Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0636200-03
CDS Infomation	cds chromosome:IRGSP-1.0:12:27271747:27274075:-1 gene:Os12g0636200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Prep (Fragment). (Os12t0636200-01);Similar to Benzothiadiazole-induced homeodomain protein 1. (Os12t0636200-02);Similar to Benzothiadiazole-induced homeodomain protein 1. (Os12t0636200-03)
Sequence	ATGTTGATGCATATGATGGATGGAGCACAAGGTAGTGGCTCTGAGCTCATCCATGATGAT GCCCACACTGGTTCACAGCTTGAGTTTGGTGTTCTGAATAATCACAACTCATCAAGTGTT CCATCAATGCAAAGCCAAGGGCTATCTCTGAGCTTGAACACACAAATCATGGCGCCTTCC TTACCGTACTGGTCTATAAAGCCAGACATGTTAACGCCGCAGTCTTACCATGACAACCTT AGAGGGGAAGACATGCGGATGAAGAATTTGCAGTCCGAAGCTTCACGCGCAATCCGGAAC TCAAGGTATCTCAAGGCAGCACAAGAACTGCTTGATGAGGTCGTGAGTGTTTGGAAGAGC ATAAAACAAAAGGCTCAGAAAGAGAAGGTTGAATCAGGAAAAGCAGATGGCAAAGAGACT GATGGAGGGCCAAAAAGTGAGGGTGTATCTTCTAATCCACAAGAATCTGGCGCTAATGCA GCACCTGAGCTTTCCACTGCTGAGAAGCAAGAGCTTCAGAACAAAATGGCAAAACTGATG GCAATGTTGGATGAGGTGGACCGGAAATACAAGCATTATTACCACCAAATGCAAACCGTG GTTTCATCGTTTGATGTGGTAGCTGGACCAGGATCTGCGAAGCCTTACACAGCAGTTGCT CTTCAGACAATCTCACGGCACTTTCGGTGCCTGAAGGATGCTATCAATGATCAGATCAAT GTTATCAGGAAAAAGCTTGGCGAGGAAGAGAACTCATCTGGCAAGGAGGGAAAATTAACC CGCCTCCGGTACATTGATCAGCAGCTAAGGCAACAACGTGCTTTCCAACAGTACGGTATG ATTCCACAAAACGCCTGGAGACCACAGAGGGGACTGCCTGAAAACTCTGTTACAATTCTT CGCGCTTGGCTGTTTGAACACTTCCTCCATCCGTACCCAAAAGATTCCGAGAAGTTAATG CTTGCTAGGCAGACTGGCCTGACTAGGAGTCAGATTTCGAATTGGTTCATAAATGCCCGT GTCCGCCTTTGGAAACCAATGATTGAAGACATGTACAAAGAAGAGATTGGTGATTTAGAG CAAGACTCCAACTCTTCCTCTGACAATGCACCAAGAAGTAAGGATAAAATGGCATCTTCA GAAGACAAGGAGGATCTCAAAAACTCCAGGGCACGGATTTGCGAAACAAGCCAATTGAGC GAGTCGAGAACCAGCATTGGAGCAATGAATGTTGGCGGAGCGCCTGTTGGCTTCCAGAAT GAGCCCAATCCTGATGACAGTTTCATGAACCTGATGCTGAAGGACCAGCGATCGAACGAA GTGGATGGCGGCCTCCTTCTCCACAACACTGTCGCGCAGCACTCAGACGAGAACGCCCGG TTCATGGCCTATCACTTGGCAGAGCTTGGGAGATACGGCAATGGCAATGTGTCGCTGACA CTGGGCTTGCAGCACTCCAGCAGCAACCTCGTTCCTAATGCTCAGCCAGGTTTCCCTGGT GTTAATGAGGATGACATCTACAATGCTACTGCTCCTCTTGGTGTCACCGTCGCATCTTCG GACTATGATTCGATGAATCAGATGGATCAACGGCAACGGTTTGAGCATTCACCTCTTCTG CATGATTTTGTGGCCTGA

Peptide Sequence

PEP ID	Os12t0636200-03
PEP Infomation	pep chromosome:IRGSP-1.0:12:27271747:27274075:-1 gene:Os12g0636200 transcript:Os12t0636200-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Prep (Fragment). (Os12t0636200-01);Similar to Benzothiadiazole-induced homeodomain protein 1. (Os12t0636200-02);Similar to Benzothiadiazole-induced homeodomain protein 1. (Os12t0636200-03)
Sequence	MLMHMMDGAQGSGSELIHDDAHTGSQLEFGVLNNHNSSSVPSMQSQGLSLSLNTQIMAPS LPYWSIKPDMLTPQSYHDNLRGEDMRMKNLQSEASRAIRNSRYLKAAQELLDEVVSVWKS IKQKAQKEKVESGKADGKETDGGPKSEGVSSNPQESGANAAPELSTAEKQELQNKMAKLM AMLDEVDRKYKHYYHQMQTVVSSFDVVAGPGSAKPYTAVALQTISRHFRCLKDAINDQIN VIRKKLGEEENSSGKEGKLTRLRYIDQQLRQQRAFQQYGMIPQNAWRPQRGLPENSVTIL RAWLFEHFLHPYPKDSEKLMLARQTGLTRSQISNWFINARVRLWKPMIEDMYKEEIGDLE QDSNSSSDNAPRSKDKMASSEDKEDLKNSRARICETSQLSESRTSIGAMNVGGAPVGFQN EPNPDDSFMNLMLKDQRSNEVDGGLLLHNTVAQHSDENARFMAYHLAELGRYGNGNVSLT LGLQHSSSNLVPNAQPGFPGVNEDDIYNATAPLGVTVASSDYDSMNQMDQRQRFEHSPLL HDFVA

Transcript Sequence

Transcript ID	Os12t0636200-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:27271747:27274075:-1 gene:Os12g0636200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Prep (Fragment). (Os12t0636200-01);Similar to Benzothiadiazole-induced homeodomain protein 1. (Os12t0636200-02);Similar to Benzothiadiazole-induced homeodomain protein 1. (Os12t0636200-03)
Sequence	GATGTTGATGCATATGATGGATGGAGCACAAGGTAGTGGCTCTGAGCTCATCCATGATGA TGCCCACACTGGTTCACAGCTTGAGTTTGGTGTTCTGAATAATCACAACTCATCAAGTGT TCCATCAATGCAAAGCCAAGGGCTATCTCTGAGCTTGAACACACAAATCATGGCGCCTTC CTTACCGTACTGGTCTATAAAGCCAGACATGTTAACGCCGCAGTCTTACCATGACAACCT TAGAGGGGAAGACATGCGGATGAAGAATTTGCAGTCCGAAGCTTCACGCGCAATCCGGAA CTCAAGGTATCTCAAGGCAGCACAAGAACTGCTTGATGAGGTCGTGAGTGTTTGGAAGAG CATAAAACAAAAGGCTCAGAAAGAGAAGGTTGAATCAGGAAAAGCAGATGGCAAAGAGAC TGATGGAGGGCCAAAAAGTGAGGGTGTATCTTCTAATCCACAAGAATCTGGCGCTAATGC AGCACCTGAGCTTTCCACTGCTGAGAAGCAAGAGCTTCAGAACAAAATGGCAAAACTGAT GGCAATGTTGGATGAGGTGGACCGGAAATACAAGCATTATTACCACCAAATGCAAACCGT GGTTTCATCGTTTGATGTGGTAGCTGGACCAGGATCTGCGAAGCCTTACACAGCAGTTGC TCTTCAGACAATCTCACGGCACTTTCGGTGCCTGAAGGATGCTATCAATGATCAGATCAA TGTTATCAGGAAAAAGCTTGGCGAGGAAGAGAACTCATCTGGCAAGGAGGGAAAATTAAC CCGCCTCCGGTACATTGATCAGCAGCTAAGGCAACAACGTGCTTTCCAACAGTACGGTAT GATTCCACAAAACGCCTGGAGACCACAGAGGGGACTGCCTGAAAACTCTGTTACAATTCT TCGCGCTTGGCTGTTTGAACACTTCCTCCATCCGTACCCAAAAGATTCCGAGAAGTTAAT GCTTGCTAGGCAGACTGGCCTGACTAGGAGTCAGATTTCGAATTGGTTCATAAATGCCCG TGTCCGCCTTTGGAAACCAATGATTGAAGACATGTACAAAGAAGAGATTGGTGATTTAGA GCAAGACTCCAACTCTTCCTCTGACAATGCACCAAGAAGTAAGGATAAAATGGCATCTTC AGAAGACAAGGAGGATCTCAAAAACTCCAGGGCACGGATTTGCGAAACAAGCCAATTGAG CGAGTCGAGAACCAGCATTGGAGCAATGAATGTTGGCGGAGCGCCTGTTGGCTTCCAGAA TGAGCCCAATCCTGATGACAGTTTCATGAACCTGATGCTGAAGGACCAGCGATCGAACGA AGTGGATGGCGGCCTCCTTCTCCACAACACTGTCGCGCAGCACTCAGACGAGAACGCCCG GTTCATGGCCTATCACTTGGCAGAGCTTGGGAGATACGGCAATGGCAATGTGTCGCTGAC ACTGGGCTTGCAGCACTCCAGCAGCAACCTCGTTCCTAATGCTCAGCCAGGTTTCCCTGG TGTTAATGAGGATGACATCTACAATGCTACTGCTCCTCTTGGTGTCACCGTCGCATCTTC GGACTATGATTCGATGAATCAGATGGATCAACGGCAACGGTTTGAGCATTCACCTCTTCT GCATGATTTTGTGGCCTGAAGACAGCAGAGAAACAATCAGGACCATGGACATTAAGAGAG AGAATTGGGGGGCAGCATTTGTAACACCTAGTGGGAGAATAACATGCCTGAAAGGGCATG GGATTTGTAGCTTTGTAGTTGCCATTTAATACAGAAGAGGAGGTATAGCAGGAAATGTAA TATAAGGTTAGATGGTGGGGGTGATAGGGTAAAGAATCATATGTAAAGATAAAATCCATC ATTACTATATATATATACGTGTAAAAGCTTGTGATTTG