Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0641300-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:27512653:27513803:1 gene:Os12g0641300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zn-dependent hydrolases of the beta-lactamase fold. (Os12t0641300-01)
Sequence

ATGGCCACCACCACCACCACCACCACCACCATGGGCGGCCTCCACCGGCTAATAAGCAGG
AGCAGCTGCAGCCGGAGAACCTTCGCCGCCTCCACGCCGCCGCAGCGACCCAGAGCGATA
GCCGTCCGAGTCCGAAGCAGCAGCGCCGGTGTAACGAAGAGCCAGAGGCAGAGGCAGAGG
CAGGTGAAGCTGACATACCTGGAGATCAACAGCTGGGTGTGGGAGGTCGGCGGCGCGCGC
ATCCTGGTCGACCCCATCCTCGCCGGCAACCTCGACTTCGGCGCGCCATGGCTCTTCGAC
GCCGCCAAGAAGCGCCTCAAGAACCTGGGCGTCCAAGATGTGCTGCAGCCTCCGGGGGTC
GACCTGCTCCTCATCACGCAGAGCCTCGACGACCACTGCCACGCGCGCACCCTGGCCCAG
CTCGCCGCCGCCGCCCCCGACCTTCCCGTCGTCACCACCCCCAACGCGCGCCCCGTCCTG
GCCGCGCTGCCCACCCCATTCCGCGACGTCACCTACCTGGAGCCCGGGCAATCCACCAAC
TGCAACGGCGGCGGCGTCCGCATACTGGCCACCCCTGGGCCCGTGCTGGGGCCCCCATGG
CAGCGGCCGGAGAACGGCTACATCATGTTCCTCCTCCAGGAAGAAGAGGAAGACGCCAAG
GGGCTTGTGTACTACGAGCCGCACTGCGTGTACGACCGGTCCTTCCTGGAGAAGGAGGCG
CTGCGTGCCGACGTGGTAATCACGCCCGTCGTGAAGCAGCTCCTCCCGGCCAACTTCACC
CTCGTCGCCGGGCAGGAGGACGCCGTGGAGCTGGCCAGCCTGCTGCGGGCAAGGTACGTG
GTCCCAATGAGCAACGGCGACGTGGACGCCAAGGGCCTCCTCACCGCCGTCGTCGCCACC
GAGGGTACGGTGGAGGCCTTCAAGGACATGCTGGCCGACACGCTCCCGGAGGCTCAGCTG
CTCCACCCAACGCCCGGCGTCCCACTCCACATCCACCTCCCCCACCTTACTTGA

Peptide Sequence

PEP ID

Os12t0641300-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:27512653:27513803:1 gene:Os12g0641300 transcript:Os12t0641300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zn-dependent hydrolases of the beta-lactamase fold. (Os12t0641300-01)
Sequence

MATTTTTTTTMGGLHRLISRSSCSRRTFAASTPPQRPRAIAVRVRSSSAGVTKSQRQRQR
QVKLTYLEINSWVWEVGGARILVDPILAGNLDFGAPWLFDAAKKRLKNLGVQDVLQPPGV
DLLLITQSLDDHCHARTLAQLAAAAPDLPVVTTPNARPVLAALPTPFRDVTYLEPGQSTN
CNGGGVRILATPGPVLGPPWQRPENGYIMFLLQEEEEDAKGLVYYEPHCVYDRSFLEKEA
LRADVVITPVVKQLLPANFTLVAGQEDAVELASLLRARYVVPMSNGDVDAKGLLTAVVAT
EGTVEAFKDMLADTLPEAQLLHPTPGVPLHIHLPHLT

Transcript Sequence

Transcript ID

Os12t0641300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:27512653:27513803:1 gene:Os12g0641300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zn-dependent hydrolases of the beta-lactamase fold. (Os12t0641300-01)
Sequence

GAGATGCAAACGCAAATTTCGCCATGGCCACCACCACCACCACCACCACCACCATGGGCG
GCCTCCACCGGCTAATAAGCAGGAGCAGCTGCAGCCGGAGAACCTTCGCCGCCTCCACGC
CGCCGCAGCGACCCAGAGCGATAGCCGTCCGAGTCCGAAGCAGCAGCGCCGGTGTAACGA
AGAGCCAGAGGCAGAGGCAGAGGCAGGTGAAGCTGACATACCTGGAGATCAACAGCTGGG
TGTGGGAGGTCGGCGGCGCGCGCATCCTGGTCGACCCCATCCTCGCCGGCAACCTCGACT
TCGGCGCGCCATGGCTCTTCGACGCCGCCAAGAAGCGCCTCAAGAACCTGGGCGTCCAAG
ATGTGCTGCAGCCTCCGGGGGTCGACCTGCTCCTCATCACGCAGAGCCTCGACGACCACT
GCCACGCGCGCACCCTGGCCCAGCTCGCCGCCGCCGCCCCCGACCTTCCCGTCGTCACCA
CCCCCAACGCGCGCCCCGTCCTGGCCGCGCTGCCCACCCCATTCCGCGACGTCACCTACC
TGGAGCCCGGGCAATCCACCAACTGCAACGGCGGCGGCGTCCGCATACTGGCCACCCCTG
GGCCCGTGCTGGGGCCCCCATGGCAGCGGCCGGAGAACGGCTACATCATGTTCCTCCTCC
AGGAAGAAGAGGAAGACGCCAAGGGGCTTGTGTACTACGAGCCGCACTGCGTGTACGACC
GGTCCTTCCTGGAGAAGGAGGCGCTGCGTGCCGACGTGGTAATCACGCCCGTCGTGAAGC
AGCTCCTCCCGGCCAACTTCACCCTCGTCGCCGGGCAGGAGGACGCCGTGGAGCTGGCCA
GCCTGCTGCGGGCAAGGTACGTGGTCCCAATGAGCAACGGCGACGTGGACGCCAAGGGCC
TCCTCACCGCCGTCGTCGCCACCGAGGGTACGGTGGAGGCCTTCAAGGACATGCTGGCCG
ACACGCTCCCGGAGGCTCAGCTGCTCCACCCAACGCCCGGCGTCCCACTCCACATCCACC
TCCCCCACCTTACTTGATTCATTCCAATCCATGCATGCCCTCCCTCCATTTAATTTCCTA
CACATAACAACATGGACTATATAGGGCGACTGTAGCTGTATATCTCAATAAATTTTCAAC
TGATGATGATT