATAATAGGAGGGTAT TATGGTTCTGGGCGTCGTGGAGGAGAGGTAGCTCAATTCTTGGTGGGCCTTGCTGACCAT TCAGGCCCTGACACATATCCCAGACGATTCATTTCCTTTTGCAGAGTGGGTACTGGACTT TCTGATGACGAGCTTGATGCTGTTGTAACAAAATTGAAGCCTTATTTCAGGAAAAATGAA TACCCAAAAAAGGCACCACCAAGCTTTTATCAAGTCACAAATAATTCAAAAGAGAGACCA GACATTTGGATTGATAGCCCTGAAAAATCAATTATACTTTCTATTACTAGTGATATCCGA ACAATAAGGTCTGAGGTATTTGCTGCACCATACAGCCTGAGGTTCCCACGCATTGATTGT GTGAGATATGACAAGCCTTGGCATGAATGCCTTGATGTGCAATCTTTTATGGAATTGGTA CATTCAAGCAATGGTACCACGCAGAGAGGGGCAGATTATGGGCGCATGCAAGATAGTAAA CCAAAGCGCATGAAATCCTCTAAGAAAGGAGAGCAAAAGACTGCTCATGTTGTTCCTTCT CATTTTATGCAGACTGATGTTACCAATGTCAAGGGCGAAACGCTAATATTTTCGAACATG ATGTTTTACTTTGTTAATACACCTCCAACCCATTCTCTTGATTCCTTGCATAAATTGGTG GTTGAGAATGGAGGAACCTTCTCAATGAATCTGAATAATTCAGTTACACATTGTGTTGCA GCTCAAAGTAAAGGTATCAAATATCAGGCAGCAAAGCTTCGTGGAGATATTATTCATTGT TCTTGGGTCTTTGACTGTTGTTCACAGAAAAAGCTCCTTCCTTTACAGCCAAAGTACTTT CTCTTCCTTTCTGAACATTCAAAGAAGAAGTTACAAGAGGAAATTGACAAATTTTCTGAC TCCTACTACCAGGATCTTGACATTTCAGACATCAAGCAGCTTTTAAGCAATGTGGATAGG TCAGACAACTCCAAAACTATTGATTACTACAAGAACAAATATTGTCCAAAGGAAAAGTGG TCGCGCTTTCATGATTGCTGCATTTGCTTCCACTCCTCAATACAGTCTTCTAATTCGGAT TGGGAACTTCTGTCAAAACTTGCGCTGAGGAGGATGAAGCTTGAAGTTTCCATGGGTGGT GGTAAAGTTGGCAATAATCTTTCTCAGGCCACCCATTTAGTGGTCTTTTCAGTACCAGGA TTTGATTTGGACTTCAGTGACATAATGGAAAGTTTCTCACCAGCAGAGAAACATCTTCTA TGTAATAAAAAGTTGCATGTTGTTGGGTATCAATGGTTAGAAGGCTGCTTGGAGGAGGGC CGGAGGTTGCAAGAACAGAAATATAGCCTGAAACCTGAGGGCTTGGAAGAGTCAAACTTT GGAGAATGCAAACATGATATAGATGTAGAAGCCCCTTCTGTTTTGGACAGTGTGGAGAAC CAAAATTTGGTGTCTTTTCCAGACAAAGAAGGGAAACAAGGTAGAGGAAAAGCTCCTCCA GAAAGCATTAGTATCTTGGCCTCGCCCAAGAGGGACGAGAAAAGGAAAAGAGGAAGGCCT GCTGGCCCAAGCACAAAGAAAGGAAAAGCAGGTTTCAGCCAAGCTCGAAGGACACGGCCC CGGATTGGTAAGCCACCTAAGATATATGAAAACGAATCAGATGCAAGCGATTCAGGTGAA AAAATGGAAGAGGAAGGGACCAAAATGGGAGGGAATCATGCAATCCATGGAGTCGAATGC AAGGAATGTCCAGAAATCCAAGAGACTGAAATAGTAGAAGATTCTGAATCATCACAAAGA GGAAAGACAGAAGAAAAGGAGGTTGCACTAGATAATGTACGTGAAAAATGGTTAGATAGA GCACAGGACATTGAACTGGATAGTGAAAATAAGGTTGACAACAGTAAAAAGACTGAGAAG CTGGAAGTTATGGTTGATCCAGTTCAAGCCATGCTACTAGACATGATACCGAGCCTTGGA GTGAAAAAGGCGGAAAGTACAAATCCTATTATTGATGATGAGAAGCCTCCAGTAGAGCAG GGTGCAGAACCTGTGAAGAAAAAGAAAGTCAGCTACAAGGATGTCGCTGGAGCACTGCTG AAGGATTGGTGAAATTGTCAGAATCATACTGGACTGTAATATGTTGTCAACTCTATATGA ACGTTTCCTGTAAGAGATAATAGCTCTGTATATATTACTACTCGGTCCCGTATATTCTCT CAGTGTCCCACTTCCTGTCCTGAGCTTCAGTACCATG