Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0635500-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:27243709:27246146:1 gene:Os12g0635500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF266, plant domain containing protein. (Os12t0635500-01)
Sequence

ATGCAAGGAGGGGTAGCGATGGTGGTGACAGTGAACGGCGGCAATGGCAAGGACAGCTTC
GGCAACATGGCGAGGCCGCCGTCGAGGAGCCTCCTCCCCCTCAAGCTCCTCAAGCCGTTC
CTCATCTTCGCCGTGCTCGCCACCGGCTTCCTCGCCGCCGCCGCAGCCGCCCTCCTCCTC
CTCGGCGGCGGCGCTGGCGCCTCCTACGTCCCCAACGTCCTCTCGGCAACGGCGTGGCAG
CAGCAGCCGCGGTGCGCGCAGCAGCAGGAGGACGGCGGGCGGGCGGCGCTGGAGCGGTGG
ACGCGGCTACCGGCGGCGAGCGCCTGGCACAACATGAGCGACGAGGAGCTGCTCTGGGCG
GCGTCGATGGAGCCGCGGGTGCGGCGGTATCCGTACCGGCGGGTGCCCAAGGTGGCGTTC
ATGTTCCTCACGCGTGGGCCGCTGCCATTGGCGCCGCTCTGGGAGAGGTTCTTCAATGGC
AGCGGCGGCCGGGAGCTCTTCTCCATCTATGTCCACTCCACGCCCGGATACAACCCCGAC
TTCCCGACAACCTCCGTCTTCTACCGCCGCCAGGTGCCCAGCCAGGTGGCGCAATGGGGG
CAGACGAACATGTTCGACGCGGAGCGGCGGCTGCTGGCGAACGCGCTGCTGGACGGCGGC
AACGAGCGCTTCGTGCTCGTCTCCGAGTCGTGCGTGCCGCTGCACGGCTTCCCGGCGGTG
TACGGCTACCTGACCGCCTCCCGCCACAGCTTCGTCGGCGCCTTCGACGACCCGGGCCCG
CACGGCCGCGGCCGCTACAGGGCGGGGCTGGCGCCGGAGGTGTCGCCGGAGCAGTGGCGC
AAGGGCGCGCAGTGGTTCGAGGTGGACCGGTCGCTGGCCGTGTTCGTCGTCGGCGACGAG
CGGTACTACCCGAGGTTCCGGGAGCTGTGCCGGCCGCCGTGCTACGTGGACGAGCACTAC
CTGCCGACGGTGCTGTCCATCGAGGCGGCGGGGCGGATCGCGAACCGGAGCGTGACGTGG
GTGGACTGGTCGCGCGGCGGCGCGCACCCGGCGACGTTCGGCGGCGCGGACGTCGGCGAG
GCGTGGGTGAGGAAGGCGGCGGCGGGGCAGAGGTGCCTGTACAACGGCCAGCCGTCGGAG
GTGTGCTTCCTCTTCGCGAGGAAGTTGGCGCCAAGCGCGCTGCAGCCGCTGCTCGCGCTC
CCGCCAACGCTGCTCGGCTACTAG

Peptide Sequence

PEP ID

Os12t0635500-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:27243709:27246146:1 gene:Os12g0635500 transcript:Os12t0635500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF266, plant domain containing protein. (Os12t0635500-01)
Sequence

MQGGVAMVVTVNGGNGKDSFGNMARPPSRSLLPLKLLKPFLIFAVLATGFLAAAAAALLL
LGGGAGASYVPNVLSATAWQQQPRCAQQQEDGGRAALERWTRLPAASAWHNMSDEELLWA
ASMEPRVRRYPYRRVPKVAFMFLTRGPLPLAPLWERFFNGSGGRELFSIYVHSTPGYNPD
FPTTSVFYRRQVPSQVAQWGQTNMFDAERRLLANALLDGGNERFVLVSESCVPLHGFPAV
YGYLTASRHSFVGAFDDPGPHGRGRYRAGLAPEVSPEQWRKGAQWFEVDRSLAVFVVGDE
RYYPRFRELCRPPCYVDEHYLPTVLSIEAAGRIANRSVTWVDWSRGGAHPATFGGADVGE
AWVRKAAAGQRCLYNGQPSEVCFLFARKLAPSALQPLLALPPTLLGY

Transcript Sequence

Transcript ID

Os12t0635500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:27243709:27246146:1 gene:Os12g0635500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF266, plant domain containing protein. (Os12t0635500-01)
Sequence

AATCTCCTTCTTTCCTCTGCTTTCCTCTAAATGTCCAGATGGTACCACCACCCAAGTACT
CCGATTTTTTCAGCTCGGCGATTGAGGAAGATCTTCTCATCATCACCACCACCGTGCTAC
CCTAGCCTAACCTAGAGGCCTTCAACCTCTGCTCGATCGATCTGCTGCTGCTTCTCCAAG
GCGAGCTTCGTGATCAAAGCATGCAAGGAGGGGTAGCGATGGTGGTGACAGTGAACGGCG
GCAATGGCAAGGACAGCTTCGGCAACATGGCGAGGCCGCCGTCGAGGAGCCTCCTCCCCC
TCAAGCTCCTCAAGCCGTTCCTCATCTTCGCCGTGCTCGCCACCGGCTTCCTCGCCGCCG
CCGCAGCCGCCCTCCTCCTCCTCGGCGGCGGCGCTGGCGCCTCCTACGTCCCCAACGTCC
TCTCGGCAACGGCGTGGCAGCAGCAGCCGCGGTGCGCGCAGCAGCAGGAGGACGGCGGGC
GGGCGGCGCTGGAGCGGTGGACGCGGCTACCGGCGGCGAGCGCCTGGCACAACATGAGCG
ACGAGGAGCTGCTCTGGGCGGCGTCGATGGAGCCGCGGGTGCGGCGGTATCCGTACCGGC
GGGTGCCCAAGGTGGCGTTCATGTTCCTCACGCGTGGGCCGCTGCCATTGGCGCCGCTCT
GGGAGAGGTTCTTCAATGGCAGCGGCGGCCGGGAGCTCTTCTCCATCTATGTCCACTCCA
CGCCCGGATACAACCCCGACTTCCCGACAACCTCCGTCTTCTACCGCCGCCAGGTGCCCA
GCCAGGTGGCGCAATGGGGGCAGACGAACATGTTCGACGCGGAGCGGCGGCTGCTGGCGA
ACGCGCTGCTGGACGGCGGCAACGAGCGCTTCGTGCTCGTCTCCGAGTCGTGCGTGCCGC
TGCACGGCTTCCCGGCGGTGTACGGCTACCTGACCGCCTCCCGCCACAGCTTCGTCGGCG
CCTTCGACGACCCGGGCCCGCACGGCCGCGGCCGCTACAGGGCGGGGCTGGCGCCGGAGG
TGTCGCCGGAGCAGTGGCGCAAGGGCGCGCAGTGGTTCGAGGTGGACCGGTCGCTGGCCG
TGTTCGTCGTCGGCGACGAGCGGTACTACCCGAGGTTCCGGGAGCTGTGCCGGCCGCCGT
GCTACGTGGACGAGCACTACCTGCCGACGGTGCTGTCCATCGAGGCGGCGGGGCGGATCG
CGAACCGGAGCGTGACGTGGGTGGACTGGTCGCGCGGCGGCGCGCACCCGGCGACGTTCG
GCGGCGCGGACGTCGGCGAGGCGTGGGTGAGGAAGGCGGCGGCGGGGCAGAGGTGCCTGT
ACAACGGCCAGCCGTCGGAGGTGTGCTTCCTCTTCGCGAGGAAGTTGGCGCCAAGCGCGC
TGCAGCCGCTGCTCGCGCTCCCGCCAACGCTGCTCGGCTACTAGAATTTTTTTCTACTAC
TACTCTCATCAGTTACGTATAGATGTACGTACTGTACGTCTCTCACTCAAATGTCTACAT
TATATATACGATGTATACTCACATCACAGAAATTTTTTGAGCGGTAATATATAAAATTTT
TTATACTCC