Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0640700-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:27475583:27477289:1 gene:Os12g0640700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase-like domain containing protein. (Os12t0640700-01)
Sequence

GGGATCGGCTACTTCGCCAACAAGTTCGCGTCGCCGGACACCTCCGGCGAGGAGCTCCCG
GCGTGCCGCAACCTCTGCTCGGCCAACTGCTCCTGCCTCGGCTTCTTCTACAGGAACTCC
TCCAAGTCTTGCTTCCTGCTGAACTACCGGATCGGCTCCCTCTTCCGCGGCGACAGCGAC
GCCGCCGTCGGCTTCATCAAGACGTTGCCGCCGGCGTCGCGTCGCCAGGGCGGCGGCAAG
GGCTCGTCGCTCAGCTTTATAACCATAGTGTTCGGCATCGCGCTGCCAACCGTGGCGGCC
GTGCTCATCGGCTTCGTCGTGTACGTGATGTGGGTGAAGAGCCGGCAGGCCAGCAACAAG
AAGAAGAAGAAGAAGCAGGGCGGCAGCCGCAGCTGGTTCAAGCTGCCGATGCTGTCGTCG
CAGCAGGCGTCGTATGCGAGTGAGGAGCAGCAGGGCGAAGAAGACGACGGCGACGGCGAC
GAGGTTCTCATCCCCGGGTTGCCGGCGAGGTTCACGTACGCGGAGCTGGAGGAGGCGACG
GAGGGGTTCAAGTCGCAGATCGGGTCGGGAGGGTTCGGGTGCGTGTACAGGGGCGAGCTC
ACAGACCCAGAGCGGAGCGCGGTGGTGGCGGTGAAGCGGATGAACAACCTTGGGTCGCAG
GGGCGACGCGAGTTCCTGACGGAGATGGCGGTGATCGGGAACGCGCACCACGTGAACCTC
GTCAAGCTGCGCGGGTTCTGCGCCGAGGGCGCGCGGCAGCTGCTGGTGTACGAGTACATG
AACCGCGGGTCGCTGGACCAGTGCCTGTTCCGCGCCGCCGCCGCCCCGCTGGAGTGGCCG
GAGCGGATGGGCGTGTGCGTGGGCGCGGCGCGCGGGCTGGCGTACCTGCACGCCGGCTGC
ACCCGCAAGATCCTCCACTGCGACGTCAAGCCGGAGAACATCCTGCTGAACGACCGCGGC
GGAGTCAAGATCGCCGACTTCGGGCTGGCGAAGCTGATGAGCCCGGAGCAGTCGGGGCTC
TTCACCACCATGCGCGGCACCCGCGGGTACCTGGCGCCGGAGTGGCTCACCAACGCGCCC
ATCACCGACAAGGCCGACGTGTACAGCTTCGGCATGGTGCTGCTGGAGATCGTGCGCGGC
AGGAAGAACTGCAGGTCGGGCAAGGGCAGCGGCGGCGAGGCTTCGTCGGACTCGGACGGC
TACTTCCCGGCGATGGCGCTAGAGCTGCACGAGCAAGGGCAGTACGAGGCGGTGGTGGAC
CAGCGGCTGGAAGGGAGGGCGGACGTGGCGCAGGTGGAGCGGGTGGTGCGCGTGGCGCTC
TGCTGCCTTCACGAGGACGCGGCGCTGCGGCCGGCCATGACGACGGTGTCCGCCATGCTC
GACGGCAGCATGGAGGCCGGAGTTCCCAGGACGGAGCTGCTCGACTACCTGCGCTTGTAC
GGCCGCGGCCTGGTCGACGTCCGCTCCGGCCTCCATGCTGCGGGGAAAGGCGGCTCCGAC
TTCACCAGCGGCGGCGCCGGCAGCAGCAGCTGGTCGCCCACGTCGTGCGTGTCGGCGCAG
CAGCTGTCGGGCCCCAGATGA

Peptide Sequence

PEP ID

Os12t0640700-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:27475583:27477289:1 gene:Os12g0640700 transcript:Os12t0640700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase-like domain containing protein. (Os12t0640700-01)
Sequence

GIGYFANKFASPDTSGEELPACRNLCSANCSCLGFFYRNSSKSCFLLNYRIGSLFRGDSD
AAVGFIKTLPPASRRQGGGKGSSLSFITIVFGIALPTVAAVLIGFVVYVMWVKSRQASNK
KKKKKQGGSRSWFKLPMLSSQQASYASEEQQGEEDDGDGDEVLIPGLPARFTYAELEEAT
EGFKSQIGSGGFGCVYRGELTDPERSAVVAVKRMNNLGSQGRREFLTEMAVIGNAHHVNL
VKLRGFCAEGARQLLVYEYMNRGSLDQCLFRAAAAPLEWPERMGVCVGAARGLAYLHAGC
TRKILHCDVKPENILLNDRGGVKIADFGLAKLMSPEQSGLFTTMRGTRGYLAPEWLTNAP
ITDKADVYSFGMVLLEIVRGRKNCRSGKGSGGEASSDSDGYFPAMALELHEQGQYEAVVD
QRLEGRADVAQVERVVRVALCCLHEDAALRPAMTTVSAMLDGSMEAGVPRTELLDYLRLY
GRGLVDVRSGLHAAGKGGSDFTSGGAGSSSWSPTSCVSAQQLSGPR

Transcript Sequence

Transcript ID

Os12t0640700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:27475583:27477289:1 gene:Os12g0640700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase-like domain containing protein. (Os12t0640700-01)
Sequence

GGGGATCGGCTACTTCGCCAACAAGTTCGCGTCGCCGGACACCTCCGGCGAGGAGCTCCC
GGCGTGCCGCAACCTCTGCTCGGCCAACTGCTCCTGCCTCGGCTTCTTCTACAGGAACTC
CTCCAAGTCTTGCTTCCTGCTGAACTACCGGATCGGCTCCCTCTTCCGCGGCGACAGCGA
CGCCGCCGTCGGCTTCATCAAGACGTTGCCGCCGGCGTCGCGTCGCCAGGGCGGCGGCAA
GGGCTCGTCGCTCAGCTTTATAACCATAGTGTTCGGCATCGCGCTGCCAACCGTGGCGGC
CGTGCTCATCGGCTTCGTCGTGTACGTGATGTGGGTGAAGAGCCGGCAGGCCAGCAACAA
GAAGAAGAAGAAGAAGCAGGGCGGCAGCCGCAGCTGGTTCAAGCTGCCGATGCTGTCGTC
GCAGCAGGCGTCGTATGCGAGTGAGGAGCAGCAGGGCGAAGAAGACGACGGCGACGGCGA
CGAGGTTCTCATCCCCGGGTTGCCGGCGAGGTTCACGTACGCGGAGCTGGAGGAGGCGAC
GGAGGGGTTCAAGTCGCAGATCGGGTCGGGAGGGTTCGGGTGCGTGTACAGGGGCGAGCT
CACAGACCCAGAGCGGAGCGCGGTGGTGGCGGTGAAGCGGATGAACAACCTTGGGTCGCA
GGGGCGACGCGAGTTCCTGACGGAGATGGCGGTGATCGGGAACGCGCACCACGTGAACCT
CGTCAAGCTGCGCGGGTTCTGCGCCGAGGGCGCGCGGCAGCTGCTGGTGTACGAGTACAT
GAACCGCGGGTCGCTGGACCAGTGCCTGTTCCGCGCCGCCGCCGCCCCGCTGGAGTGGCC
GGAGCGGATGGGCGTGTGCGTGGGCGCGGCGCGCGGGCTGGCGTACCTGCACGCCGGCTG
CACCCGCAAGATCCTCCACTGCGACGTCAAGCCGGAGAACATCCTGCTGAACGACCGCGG
CGGAGTCAAGATCGCCGACTTCGGGCTGGCGAAGCTGATGAGCCCGGAGCAGTCGGGGCT
CTTCACCACCATGCGCGGCACCCGCGGGTACCTGGCGCCGGAGTGGCTCACCAACGCGCC
CATCACCGACAAGGCCGACGTGTACAGCTTCGGCATGGTGCTGCTGGAGATCGTGCGCGG
CAGGAAGAACTGCAGGTCGGGCAAGGGCAGCGGCGGCGAGGCTTCGTCGGACTCGGACGG
CTACTTCCCGGCGATGGCGCTAGAGCTGCACGAGCAAGGGCAGTACGAGGCGGTGGTGGA
CCAGCGGCTGGAAGGGAGGGCGGACGTGGCGCAGGTGGAGCGGGTGGTGCGCGTGGCGCT
CTGCTGCCTTCACGAGGACGCGGCGCTGCGGCCGGCCATGACGACGGTGTCCGCCATGCT
CGACGGCAGCATGGAGGCCGGAGTTCCCAGGACGGAGCTGCTCGACTACCTGCGCTTGTA
CGGCCGCGGCCTGGTCGACGTCCGCTCCGGCCTCCATGCTGCGGGGAAAGGCGGCTCCGA
CTTCACCAGCGGCGGCGCCGGCAGCAGCAGCTGGTCGCCCACGTCGTGCGTGTCGGCGCA
GCAGCTGTCGGGCCCCAGATGACATGACACACACATTTACTACTGTTTTTTCTTTTTCTT
GTGTGAATACTACTGTAGATTATACAGAATATTTTCCATGTTGAGCTGCTATTGTTGCAG
GCAAATCGCTGCATATGATTGATCGCT