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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0637900-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:27336090:27337780:-1 gene:Os12g0637900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice microspore-preferred 5 description:CHCH domain containing protein. (Os12t0637900-00)
Sequence

ATGGGTCGCGGCGGCCGCGGTGGAGGAGGAGGAGGGAGGTCAAGCTTCCGCGGCAGCAGC
ACGGGCACGAAAGCAGTACCCCGTGCTGCTCCGGCGACCACGCCGGCGGCGAAGAGCACA
GGCACAGCTCCGGCCACCAAGAATACTTCCTCCGGCAGCAATGACTCCGTCATAGGATCC
ATCGGATCTGCTTTCTTTGATGGGTGGGGATGGGGCACGGGTTACGGGATGGTGCAGAGG
GGGATGGACGCCGTCTTCGGCCCTCGCACCGTCAACGTCGTCGACGCCACGTCCACTTCG
TCTTCTCCGGCGCCGGCGGCCGCCGCTGCGGCTCATCCAATGTTGGATGCGTGCGGCGCC
CACAAGAAGGCGTTCCAGGAATGCGTCGCCCAGCAAGGGATCCACGTCAGCAGATGCCAG
CCCTACCTCGACATGCTCAACGACTGCCGCCGGGACTCCGCCGCCTCCGCCGCCGTCGGC
GTTGCCACCACCACCAGAATTCTCTGA

Peptide Sequence

PEP ID

Os12t0637900-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:27336090:27337780:-1 gene:Os12g0637900 transcript:Os12t0637900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice microspore-preferred 5 description:CHCH domain containing protein. (Os12t0637900-00)
Sequence

MGRGGRGGGGGGRSSFRGSSTGTKAVPRAAPATTPAAKSTGTAPATKNTSSGSNDSVIGS
IGSAFFDGWGWGTGYGMVQRGMDAVFGPRTVNVVDATSTSSSPAPAAAAAAHPMLDACGA
HKKAFQECVAQQGIHVSRCQPYLDMLNDCRRDSAASAAVGVATTTRIL

Transcript Sequence

Transcript ID

Os12t0637900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:27336090:27337780:-1 gene:Os12g0637900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice microspore-preferred 5 description:CHCH domain containing protein. (Os12t0637900-00)
Sequence

GTTCGTCACCGAGATCCGACAAACGCCATCCATGGGTCGCGGCGGCCGCGGTGGAGGAGG
AGGAGGGAGGTCAAGCTTCCGCGGCAGCAGCACGGGCACGAAAGCAGTACCCCGTGCTGC
TCCGGCGACCACGCCGGCGGCGAAGAGCACAGGCACAGCTCCGGCCACCAAGAATACTTC
CTCCGGCAGCAATGACTCCGTCATAGGATCCATCGGATCTGCTTTCTTTGATGGGTGGGG
ATGGGGCACGGGTTACGGGATGGTGCAGAGGGGGATGGACGCCGTCTTCGGCCCTCGCAC
CGTCAACGTCGTCGACGCCACGTCCACTTCGTCTTCTCCGGCGCCGGCGGCCGCCGCTGC
GGCTCATCCAATGTTGGATGCGTGCGGCGCCCACAAGAAGGCGTTCCAGGAATGCGTCGC
CCAGCAAGGGATCCACGTCAGCAGATGCCAGCCCTACCTCGACATGCTCAACGACTGCCG
CCGGGACTCCGCCGCCTCCGCCGCCGTCGGCGTTGCCACCACCACCAGAATTCTCTGATG
GATGGATCGCCTGCCAGCCTGATGCATCATATCCATGATAGCAATGCAATCCATCGATTG
ATTAAATTAGTTTGATTGCTTGTTTATTTATATCCGTTTTGCAGCCACACGTAATAATAA
TAATCATGCGACGCTGTATGCTACTGCATGGATGGACCTTAATAAGTTAAGTTAATTTAT
TTGCTTCGATC