Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0639800-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:27438961:27441793:1 gene:Os12g0639800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CDS_VAMP. (Os12t0639800-00)
Sequence	ATGGCGGAGTCGAAGCTGATATACGCGATGGTGGCGCGAGGGACGGTGGTGCTGGCGGAG CACACGGCGTACGCCGGCAACTTCCGGGACATCGCCGCGCAGTGCCTGCAGAAGCTCCCC GCCGGCGACAACCGCCTCACCTACACCTGCGACGCCCACACCTTCAACTTCCTCATCCAC CAAGGCTACGCATACTGCGTGGTTGCAACCGAGTCGAGTGGCCGGCAGATTCCTCTCGCC TTGCTAGATATGATCAAGGAGGATTTCAACAAGAGGTATGCAGGAGGAAAAGCAGCCACA GCTGCAGCCAACAGCCTCAGCCGAGATTTCGGGCCAAGGCTTGGAGAGCAGATGAAGTAC TGCATGGATCACCCTGAGGAGGTGAGCAAGCTAGCCAAAGTGAAAGCTCAGGTCTCTGAA GTTAAAGGCATCATGATGGAAAACATTGACAAGGCCATTGATCGCGGACAGCAGATCGAC GTACTTGTCAGCAGGACAGAGCAACTCCATGACCAGGCTGCTGATTTCAGGCAGCAAGGG ACGCGAGTGCGGCGCAAGATGTGGTACCAGAACATGAAGATCAAACTCATCGTCCTCGGT ATCATCATCGCGCTCATCCTCATCATAATCCTCTCCGTTTGCCACGGCTTCAAATGCTAG

Peptide Sequence

PEP ID	Os12t0639800-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:27438961:27441793:1 gene:Os12g0639800 transcript:Os12t0639800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CDS_VAMP. (Os12t0639800-00)
Sequence	MAESKLIYAMVARGTVVLAEHTAYAGNFRDIAAQCLQKLPAGDNRLTYTCDAHTFNFLIH QGYAYCVVATESSGRQIPLALLDMIKEDFNKRYAGGKAATAAANSLSRDFGPRLGEQMKY CMDHPEEVSKLAKVKAQVSEVKGIMMENIDKAIDRGQQIDVLVSRTEQLHDQAADFRQQG TRVRRKMWYQNMKIKLIVLGIIIALILIIILSVCHGFKC

Transcript Sequence

Transcript ID	Os12t0639800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:27438961:27441793:1 gene:Os12g0639800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CDS_VAMP. (Os12t0639800-00)
Sequence	ATTGACACAATTAAGCTAGGGGAAATTGATGAGGTTCTTGAATAACTAGTCCAAGACGGT CGGCCGGCGTTTCATTTCGTTTGCTTCCATCGATCTTTCCTTCCTCCCTACCTTGGCCAC AACGCCCACGTACACCTTCCATTGTTGAGTGTTGACACACAAGAATTGCAATTACAACAA GAAGAAGCAAGATCAAGAATCAAGATGGCGGAGTCGAAGCTGATATACGCGATGGTGGCG CGAGGGACGGTGGTGCTGGCGGAGCACACGGCGTACGCCGGCAACTTCCGGGACATCGCC GCGCAGTGCCTGCAGAAGCTCCCCGCCGGCGACAACCGCCTCACCTACACCTGCGACGCC CACACCTTCAACTTCCTCATCCACCAAGGCTACGCATACTGCGTGGTTGCAACCGAGTCG AGTGGCCGGCAGATTCCTCTCGCCTTGCTAGATATGATCAAGGAGGATTTCAACAAGAGG TATGCAGGAGGAAAAGCAGCCACAGCTGCAGCCAACAGCCTCAGCCGAGATTTCGGGCCA AGGCTTGGAGAGCAGATGAAGTACTGCATGGATCACCCTGAGGAGGTGAGCAAGCTAGCC AAAGTGAAAGCTCAGGTCTCTGAAGTTAAAGGCATCATGATGGAAAACATTGACAAGGCC ATTGATCGCGGACAGCAGATCGACGTACTTGTCAGCAGGACAGAGCAACTCCATGACCAG GCTGCTGATTTCAGGCAGCAAGGGACGCGAGTGCGGCGCAAGATGTGGTACCAGAACATG AAGATCAAACTCATCGTCCTCGGTATCATCATCGCGCTCATCCTCATCATAATCCTCTCC GTTTGCCACGGCTTCAAATGCTAGATAGTATTCGTTATGCACTCCACATTGTTGTCATCC TCAATTCATATATATATATATATATAATTGCTACTCCCTCCGTTTCACAATGTAAGTCAT TCTAGCATTTTCCACATTCATATTGATGTTTAGATTCATTAACATCAATATGAATGTGGG ATATGCTAGAATGACTTATATTGTGAAACGGAGGAAGTAGCAAGGAATTATTTTGATAGT AGTACATATACTGAATAATACTAGTAGTTGCTTTTTTGACATCTGACAAGAGCAAATTAA GACTAGTAAACAGACATAAGCGTTGATCGCTTGACG