Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0639100-03
CDS Infomation

cds chromosome:IRGSP-1.0:12:27409532:27410657:1 gene:Os12g0639100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAJOR FACILITATOR SUPERFAMILY 8 description:Major facilitator superfamily MFS_1 protein. (Os12t0639100-01);Major facilitator superfamily MFS_1 protein. (Os12t0639100-02);Similar to nodulin-like protein. (Os12t0639100-03)
Sequence

ATGTTGGCGATATTGCCCACTGCCATCACCCTGCTGCTTATGTATTTTGTCGATGTCCAC
CGTTCTGATCATCAACGGTACAACAAGAAGTTCATGGATGCTTTCTCCCTCATTGCCATT
ACTGTTGCTGGTTATCTAATGATCATCATAATCTGTGACCAAGTATTGAAGATAATAAGT
TCAGCTGTGCAGACTGTTTGCTTTGTGATACTCCTACTGTTGGTCCTGTCTCCAGTGGCT
ATTGCTGTGAAGGCCCAGAAGACAGAATCAATGAAGCAAGAAGAAGAAACCAGGGATCAA
GCTGAAAGAATCGGACTACTCCAAGAGCAAATTAGTACAAATGCCAGCTCCAGTAGCGAT
GAGCGATGTCAAGAACTGTCGACAGGCAAAGAAAACATGAATCTGGTGCAGGCAATGTGC
AAGCTGAACTTCTGGCTGCTGTTCCTAGCAATGTCCTGTGGGATGGGATCAGGGCTTGCA
ACGGTGAACAACATCAGCCAGATCGGCGGCTCCCTCGGGTACTCGACCAAGGAGACGAGC
ACACTGGTGTCACTCTGGAGCATCTGGAACTTCTCAGGGAGGTTTGGTGCCGGCTACATA
TCCGACCACTTCCTCCGTTCGCGGGGAGTCGGTCGCCCTTTCTTCATCGGCGTCACGCTC
CTGGTCATGAGCTTGGGCCACGCCATCATCGCCTCCGGCATCCTGGCGTCGCTCTACGTC
GGGTCGGTGCTCGTCGGTCTTTGCTATGGGTGTCAGTGGGCACTGATGCCGAGCATCACG
TCGGAGATATTCGGGCTGAACCATTTCGGCACCATCTTCAACGTGGTGGCGGTGGCGAGC
CCCGTGGGATCTTACATCCTCTCGGTGAGGGTGGTGGGTTACATCTACGACATGGAGTCG
CCGCCGGGAGCTCGTGCCTGCTCCGGTAACCATTGCTTCGTTTTGTCGTTCGTCATCATG
GCGTGTGTCTGCGTGGTTGGCTCTGCTGTCGCCTTCATGCTCTTCGTCAGGACGAGGAGG
TTTTATAAACGGGTTGTGTACGCCAGGTTGCAATCTTTTCTATAG

Peptide Sequence

PEP ID

Os12t0639100-03
PEP Infomation

pep chromosome:IRGSP-1.0:12:27409532:27410657:1 gene:Os12g0639100 transcript:Os12t0639100-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAJOR FACILITATOR SUPERFAMILY 8 description:Major facilitator superfamily MFS_1 protein. (Os12t0639100-01);Major facilitator superfamily MFS_1 protein. (Os12t0639100-02);Similar to nodulin-like protein. (Os12t0639100-03)
Sequence

MLAILPTAITLLLMYFVDVHRSDHQRYNKKFMDAFSLIAITVAGYLMIIIICDQVLKIIS
SAVQTVCFVILLLLVLSPVAIAVKAQKTESMKQEEETRDQAERIGLLQEQISTNASSSSD
ERCQELSTGKENMNLVQAMCKLNFWLLFLAMSCGMGSGLATVNNISQIGGSLGYSTKETS
TLVSLWSIWNFSGRFGAGYISDHFLRSRGVGRPFFIGVTLLVMSLGHAIIASGILASLYV
GSVLVGLCYGCQWALMPSITSEIFGLNHFGTIFNVVAVASPVGSYILSVRVVGYIYDMES
PPGARACSGNHCFVLSFVIMACVCVVGSAVAFMLFVRTRRFYKRVVYARLQSFL

Transcript Sequence

Transcript ID

Os12t0639100-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:27409532:27410657:1 gene:Os12g0639100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAJOR FACILITATOR SUPERFAMILY 8 description:Major facilitator superfamily MFS_1 protein. (Os12t0639100-01);Major facilitator superfamily MFS_1 protein. (Os12t0639100-02);Similar to nodulin-like protein. (Os12t0639100-03)
Sequence

CATACTGATGTTGGCGATATTGCCCACTGCCATCACCCTGCTGCTTATGTATTTTGTCGA
TGTCCACCGTTCTGATCATCAACGGTACAACAAGAAGTTCATGGATGCTTTCTCCCTCAT
TGCCATTACTGTTGCTGGTTATCTAATGATCATCATAATCTGTGACCAAGTATTGAAGAT
AATAAGTTCAGCTGTGCAGACTGTTTGCTTTGTGATACTCCTACTGTTGGTCCTGTCTCC
AGTGGCTATTGCTGTGAAGGCCCAGAAGACAGAATCAATGAAGCAAGAAGAAGAAACCAG
GGATCAAGCTGAAAGAATCGGACTACTCCAAGAGCAAATTAGTACAAATGCCAGCTCCAG
TAGCGATGAGCGATGTCAAGAACTGTCGACAGGCAAAGAAAACATGAATCTGGTGCAGGC
AATGTGCAAGCTGAACTTCTGGCTGCTGTTCCTAGCAATGTCCTGTGGGATGGGATCAGG
GCTTGCAACGGTGAACAACATCAGCCAGATCGGCGGCTCCCTCGGGTACTCGACCAAGGA
GACGAGCACACTGGTGTCACTCTGGAGCATCTGGAACTTCTCAGGGAGGTTTGGTGCCGG
CTACATATCCGACCACTTCCTCCGTTCGCGGGGAGTCGGTCGCCCTTTCTTCATCGGCGT
CACGCTCCTGGTCATGAGCTTGGGCCACGCCATCATCGCCTCCGGCATCCTGGCGTCGCT
CTACGTCGGGTCGGTGCTCGTCGGTCTTTGCTATGGGTGTCAGTGGGCACTGATGCCGAG
CATCACGTCGGAGATATTCGGGCTGAACCATTTCGGCACCATCTTCAACGTGGTGGCGGT
GGCGAGCCCCGTGGGATCTTACATCCTCTCGGTGAGGGTGGTGGGTTACATCTACGACAT
GGAGTCGCCGCCGGGAGCTCGTGCCTGCTCCGGTAACCATTGCTTCGTTTTGTCGTTCGT
CATCATGGCGTGTGTCTGCGTGGTTGGCTCTGCTGTCGCCTTCATGCTCTTCGTCAGGAC
GAGGAGGTTTTATAAACGGGTTGTGTACGCCAGGTTGCAATCTTTTCTATAGAGAGAGAA
ACGAACCGATTCTTTTCTAGCAAATGCTTACCTATCTTTTACAAGC