Vitis viniferaAssembly Name:Vitis_vinifera.12X
Gene File:Vitis_vinifera.12X.pep.all.fa.gz
| Position on the Genome | Gene Name | CDS | VIT_08s0007g06740.t01 |
| PEP | VIT_08s0007g06740.t01 |
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| Position on the Genome | Chromosome | 8 | |
| Start Position | 20404886 | ||
| End Position | 20408769 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KPRO00003781 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | E3 ubiquitin-protein ligase |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | refseq |
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| Protein name | putative E3 ubiquitin-protein ligase SINAT1 |
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| Accession | |||
| CrossRef Refseq from UniProt | NA |
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| EC | NA |
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| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF03145 |
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| Pfam Description | Details | ||
| InterPro ID | IPR018121 |
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| InterPro Description | Details | ||
| GO ID | GO:0006511,GO:0005634,GO:0007275 |
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| GO Description | Details | ||
| GOslim ID | GO:0009057,GO:0006508,GO:0032501,GO:0005634,GO:0032502 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Vitis riparia | |
| Family | Vitaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
