Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0639600-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:27430236:27435072:1 gene:Os12g0639600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hedgehog-interacting-like protein. (Os12t0639600-01);Six-bladed beta-propeller, TolB-like domain containing protein. (Os12t0639600-02)
Sequence	ATGCTGCGCCGCCGCGGGCTCCTCCTCGTCTTCGTCGTCGTCTGCTTCGGCGGCGGCGGC TGGCTCCTTCCCGCCTCCCGTGCCATGCCGCTATGCACGGACTCCAGGCCTCCCGTGGCG CTCAACAAGACGCTCGCCTTCTGCGCCTACGCCCGGGGGAGCAGCAGCTGCTGCGACGCC GCCGCAGACGCTACTTTGCAGAAACAGTTCGATGCCTTCAACGTCTCCGACGCCTCCTGC GCCGCCCTCCTCAAGCCCATCCTCTGCGCGAAATGCAATCCGTATTCTGCTGAGCTGTTC AACGCCGGCCCAAACATTCGGACTATCCCTTTCCTGTGCAACTCTACCTCATCCTCTTCT GCTCAATCAAAGGACTCCACACAAGACTACTGCAAATTAGTCTGGGAAACTTGCAAAGAT GTGACCATATCCAACTCCCCCTTTCAGCCACCGCTTCAAGGCGGCGCGCCACTTCCCACT TCATCATCCAAGCTTACTGATGATTGGCAGTCTGAAGCTGACTTCTGCAAATCATTTGGC GGTGCGCCTAACGACCAATCTGTTTGCTTCAGCGGGAACTCTGTCTCATTTAACACCACT CCACCTTCGCCCTCTCTGAAAGGGATATGCCTAGAGAGGATAGGCAACGGATCATACCTT AACATGGCTCCTCACCCTGATGGCTCCAATAGAATCTTCTTAGGCAGCCAACCTGGGAAG ATATGGTTGGCAACAGTTCCTGACCAGGGATCTGGAGGCATCCTGCAGTTTGATGAGACA AGCCCATTTGCTGATCTAACCGATCAGGTGCATTTCGATTCGCAATTTGGGCTCATGGGC ATGGCATTTCATCCCAATTTTGCAACCAATGGCCGCTTCTTTGCCTCTTACAACTGTGAT AGGACAAAGTCACCCAGCTGTTCTGGTAGGTGCTCTTGTAACTCTGATGTCGGCTGTGAT CCCTCAAAGGTTGGCACGGATAATGGCGCTCAACCATGCCAATATCAAGTTGTTGTATCA GAATATTCCGCTAAAGGTTCTTCAGCAAATATTTCTGAGGTTACGTCTGCTGATCCATCC GAAGTCACAAGGATATTTACCATGGGGCTGCCTTATACGTCTCAGCATGGAGGTCAGATC CTCTTTGGGCCTACTGACGGATATCTCTACCTCATGATGGGGGATGGTGGAGGAAAGGGG GACCCTTTTAATTTCTCTCAGAACAAAAAGTCGCTTCTGGGAAAAATTATGAGGCTTGAT GTTGATAATCCACCAAGACAGAGTGAAATTGCTAACCAGAGCTTGTGGGGTAACTACTCC ATTCCAAAAGACAACCCATACACTGATGACAGTGACTTAGAACCAGAAGTTTGGGCATTG GGTCTTAGAAACCCATGGAGATGCAGCTTTGATTCCGCGAGGCCTTCCTACTTCTACTGT GCCGATGTTGGTCAGGATCAATACGAAGAAGTAGATTTGATCTCCAAGGGTGGAAACTAT GGATGGCGTGCATATGAGGGGCCACTTGTTTTCAATCCACCTTCGGCACCTGGAGGGAAC ACTTCCCTCAATTCCATAAACGCCATTCCCCCTATCATGGGCTACAGCCATTCTGATGTC AACAAGAAGATTGGATCTGCGTCAATAATAGGTGGTAATGTTTATCGAGGATCTACCGAC CCCTGCTTGGTCGGAAGGTACCTATACGCCGATCTGTATGCATCAGCGATGTGGACCGGC ACAGAGGCTCCAGAGAGCAGCGGGAACTACAGCTCGAGTCTGATCTCCTTCAGCTGCTCC AAGAGTTCTCCTATAGCGTGTGACACTGCTGCTGGAAGCCCCCTCCCATCACTTGGGTAC ATATACTCGTTTGGCGAGGACAACAACAAGGACACCTACGTCCTGTCGAGCAAGGGCGTC TACCGGGTTGTGCGGCCCAGCCTCTGCGGCTACACCTGTCCAACAGAGAAACCTGCGACG AACACTGGGACGACGACGCCTTCGTCAGCGGCATCAGTGACAGGCAAGCAGATGATGGGA GCGCTTCTGCTGTCGGTTCTTATGTTCTGGGTTTTGGTAAGATAG

Peptide Sequence

PEP ID	Os12t0639600-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:27430236:27435072:1 gene:Os12g0639600 transcript:Os12t0639600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hedgehog-interacting-like protein. (Os12t0639600-01);Six-bladed beta-propeller, TolB-like domain containing protein. (Os12t0639600-02)
Sequence	MLRRRGLLLVFVVVCFGGGGWLLPASRAMPLCTDSRPPVALNKTLAFCAYARGSSSCCDA AADATLQKQFDAFNVSDASCAALLKPILCAKCNPYSAELFNAGPNIRTIPFLCNSTSSSS AQSKDSTQDYCKLVWETCKDVTISNSPFQPPLQGGAPLPTSSSKLTDDWQSEADFCKSFG GAPNDQSVCFSGNSVSFNTTPPSPSLKGICLERIGNGSYLNMAPHPDGSNRIFLGSQPGK IWLATVPDQGSGGILQFDETSPFADLTDQVHFDSQFGLMGMAFHPNFATNGRFFASYNCD RTKSPSCSGRCSCNSDVGCDPSKVGTDNGAQPCQYQVVVSEYSAKGSSANISEVTSADPS EVTRIFTMGLPYTSQHGGQILFGPTDGYLYLMMGDGGGKGDPFNFSQNKKSLLGKIMRLD VDNPPRQSEIANQSLWGNYSIPKDNPYTDDSDLEPEVWALGLRNPWRCSFDSARPSYFYC ADVGQDQYEEVDLISKGGNYGWRAYEGPLVFNPPSAPGGNTSLNSINAIPPIMGYSHSDV NKKIGSASIIGGNVYRGSTDPCLVGRYLYADLYASAMWTGTEAPESSGNYSSSLISFSCS KSSPIACDTAAGSPLPSLGYIYSFGEDNNKDTYVLSSKGVYRVVRPSLCGYTCPTEKPAT NTGTTTPSSAASVTGKQMMGALLLSVLMFWVLVR

Transcript Sequence

Transcript ID	Os12t0639600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:27430236:27435072:1 gene:Os12g0639600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hedgehog-interacting-like protein. (Os12t0639600-01);Six-bladed beta-propeller, TolB-like domain containing protein. (Os12t0639600-02)
Sequence	GCAGCTCGCACCAGCACAAGTCAACAGTTGAGCTCCTCCATCCACTTGACTACTCCTACT TGAGAGAGAGAGAGAGATAGTGCCATTGCCACTGCATCCACCATTCAATCTCACACCTCC GGGCTCCGGCAAGGGAGACAGAGATGCTGCGCCGCCGCGGGCTCCTCCTCGTCTTCGTCG TCGTCTGCTTCGGCGGCGGCGGCTGGCTCCTTCCCGCCTCCCGTGCCATGCCGCTATGCA CGGACTCCAGGCCTCCCGTGGCGCTCAACAAGACGCTCGCCTTCTGCGCCTACGCCCGGG GGAGCAGCAGCTGCTGCGACGCCGCCGCAGACGCTACTTTGCAGAAACAGTTCGATGCCT TCAACGTCTCCGACGCCTCCTGCGCCGCCCTCCTCAAGCCCATCCTCTGCGCGAAATGCA ATCCGTATTCTGCTGAGCTGTTCAACGCCGGCCCAAACATTCGGACTATCCCTTTCCTGT GCAACTCTACCTCATCCTCTTCTGCTCAATCAAAGGACTCCACACAAGACTACTGCAAAT TAGTCTGGGAAACTTGCAAAGATGTGACCATATCCAACTCCCCCTTTCAGCCACCGCTTC AAGGCGGCGCGCCACTTCCCACTTCATCATCCAAGCTTACTGATGATTGGCAGTCTGAAG CTGACTTCTGCAAATCATTTGGCGGTGCGCCTAACGACCAATCTGTTTGCTTCAGCGGGA ACTCTGTCTCATTTAACACCACTCCACCTTCGCCCTCTCTGAAAGGGATATGCCTAGAGA GGATAGGCAACGGATCATACCTTAACATGGCTCCTCACCCTGATGGCTCCAATAGAATCT TCTTAGGCAGCCAACCTGGGAAGATATGGTTGGCAACAGTTCCTGACCAGGGATCTGGAG GCATCCTGCAGTTTGATGAGACAAGCCCATTTGCTGATCTAACCGATCAGGTGCATTTCG ATTCGCAATTTGGGCTCATGGGCATGGCATTTCATCCCAATTTTGCAACCAATGGCCGCT TCTTTGCCTCTTACAACTGTGATAGGACAAAGTCACCCAGCTGTTCTGGTAGGTGCTCTT GTAACTCTGATGTCGGCTGTGATCCCTCAAAGGTTGGCACGGATAATGGCGCTCAACCAT GCCAATATCAAGTTGTTGTATCAGAATATTCCGCTAAAGGTTCTTCAGCAAATATTTCTG AGGTTACGTCTGCTGATCCATCCGAAGTCACAAGGATATTTACCATGGGGCTGCCTTATA CGTCTCAGCATGGAGGTCAGATCCTCTTTGGGCCTACTGACGGATATCTCTACCTCATGA TGGGGGATGGTGGAGGAAAGGGGGACCCTTTTAATTTCTCTCAGAACAAAAAGTCGCTTC TGGGAAAAATTATGAGGCTTGATGTTGATAATCCACCAAGACAGAGTGAAATTGCTAACC AGAGCTTGTGGGGTAACTACTCCATTCCAAAAGACAACCCATACACTGATGACAGTGACT TAGAACCAGAAGTTTGGGCATTGGGTCTTAGAAACCCATGGAGATGCAGCTTTGATTCCG CGAGGCCTTCCTACTTCTACTGTGCCGATGTTGGTCAGGATCAATACGAAGAAGTAGATT TGATCTCCAAGGGTGGAAACTATGGATGGCGTGCATATGAGGGGCCACTTGTTTTCAATC CACCTTCGGCACCTGGAGGGAACACTTCCCTCAATTCCATAAACGCCATTCCCCCTATCA TGGGCTACAGCCATTCTGATGTCAACAAGAAGATTGGATCTGCGTCAATAATAGGTGGTA ATGTTTATCGAGGATCTACCGACCCCTGCTTGGTCGGAAGGTACCTATACGCCGATCTGT ATGCATCAGCGATGTGGACCGGCACAGAGGCTCCAGAGAGCAGCGGGAACTACAGCTCGA GTCTGATCTCCTTCAGCTGCTCCAAGAGTTCTCCTATAGCGTGTGACACTGCTGCTGGAA GCCCCCTCCCATCACTTGGGTACATATACTCGTTTGGCGAGGACAACAACAAGGACACCT ACGTCCTGTCGAGCAAGGGCGTCTACCGGGTTGTGCGGCCCAGCCTCTGCGGCTACACCT GTCCAACAGAGAAACCTGCGACGAACACTGGGACGACGACGCCTTCGTCAGCGGCATCAG TGACAGGCAAGCAGATGATGGGAGCGCTTCTGCTGTCGGTTCTTATGTTCTGGGTTTTGG TAAGATAGAAACTGCAAAAATAAGCCTCTTGCACTGTTAGCTAGTACTCCTATATAAGTC ATGATTTGAGTCCTGATGCACCCCTCCTCACTCTTTTTTCCTTTTTCCTTTGTCTGAACA ATCTCACTGTCTTGATAACCGTATGTAAATAATCAGTATTTCAGTTATGCAAGAGAGGGT TGCATCATTATCAAGGTGAATGAAGTTTATTTCATCATACAGT