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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0635700-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:27249717:27250880:-1 gene:Os12g0635700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GNS1/SUR4 membrane protein. (Os12t0635700-01)
Sequence

ATGGCCGCCGCCACCTCCACCGCCGCCTACTGGCTCGCCGAGCACCCGGCAATCGTGTCC
TTCAGGTGGAGCCCCACGGGGCTGTGGTTCTCCACCTGGGCCTTCCTCCTCGGCTTCCTC
GCCTCCTACGTCGCGCTCTGCCTCGCCCTCGACGCCATCCTCGCCGCCCTTTTGCGCCGC
CGGAGGCCGCTCCCGCTGGGGCCCTTGCCCGCGGCCCACGCGCTCCTGATGGCCGCCGTC
TCCGCCGCCATCTTCGCCGGCACGCTGCTCTCCGCGCTCGCCGAGATACGCGACACGCGG
TGGTCGTGGCGCGGACGGAGCCGCACCACCCCGTTCCGCTGGCTCCTCTGCTTCCCGCCG
GGGACGCGCTCCTCCGGCCGCGTCTTCTTCTGGTCCTACGCATACTACCTCTCCCGCTAC
CTCCACGCCGCGCGGGGGCTCTTCGCCGTGCTGCAACGCCGTCGCGGCGCCGCGGCGAGG
GTGTTCGCGCACGCGGCATCCGTCGCCATGGCCTTCCTCTGGCTCGAGTTCTCGCAGTCG
TTCCAGGTGCTCGCCATCCTCGCCTCCACGCTCGCCCACGCCGTCGCCTTCGGGTTCCGC
TTCTGGGTCGGCGCCGGCCTCCCCGCCGCCCGTGGCGCCCCCGTCGCGCTCGCCTGCCAG
TGCGCGCTCCTCGGGTGCAACCTCCTCTGCCACGTCGGCGTCGTGTGGATGCACTTCGGC
GGCGTCGCCGGCGGCGGGTGCAGCGGCATCGGCGCCTGGGTCTTCAACACCCTCCTCAAC
GCCGCGCTCCTCTGGGTCTTCTTGCATTGCTACGGCAAGCGCGGCGTCTGCGACGACGAC
GGCGGCGCCACCGCCGCCAGCGCGCGCCACGACAAGGACCTATGA

Peptide Sequence

PEP ID

Os12t0635700-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:27249717:27250880:-1 gene:Os12g0635700 transcript:Os12t0635700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GNS1/SUR4 membrane protein. (Os12t0635700-01)
Sequence

MAAATSTAAYWLAEHPAIVSFRWSPTGLWFSTWAFLLGFLASYVALCLALDAILAALLRR
RRPLPLGPLPAAHALLMAAVSAAIFAGTLLSALAEIRDTRWSWRGRSRTTPFRWLLCFPP
GTRSSGRVFFWSYAYYLSRYLHAARGLFAVLQRRRGAAARVFAHAASVAMAFLWLEFSQS
FQVLAILASTLAHAVAFGFRFWVGAGLPAARGAPVALACQCALLGCNLLCHVGVVWMHFG
GVAGGGCSGIGAWVFNTLLNAALLWVFLHCYGKRGVCDDDGGATAASARHDKDL

Transcript Sequence

Transcript ID

Os12t0635700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:27249717:27250880:-1 gene:Os12g0635700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GNS1/SUR4 membrane protein. (Os12t0635700-01)
Sequence

ATCCACCCGACCACACGCCGACGCCGACGCCGACGACCATGGCCGCCGCCACCTCCACCG
CCGCCTACTGGCTCGCCGAGCACCCGGCAATCGTGTCCTTCAGGTGGAGCCCCACGGGGC
TGTGGTTCTCCACCTGGGCCTTCCTCCTCGGCTTCCTCGCCTCCTACGTCGCGCTCTGCC
TCGCCCTCGACGCCATCCTCGCCGCCCTTTTGCGCCGCCGGAGGCCGCTCCCGCTGGGGC
CCTTGCCCGCGGCCCACGCGCTCCTGATGGCCGCCGTCTCCGCCGCCATCTTCGCCGGCA
CGCTGCTCTCCGCGCTCGCCGAGATACGCGACACGCGGTGGTCGTGGCGCGGACGGAGCC
GCACCACCCCGTTCCGCTGGCTCCTCTGCTTCCCGCCGGGGACGCGCTCCTCCGGCCGCG
TCTTCTTCTGGTCCTACGCATACTACCTCTCCCGCTACCTCCACGCCGCGCGGGGGCTCT
TCGCCGTGCTGCAACGCCGTCGCGGCGCCGCGGCGAGGGTGTTCGCGCACGCGGCATCCG
TCGCCATGGCCTTCCTCTGGCTCGAGTTCTCGCAGTCGTTCCAGGTGCTCGCCATCCTCG
CCTCCACGCTCGCCCACGCCGTCGCCTTCGGGTTCCGCTTCTGGGTCGGCGCCGGCCTCC
CCGCCGCCCGTGGCGCCCCCGTCGCGCTCGCCTGCCAGTGCGCGCTCCTCGGGTGCAACC
TCCTCTGCCACGTCGGCGTCGTGTGGATGCACTTCGGCGGCGTCGCCGGCGGCGGGTGCA
GCGGCATCGGCGCCTGGGTCTTCAACACCCTCCTCAACGCCGCGCTCCTCTGGGTCTTCT
TGCATTGCTACGGCAAGCGCGGCGTCTGCGACGACGACGGCGGCGCCACCGCCGCCAGCG
CGCGCCACGACAAGGACCTATGAGGTGAACCACCACCCACCATGCATCCTTGTAACATGT
TCCTCACTACTCTACTACTTAGATTGTAAATAGGTGTGGCGTCCAAACGGGGATCGAAGA
GATTAACATGACACAAAAAAAAAATCAACAAACAAAGATGGGATTGGTGTAGGAGCAATT
CGATGATCCAATCCCTGCTTACTTCTACTTCTTAGTGCTATGTTGTTATTGTGTTGTTCA
TGTCAGTAAAAGAAGAAATTTTGC