Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0633000-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:27128175:27131959:-1 gene:Os12g0633000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xylulose kinase. (Os12t0633000-01)
Sequence	ATGGCCATGGCGGCTGATGGTGATCACTGCCGCCTCCCCGACGACTCCCTCTTCCTCGGC TTCGATTGCTCCACGCAGTCGCTGAAAGCCACGGTGCTGGACGCCGGCCTCACCGCCGTC GCCCACGACGCCGTCCACTTCGACTCCGACCTGCCGCACTACGCCACCCATGGCGGCGTC CTCCGGGACCCATCCGGCGGCGACCCGGGCCGCGTCGTGTCGCCGCCGCTCATGTGGGCC GAGGCGCTGGACCTGCTGCTCGCCAGGCTCGCGCCCAGGGTGGACTACGCCCGCGTCGCC GCCGTCTCCGGCGGCGCGCAGCAGCACGGCAGCGTCTACTGGAAGCGCGGCGCGGCGGCG GTGCTCGCGTCCCTCGACCCGGCCAGGGGCCTGGCACCGCAGCTCGCCGCGGCGCTCGCC ACGACGGAGTCGCCGGTGTGGATGGACAGCAGCACGGCGGCGCAGTGCCGGGAGGTGGAG GCGGCGGTCGGCGGCGCGCTGGAGCTGGCCAGGATGACCGGGTGCCGCGCGCACGAGCGG TGCACAGGCCCGCAGATCAGGAAGATGTACCAGGCGAGGCGGCGCGTGTACGACGACACC GAGAGGATCTCGCTCGTGAGCTCGTTCATGGCGTCGCTGCTCGTCGGCGGCTACGCCTGC ATCGACGAGACCGACGGCGCGGGGATGAACTTGATGGACATCACCACGCGCGAGTTGCGC AGGGACGCCCTTGAGGCTACTGCTCCTGATTTAGAAGACAAGATTGGGAAGCTAGCACCG GCGCATGCTGTTGCAGGAACTTTATCTCCTTATTTCGTTCAGAGATTTCAGTTTTCAAGC AACTGTCTAGTTGTTCAGTGGTCAGGGGACAACCCCAACAGCCTTGCAGGTTTAACTTTG AGCGATCCTGGTGATCTAGCAATCAGTCTTGGGACAAGTGATACAGTTTTTGGGATAACT GATTTACCTGAACCATCCCTGGATGGGAACATCCTCCCTAACCCAGTGGACCCCAAGACA TATATGGTTATGCTTTGCTACAAAAATGGCTCTCTAACACGGGAAGATGTCCGCAATCGT TATGCTGACGGGTCATGGGATGTGTTCAACAAGCATTTGGAGAATACAGCTCCTTTAAAT GGAAGAAAATTGGGATATTACTACAATGAGCCTGAGATTCTGCCACCACTTCCAGTTGGG TTTCACCGTTACGTTGTCAGCTCCTCAGCCAGTGGATCTTTAGATGAGATGGTGGAGCAT CAGATAAACCAGTTTGATCCTCCTTCAGAAGTCCGTGCAATAATAGAAGGGCAGTTCCTG TCCATGAGGGGCCATGCTGAAAGGTGTGGTCTGCCAGTGCCTCCAAAGCGGATTATAGCG ACCGGTGGAGCATCGTCGAACCAGATCATTCTCAAGACGATGGCATCCATTTTTGGCTGC TCGGTTTACACCGTCCAAAGACCAGACTCTGCCTCACTGGGTGCTGCTCTTAGAGCAGCC CATGGGTGGATTTGCAACCAGAAAGGCAAGTTTGTGCCTGTTTCATGTCTGCACTCGGAC AGACTGAATAGAACATCACTAAGCATTAAGCTGGCTGCTCCATTTGGAGACTCGGAGGAG GACATTGACCTTCTGAACAACTACACGTTGTTGATGAAGAAAAGGCTGGAGATTGAACAG AAGCTTGTCGAGAAGTTTGGTCGACATTCATGA

Peptide Sequence

PEP ID	Os12t0633000-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:27128175:27131959:-1 gene:Os12g0633000 transcript:Os12t0633000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xylulose kinase. (Os12t0633000-01)
Sequence	MAMAADGDHCRLPDDSLFLGFDCSTQSLKATVLDAGLTAVAHDAVHFDSDLPHYATHGGV LRDPSGGDPGRVVSPPLMWAEALDLLLARLAPRVDYARVAAVSGGAQQHGSVYWKRGAAA VLASLDPARGLAPQLAAALATTESPVWMDSSTAAQCREVEAAVGGALELARMTGCRAHER CTGPQIRKMYQARRRVYDDTERISLVSSFMASLLVGGYACIDETDGAGMNLMDITTRELR RDALEATAPDLEDKIGKLAPAHAVAGTLSPYFVQRFQFSSNCLVVQWSGDNPNSLAGLTL SDPGDLAISLGTSDTVFGITDLPEPSLDGNILPNPVDPKTYMVMLCYKNGSLTREDVRNR YADGSWDVFNKHLENTAPLNGRKLGYYYNEPEILPPLPVGFHRYVVSSSASGSLDEMVEH QINQFDPPSEVRAIIEGQFLSMRGHAERCGLPVPPKRIIATGGASSNQIILKTMASIFGC SVYTVQRPDSASLGAALRAAHGWICNQKGKFVPVSCLHSDRLNRTSLSIKLAAPFGDSEE DIDLLNNYTLLMKKRLEIEQKLVEKFGRHS

Transcript Sequence

Transcript ID	Os12t0633000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:27128175:27131959:-1 gene:Os12g0633000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xylulose kinase. (Os12t0633000-01)
Sequence	GAGTTCGACTCTCAACGAAAGCATTTTGATTATTCTTTTTGGATTCTTTTGTTTTTTGTT CTTGTTGTGATCGGCTGGCTGCCACATCTTCTTCATCTGATTGAGCTCAACTGCTTGAGC ATCCATGGCCATGGCGGCTGATGGTGATCACTGCCGCCTCCCCGACGACTCCCTCTTCCT CGGCTTCGATTGCTCCACGCAGTCGCTGAAAGCCACGGTGCTGGACGCCGGCCTCACCGC CGTCGCCCACGACGCCGTCCACTTCGACTCCGACCTGCCGCACTACGCCACCCATGGCGG CGTCCTCCGGGACCCATCCGGCGGCGACCCGGGCCGCGTCGTGTCGCCGCCGCTCATGTG GGCCGAGGCGCTGGACCTGCTGCTCGCCAGGCTCGCGCCCAGGGTGGACTACGCCCGCGT CGCCGCCGTCTCCGGCGGCGCGCAGCAGCACGGCAGCGTCTACTGGAAGCGCGGCGCGGC GGCGGTGCTCGCGTCCCTCGACCCGGCCAGGGGCCTGGCACCGCAGCTCGCCGCGGCGCT CGCCACGACGGAGTCGCCGGTGTGGATGGACAGCAGCACGGCGGCGCAGTGCCGGGAGGT GGAGGCGGCGGTCGGCGGCGCGCTGGAGCTGGCCAGGATGACCGGGTGCCGCGCGCACGA GCGGTGCACAGGCCCGCAGATCAGGAAGATGTACCAGGCGAGGCGGCGCGTGTACGACGA CACCGAGAGGATCTCGCTCGTGAGCTCGTTCATGGCGTCGCTGCTCGTCGGCGGCTACGC CTGCATCGACGAGACCGACGGCGCGGGGATGAACTTGATGGACATCACCACGCGCGAGTT GCGCAGGGACGCCCTTGAGGCTACTGCTCCTGATTTAGAAGACAAGATTGGGAAGCTAGC ACCGGCGCATGCTGTTGCAGGAACTTTATCTCCTTATTTCGTTCAGAGATTTCAGTTTTC AAGCAACTGTCTAGTTGTTCAGTGGTCAGGGGACAACCCCAACAGCCTTGCAGGTTTAAC TTTGAGCGATCCTGGTGATCTAGCAATCAGTCTTGGGACAAGTGATACAGTTTTTGGGAT AACTGATTTACCTGAACCATCCCTGGATGGGAACATCCTCCCTAACCCAGTGGACCCCAA GACATATATGGTTATGCTTTGCTACAAAAATGGCTCTCTAACACGGGAAGATGTCCGCAA TCGTTATGCTGACGGGTCATGGGATGTGTTCAACAAGCATTTGGAGAATACAGCTCCTTT AAATGGAAGAAAATTGGGATATTACTACAATGAGCCTGAGATTCTGCCACCACTTCCAGT TGGGTTTCACCGTTACGTTGTCAGCTCCTCAGCCAGTGGATCTTTAGATGAGATGGTGGA GCATCAGATAAACCAGTTTGATCCTCCTTCAGAAGTCCGTGCAATAATAGAAGGGCAGTT CCTGTCCATGAGGGGCCATGCTGAAAGGTGTGGTCTGCCAGTGCCTCCAAAGCGGATTAT AGCGACCGGTGGAGCATCGTCGAACCAGATCATTCTCAAGACGATGGCATCCATTTTTGG CTGCTCGGTTTACACCGTCCAAAGACCAGACTCTGCCTCACTGGGTGCTGCTCTTAGAGC AGCCCATGGGTGGATTTGCAACCAGAAAGGCAAGTTTGTGCCTGTTTCATGTCTGCACTC GGACAGACTGAATAGAACATCACTAAGCATTAAGCTGGCTGCTCCATTTGGAGACTCGGA GGAGGACATTGACCTTCTGAACAACTACACGTTGTTGATGAAGAAAAGGCTGGAGATTGA ACAGAAGCTTGTCGAGAAGTTTGGTCGACATTCATGAAGCATTTGTGTATTTGTGCTAGA ACTTAATGCGGCGGTCCCAAAGTCTCAACAGTGGACTGTTCTCCAGCAGAGTAGTTCGGC ATTTCTCCGATTATTGTCGCCTTATAAACAAAACAAATAGAAAACAATGGGCTACTGTAA ACAGAGATTGAATCAAAAGTAAAGTAGTTGTACAATATAGATACCAGGTTACAGTTGTCA TGAAAATTATGAGTTAGGTCAGCAGTCACATTTTGTGAAGTGTTTTTATTCAATATCCAA TGGATCGTCAAATTCAGACC