Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0638600-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:27378828:27382458:1 gene:Os12g0638600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 17_1 description:Mediator complex, subunit Med17 domain containing protein. (Os12t0638600-01)
Sequence	ATGGAGGAAGCCGTGCGGGTGGACCTCGACAAGCTCCCCATCAAGCGCCTCCACGCCATC GACGAGGCCGGCAACGAGCACTACCCGCCCGACACCAGCAGCGAGGAGCAGCGCCTCTCC GCCATCCGCCGCATCGACTTCTCCTGGGTCATCGACAAGGACGCCAAGAAGCCCAAGAAG GACACCGCCCAGCAGCAGCAGCAGCAGGCATGGCCGTGGCAGGGCATGATGGAGAGCCTG CAGCAGGCGCAGCAGGAGCTCTCCGTCGTCATTGACCTCATCTCCACTGTCGAAGCCAAT GATGCAGTGGCAGTCGCTGGGATGCTCAAGCCCAAATCGCTGCCAACCGAAACCTTAGTT GACACCGCAGTCTCTGCAGCCACCAAGCTTCAGCGCGTTCGGCATTTGTCACGCTACTTC AAACAATCTGCCAAAACAATGGAGCAGCAGTTCCAAAAAGAGTCTAGGTTCTATGGCTCA TTAATCAGATTGCAGCAGAACTGGAAAGTGAAGCGGCAACGGTTTGGTGGAAGTGGTCCA GGAAGTGAGGGCTTCATGTTTGATCTGATCGACACTTCTCAATTGGACACAGCAGCAATG CCTCGACTGTCATCATTACCATTGATTCCAATTGACCAAGACTCATCAGGCACTTTGTCC GTACAAGTCCCTCAAAAATCTTGCCGTTTCTTGAGTCTTAATTTTCGAGGGGACAGTGCC AATGGTGTGGAAAACTACGGTCATAAACTGAAAGATGGCATCTCAAGCATCACTTCCTCT GAAACAGACAATGATGATGTCAATAAATCCATCAAACATGCACATTCTATTCTTCGCAAC ATCCACAAGTCAATATTTGAGGAGCAGGTATTTGATATGGTGATCCGTGAGACATTTGTC CAATCTCAAGGCATCAATGTGACTGGAATGCGTGAAGATTTTCTCCAATTAGCTATTGGT CAGGAATGTTCATTGTGCCTCTCGCTTGCTCATTCTGGAGATGGTAGTGACTCAGAAATG GTAGACCATGAAGACCATGCCAATTCAGAGGATGCCTCAAATCTTGTGTTGGTCACTATG AATGGGAAGCTGGACCCTTTAAGAAAAGACGTGACAGGGTTTCCTAATCCCAGAAGTCTG GAAATTTACTTGCTACAATTGTTTCATGAGAACATTCTTAGGAAGGTCAGGGAGAAATCC CTTAACATTGGTCGCTACCAAAGTCCTGCTCAGGTTGCAGGTGATGATTATGGCCTGCTA GGTCATTTCTGCTTGACAGTGGCTCACAGGATATTTTCTAACAAAGTACTCGTGGAGCTT GAGAGTGTGGTCAGCAGGGTTCCATATCTCCATTTGCGTTCTCTTCCTACTTGGCATTCT CGAACTTCCTCCTGGTCTCTATGCTTGAAAGTTCCTCAGCCTATCCTTGCTGCAGATCGG ATTGCAAAGCCTTCTGATAACCATGAACTTAAGTACAAATCCAGGTCACAGTTCAATACT AAGGTGATCGTGAAAGATAGCCAAATTAGTCTAATGGGTGAAGGCTCCCCAAGCATTGCT GGATCATTGACTGGGAAGCCCTCCGATGGATATTTGGTAAATAGCTACAATTGTGACTTG GAGGACCTCCCAACAATGCTTCTGCAGCAGGTTGCTAGTCAAGTAATCCACTGGCTTCAT GAAGAAGCATTGGTTCTCGGTATGAATGTGACTAGAGATTTCCTGTGCCTTTACTTTGAT CTTGAGCAAGGTGAAACGCTTGGCCTGGTGGCGAATGTTGACCCGGACGACACCTGTGGA TGCATTTCTTGGTACCTTACTATTGATCACCCAACGGAGGATGGGAAGATGTCAGCAGAT AGTCAGGAGTTTGAGAAGCGTAGGTTTTTGGGCTATGTTTCTCTTGAAGTATTGTACTCT ACCCTTATGGACCTGATAAATTTGTGTAACGCTGGCGCCCACCACTGA

Peptide Sequence

PEP ID	Os12t0638600-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:27378828:27382458:1 gene:Os12g0638600 transcript:Os12t0638600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 17_1 description:Mediator complex, subunit Med17 domain containing protein. (Os12t0638600-01)
Sequence	MEEAVRVDLDKLPIKRLHAIDEAGNEHYPPDTSSEEQRLSAIRRIDFSWVIDKDAKKPKK DTAQQQQQQAWPWQGMMESLQQAQQELSVVIDLISTVEANDAVAVAGMLKPKSLPTETLV DTAVSAATKLQRVRHLSRYFKQSAKTMEQQFQKESRFYGSLIRLQQNWKVKRQRFGGSGP GSEGFMFDLIDTSQLDTAAMPRLSSLPLIPIDQDSSGTLSVQVPQKSCRFLSLNFRGDSA NGVENYGHKLKDGISSITSSETDNDDVNKSIKHAHSILRNIHKSIFEEQVFDMVIRETFV QSQGINVTGMREDFLQLAIGQECSLCLSLAHSGDGSDSEMVDHEDHANSEDASNLVLVTM NGKLDPLRKDVTGFPNPRSLEIYLLQLFHENILRKVREKSLNIGRYQSPAQVAGDDYGLL GHFCLTVAHRIFSNKVLVELESVVSRVPYLHLRSLPTWHSRTSSWSLCLKVPQPILAADR IAKPSDNHELKYKSRSQFNTKVIVKDSQISLMGEGSPSIAGSLTGKPSDGYLVNSYNCDL EDLPTMLLQQVASQVIHWLHEEALVLGMNVTRDFLCLYFDLEQGETLGLVANVDPDDTCG CISWYLTIDHPTEDGKMSADSQEFEKRRFLGYVSLEVLYSTLMDLINLCNAGAHH

Transcript Sequence

Transcript ID	Os12t0638600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:27378828:27382458:1 gene:Os12g0638600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 17_1 description:Mediator complex, subunit Med17 domain containing protein. (Os12t0638600-01)
Sequence	AAAGTCCAGCACCCAAACTCGATCGAGAATTCGCTCCTCCTCACTCCGCCGCCCGACGAC CTCGCCGGCGGCCGCCCCCACCCCGCCGGCCGCCGCTTCTGCTTCCCGCGGGGGGATCCC TTCCGCTCTTGAGCGGGACTCGTGAGCCCCAAGGCAGTGCCTCCTTCACTCAAAAAATTG TCTCCGATCTAATTAAGCCCTCCGCCGCCGCTGCCTCGCCTTCGCCATGGAGGAAGCCGT GCGGGTGGACCTCGACAAGCTCCCCATCAAGCGCCTCCACGCCATCGACGAGGCCGGCAA CGAGCACTACCCGCCCGACACCAGCAGCGAGGAGCAGCGCCTCTCCGCCATCCGCCGCAT CGACTTCTCCTGGGTCATCGACAAGGACGCCAAGAAGCCCAAGAAGGACACCGCCCAGCA GCAGCAGCAGCAGGCATGGCCGTGGCAGGGCATGATGGAGAGCCTGCAGCAGGCGCAGCA GGAGCTCTCCGTCGTCATTGACCTCATCTCCACTGTCGAAGCCAATGATGCAGTGGCAGT CGCTGGGATGCTCAAGCCCAAATCGCTGCCAACCGAAACCTTAGTTGACACCGCAGTCTC TGCAGCCACCAAGCTTCAGCGCGTTCGGCATTTGTCACGCTACTTCAAACAATCTGCCAA AACAATGGAGCAGCAGTTCCAAAAAGAGTCTAGGTTCTATGGCTCATTAATCAGATTGCA GCAGAACTGGAAAGTGAAGCGGCAACGGTTTGGTGGAAGTGGTCCAGGAAGTGAGGGCTT CATGTTTGATCTGATCGACACTTCTCAATTGGACACAGCAGCAATGCCTCGACTGTCATC ATTACCATTGATTCCAATTGACCAAGACTCATCAGGCACTTTGTCCGTACAAGTCCCTCA AAAATCTTGCCGTTTCTTGAGTCTTAATTTTCGAGGGGACAGTGCCAATGGTGTGGAAAA CTACGGTCATAAACTGAAAGATGGCATCTCAAGCATCACTTCCTCTGAAACAGACAATGA TGATGTCAATAAATCCATCAAACATGCACATTCTATTCTTCGCAACATCCACAAGTCAAT ATTTGAGGAGCAGGTATTTGATATGGTGATCCGTGAGACATTTGTCCAATCTCAAGGCAT CAATGTGACTGGAATGCGTGAAGATTTTCTCCAATTAGCTATTGGTCAGGAATGTTCATT GTGCCTCTCGCTTGCTCATTCTGGAGATGGTAGTGACTCAGAAATGGTAGACCATGAAGA CCATGCCAATTCAGAGGATGCCTCAAATCTTGTGTTGGTCACTATGAATGGGAAGCTGGA CCCTTTAAGAAAAGACGTGACAGGGTTTCCTAATCCCAGAAGTCTGGAAATTTACTTGCT ACAATTGTTTCATGAGAACATTCTTAGGAAGGTCAGGGAGAAATCCCTTAACATTGGTCG CTACCAAAGTCCTGCTCAGGTTGCAGGTGATGATTATGGCCTGCTAGGTCATTTCTGCTT GACAGTGGCTCACAGGATATTTTCTAACAAAGTACTCGTGGAGCTTGAGAGTGTGGTCAG CAGGGTTCCATATCTCCATTTGCGTTCTCTTCCTACTTGGCATTCTCGAACTTCCTCCTG GTCTCTATGCTTGAAAGTTCCTCAGCCTATCCTTGCTGCAGATCGGATTGCAAAGCCTTC TGATAACCATGAACTTAAGTACAAATCCAGGTCACAGTTCAATACTAAGGTGATCGTGAA AGATAGCCAAATTAGTCTAATGGGTGAAGGCTCCCCAAGCATTGCTGGATCATTGACTGG GAAGCCCTCCGATGGATATTTGGTAAATAGCTACAATTGTGACTTGGAGGACCTCCCAAC AATGCTTCTGCAGCAGGTTGCTAGTCAAGTAATCCACTGGCTTCATGAAGAAGCATTGGT TCTCGGTATGAATGTGACTAGAGATTTCCTGTGCCTTTACTTTGATCTTGAGCAAGGTGA AACGCTTGGCCTGGTGGCGAATGTTGACCCGGACGACACCTGTGGATGCATTTCTTGGTA CCTTACTATTGATCACCCAACGGAGGATGGGAAGATGTCAGCAGATAGTCAGGAGTTTGA GAAGCGTAGGTTTTTGGGCTATGTTTCTCTTGAAGTATTGTACTCTACCCTTATGGACCT GATAAATTTGTGTAACGCTGGCGCCCACCACTGACATCTATCTGAATATCCATGTAATAT CACTTACTACCTTGTAGATTGGTCCTTTGCTTAGGCGAATGGAATCCTGTTGGCTGTTGC CCGCTATC