Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0632600-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:27088697:27091800:1 gene:Os12g0632600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 021 description:Similar to Helix-loop-helix DNA-binding domain containing protein. (Os12t0632600-00)
Sequence	ATGGATGACTCGAGCTTCTTCATGCAGTGGGCGATGGACACGCTGCACCAGCTCCCCTCC GACTCCACCGCCGCCGCAGCCTACGCCACTGACGTCGCCGGCGACAGCGGCGCCTTCCCG TCGCTGCAAGCTCTCCGCAACGCCTCGGCGGCCGGCGGCGGCGGCGGATTCCGGGACCTG ACAGTGCAGGTGGACCAGGTCCACCGCGCCAACAGCTGGAGCTCCAGCGACAGCCCAGGC GGCGGCGCTGCCACGGCCGCCGCCGGGTGGTCCCCGCATGTCACCGGCGGCGGCGGCAGG GGGCACAGGCCGATGAGCTGGAACTTCAGCGCGGCGTCGGCGCAGCCGACCACCGAGGAT AGCGGCGGTGGAGGCGGCGGCGGAGTAGTTCCGGCGCCGCTGCAGGCGATGGAGACTACC GCGACAGCGAGAGCGGCGGTGAAGAAAGGAGGAGGCGGCGGGTCGTCGTCGTCGGCGGCG GCGCCGGGATACGTGCAGGACCACATAATCGCGGAGCGGCGGCGGCGGGAGAAGATCAAC CAGCGGTTCATCGAGCTCTCCACCGTCATCCCCGGCCTCAAAAAGATGGACAAGGCGACC ATCCTCGGGGACGCGGTGAAGTATGTGAAGGAGTTGCAGGAGAAGGTGAAGACGCTGGAG GAGGAGGACGGCGGCGGGCGGCCGGCGGCCATGGTGGTGAGGAAGTCGTCGTGCTCCGGC CGGCAGTCCGCCGCCGGCGACGGCGACGGCGAAGGGCGGGTGCCGGAGATCGAGGTGCGG GTGTGGGAGAGGAGCGTGCTGGTGCGGGTGCAGTGCGGGAACTCGCGGGGTTTGCTGGTG AGGTTGCTGTCGGAGGTGGAGGAGCTCCGGCTGGGCATCACCCACACCAGCGTCATGCCA TTCCCGGCCTCCACCGTCATCATCACCATCACCGCTAAGGTGGAAGAGGGATTCAATTCC ACAGTGGATGAGATCATGAGGAGGCTTAACTCAGCACTACTGGACCAATACAATAATGGT AGTGTTGAAGAAACAGATCAAGAAATAAGAAGAGAGTAG

Peptide Sequence

PEP ID	Os12t0632600-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:27088697:27091800:1 gene:Os12g0632600 transcript:Os12t0632600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 021 description:Similar to Helix-loop-helix DNA-binding domain containing protein. (Os12t0632600-00)
Sequence	MDDSSFFMQWAMDTLHQLPSDSTAAAAYATDVAGDSGAFPSLQALRNASAAGGGGGFRDL TVQVDQVHRANSWSSSDSPGGGAATAAAGWSPHVTGGGGRGHRPMSWNFSAASAQPTTED SGGGGGGGVVPAPLQAMETTATARAAVKKGGGGGSSSSAAAPGYVQDHIIAERRRREKIN QRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEEDGGGRPAAMVVRKSSCSG RQSAAGDGDGEGRVPEIEVRVWERSVLVRVQCGNSRGLLVRLLSEVEELRLGITHTSVMP FPASTVIITITAKVEEGFNSTVDEIMRRLNSALLDQYNNGSVEETDQEIRRE

Transcript Sequence

Transcript ID	Os12t0632600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:27088697:27091800:1 gene:Os12g0632600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 021 description:Similar to Helix-loop-helix DNA-binding domain containing protein. (Os12t0632600-00)
Sequence	ATGGATGACTCGAGCTTCTTCATGCAGTGGGCGATGGACACGCTGCACCAGCTCCCCTCC GACTCCACCGCCGCCGCAGCCTACGCCACTGACGTCGCCGGCGACAGCGGCGCCTTCCCG TCGCTGCAAGCTCTCCGCAACGCCTCGGCGGCCGGCGGCGGCGGCGGATTCCGGGACCTG ACAGTGCAGGTGGACCAGGTCCACCGCGCCAACAGCTGGAGCTCCAGCGACAGCCCAGGC GGCGGCGCTGCCACGGCCGCCGCCGGGTGGTCCCCGCATGTCACCGGCGGCGGCGGCAGG GGGCACAGGCCGATGAGCTGGAACTTCAGCGCGGCGTCGGCGCAGCCGACCACCGAGGAT AGCGGCGGTGGAGGCGGCGGCGGAGTAGTTCCGGCGCCGCTGCAGGCGATGGAGACTACC GCGACAGCGAGAGCGGCGGTGAAGAAAGGAGGAGGCGGCGGGTCGTCGTCGTCGGCGGCG GCGCCGGGATACGTGCAGGACCACATAATCGCGGAGCGGCGGCGGCGGGAGAAGATCAAC CAGCGGTTCATCGAGCTCTCCACCGTCATCCCCGGCCTCAAAAAGATGGACAAGGCGACC ATCCTCGGGGACGCGGTGAAGTATGTGAAGGAGTTGCAGGAGAAGGTGAAGACGCTGGAG GAGGAGGACGGCGGCGGGCGGCCGGCGGCCATGGTGGTGAGGAAGTCGTCGTGCTCCGGC CGGCAGTCCGCCGCCGGCGACGGCGACGGCGAAGGGCGGGTGCCGGAGATCGAGGTGCGG GTGTGGGAGAGGAGCGTGCTGGTGCGGGTGCAGTGCGGGAACTCGCGGGGTTTGCTGGTG AGGTTGCTGTCGGAGGTGGAGGAGCTCCGGCTGGGCATCACCCACACCAGCGTCATGCCA TTCCCGGCCTCCACCGTCATCATCACCATCACCGCTAAGGTGGAAGAGGGATTCAATTCC ACAGTGGATGAGATCATGAGGAGGCTTAACTCAGCACTACTGGACCAATACAATAATGGT AGTGTTGAAGAAACAGATCAAGAAATAAGAAGAGAGTAG