Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0631200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:27025315:27029985:-1 gene:Os12g0631200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C6HC-type domain containing protein. (Os12t0631200-01);Similar to ubiquitin-protein ligase/ zinc ion binding protein. (Os12t0631200-02)
Sequence	ATGGAGGAGAGGTTAGCCGACGTGGAGGGCAGTTTCGCCTGCAATTCGAGAGGGGAGGAT GACTTCAGGAGCTGCTGTGGGGATGAGGATGAGTGGGAGGACACCGAGGAGTCATTCACG GCCGGCGTCGCCAAGGGAGAGCTTGATGAGAGCTCGGTGAGGCTGTTCTTCAAGGGCGTG TCGAGCCCCGAGGCGGAGGGGAAGAAGCTGTCCGGGATTGGGGTGGTGATGGAGAGGTCA CCTGGGGTGCCTATGCTTCAGGTGCAGAAGAAACTGGACTTCTATGTGGATGAGCTAGTG GCCGATCACTTGGCGCTGATGGATGGCCTGTTGGTGGCGTTGCAGAATGGGATACGGAAG ATCTTTGCTTTCACCAATTCGGAGAAGCTGTACTTTCAGATCGCAGAAGCTGAAATTCTA GAAGACCAGCTCTTGGTAGCTTTAGGACACAGAATTCTTGAACTGGTGGAAAAGCTGGAA GACTTTGATATAATATTGCTTCCTAGCTTTGAGCTTGAGAGGCCACTGCAGTTGGCCAAA GAAGCCATAGGCATCATGTATCTATCTCCATACGAGGTTGGCACCTGTTCAATTTGCTGT GAGGAAAAACGAGGCGCTCAGATGATCAAAGTGGGTTGTGCTCATACATTTTGCTATAGC TGCTTGACTTCATATACTCAAGAGAAGCTGCAAACCAACAAGGTTCCTATAAGATGCCCA CAGTTAAGGTGTAAATATCATATTTCTGCTAGTGAGTGTAAGTCATTCCTTCCAGTTAGC TGCTACGATTCTCTGGAGAGAGCTTTTGCAGAAGCTGGCACCTCAGACATGGAAAGATTT TATTGTCCCTTTCCAAACTGTTCAGTTCTACTAGATCTTAGTCAGCACTTCTCTAGAGCA AGTACATCAAGTCAGTCAGATCTCAATTGTGTTGAGTGCCCAGAATGCCATAGAGATATC TGTATCAACTGTGGAGTGCCATGGCATGTCATGATGGGCTGTGATGAGTACCAGAGCTTG CCTGTTGATGAAAGAGATGCAGGAGACCTGTCTTTGCATCGGCTAGCACAAAACAATAGG TGGAGGCGTTGTCAGAGATGCCGACGAATGATTGAACTCACACAAGGCTGCTTCCATATG AATTGCTGGTGCGGGCACGAGTTCTGCTACTCCTGTGGCGCCGAGTACACCAATGGTATA CAGACATGCCAATGTGTTTTCTGGGACGAAGAGAGCATCGAGGCTGCCTCGGCAGCGCAT TCCACCCAAGCATCCGAGATATGGGCATGGGACACGTTCGACTGCATGCCAACCGCCATC GAAGGGTACTCGGAGCAGGAGAGAGCTCAGCTGGCTCTCATTCAGAGGTTCCTCTCAGGG GGTTTCAACCTGGGTGAGCCTCCAAGCCAGTCGCCGCCCCGCTGCGCCGATTCATATATC ATTGACACCATGAAGGACCTTCACCAGCTGCCATGGCTCGAGCGGTTCGTTTCGGTGATC AGTGACAGCTACAATGAAGATTACATCCAGTGA

Peptide Sequence

PEP ID	Os12t0631200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:27025315:27029985:-1 gene:Os12g0631200 transcript:Os12t0631200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C6HC-type domain containing protein. (Os12t0631200-01);Similar to ubiquitin-protein ligase/ zinc ion binding protein. (Os12t0631200-02)
Sequence	MEERLADVEGSFACNSRGEDDFRSCCGDEDEWEDTEESFTAGVAKGELDESSVRLFFKGV SSPEAEGKKLSGIGVVMERSPGVPMLQVQKKLDFYVDELVADHLALMDGLLVALQNGIRK IFAFTNSEKLYFQIAEAEILEDQLLVALGHRILELVEKLEDFDIILLPSFELERPLQLAK EAIGIMYLSPYEVGTCSICCEEKRGAQMIKVGCAHTFCYSCLTSYTQEKLQTNKVPIRCP QLRCKYHISASECKSFLPVSCYDSLERAFAEAGTSDMERFYCPFPNCSVLLDLSQHFSRA STSSQSDLNCVECPECHRDICINCGVPWHVMMGCDEYQSLPVDERDAGDLSLHRLAQNNR WRRCQRCRRMIELTQGCFHMNCWCGHEFCYSCGAEYTNGIQTCQCVFWDEESIEAASAAH STQASEIWAWDTFDCMPTAIEGYSEQERAQLALIQRFLSGGFNLGEPPSQSPPRCADSYI IDTMKDLHQLPWLERFVSVISDSYNEDYIQ

Transcript Sequence

Transcript ID	Os12t0631200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:27025315:27029985:-1 gene:Os12g0631200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C6HC-type domain containing protein. (Os12t0631200-01);Similar to ubiquitin-protein ligase/ zinc ion binding protein. (Os12t0631200-02)
Sequence	AGTGCTGCTCCTGCTCCTCGTGGTCGAGAAGGAATAATTAGGGCTCCTCTGTCTTTGCTT TAACGCCACTCCTCTCTCTTTTTCTTCTTCTTCTTCCTCAGAATAAATTCTCTCTCCACT GCCGCAAGGAAAGGCGCCTCACCGTCACCGGGGTGTGCCGGAAAGCTCCCATCTTTGTCT CCATTTGTTGCTTGCCCTCAATTCCTTCCTTCTTTCCTCCCTCTGGGTTCTTGTCCCCGG AGGCCCGGTTTCATCTCTCCTCGATGTGATGCGTGTGACTCCCAGGCAGGTGATTGGAGC TCACGTCGCGGCGGTGATTTGCACTGTCCTCGGGGTCTGAATTGCTAATTACTACTGAGC GTCTCTCTCGCATGAGGAATAATTCGAGAATCGACGAAAGCTCCAACATTTGGGTGAATT TGGTCGCTGCCCCGTTCAATTTCGCCCTCGCGGCCCTGGAATTCGCGATGTGGAGCTCCT TCTGGTGCTTCATGGCCATCCTCTCCGCCAATTTCTGAGCCAAATCTCGTGCGATTCCGA GGCCCCCCCACGAATCTGTGGGGTCGTCGGAGCGATAGGTCACTGGCACCATCACCACCA CCACCATAGTGGTTGTGGCAAAAAGGAACAAGGCACCTTCTTGGAGTTGGGATTAGGTGC AGTCTCGAGCTCAAAAGGGCTCGTTTGGTGGAAACCTTTTTGGTTTTGGTTGCCTGTCAG TGTGCTCAGCTTCTTGCTGACCCATCTAGCTGAATGGAGATTGCTCAAATTGGGGATTGC TCAGCTTTCTAACTGAGTCAGAGAGTGTCGTCTTGATTTGATTTGATTTGATTGGATTTC ACCAATTGGATTGGGATTTCAGCAATGGAGGAGAGGTTAGCCGACGTGGAGGGCAGTTTC GCCTGCAATTCGAGAGGGGAGGATGACTTCAGGAGCTGCTGTGGGGATGAGGATGAGTGG GAGGACACCGAGGAGTCATTCACGGCCGGCGTCGCCAAGGGAGAGCTTGATGAGAGCTCG GTGAGGCTGTTCTTCAAGGGCGTGTCGAGCCCCGAGGCGGAGGGGAAGAAGCTGTCCGGG ATTGGGGTGGTGATGGAGAGGTCACCTGGGGTGCCTATGCTTCAGGTGCAGAAGAAACTG GACTTCTATGTGGATGAGCTAGTGGCCGATCACTTGGCGCTGATGGATGGCCTGTTGGTG GCGTTGCAGAATGGGATACGGAAGATCTTTGCTTTCACCAATTCGGAGAAGCTGTACTTT CAGATCGCAGAAGCTGAAATTCTAGAAGACCAGCTCTTGGTAGCTTTAGGACACAGAATT CTTGAACTGGTGGAAAAGCTGGAAGACTTTGATATAATATTGCTTCCTAGCTTTGAGCTT GAGAGGCCACTGCAGTTGGCCAAAGAAGCCATAGGCATCATGTATCTATCTCCATACGAG GTTGGCACCTGTTCAATTTGCTGTGAGGAAAAACGAGGCGCTCAGATGATCAAAGTGGGT TGTGCTCATACATTTTGCTATAGCTGCTTGACTTCATATACTCAAGAGAAGCTGCAAACC AACAAGGTTCCTATAAGATGCCCACAGTTAAGGTGTAAATATCATATTTCTGCTAGTGAG TGTAAGTCATTCCTTCCAGTTAGCTGCTACGATTCTCTGGAGAGAGCTTTTGCAGAAGCT GGCACCTCAGACATGGAAAGATTTTATTGTCCCTTTCCAAACTGTTCAGTTCTACTAGAT CTTAGTCAGCACTTCTCTAGAGCAAGTACATCAAGTCAGTCAGATCTCAATTGTGTTGAG TGCCCAGAATGCCATAGAGATATCTGTATCAACTGTGGAGTGCCATGGCATGTCATGATG GGCTGTGATGAGTACCAGAGCTTGCCTGTTGATGAAAGAGATGCAGGAGACCTGTCTTTG CATCGGCTAGCACAAAACAATAGGTGGAGGCGTTGTCAGAGATGCCGACGAATGATTGAA CTCACACAAGGCTGCTTCCATATGAATTGCTGGTGCGGGCACGAGTTCTGCTACTCCTGT GGCGCCGAGTACACCAATGGTATACAGACATGCCAATGTGTTTTCTGGGACGAAGAGAGC ATCGAGGCTGCCTCGGCAGCGCATTCCACCCAAGCATCCGAGATATGGGCATGGGACACG TTCGACTGCATGCCAACCGCCATCGAAGGGTACTCGGAGCAGGAGAGAGCTCAGCTGGCT CTCATTCAGAGGTTCCTCTCAGGGGGTTTCAACCTGGGTGAGCCTCCAAGCCAGTCGCCG CCCCGCTGCGCCGATTCATATATCATTGACACCATGAAGGACCTTCACCAGCTGCCATGG CTCGAGCGGTTCGTTTCGGTGATCAGTGACAGCTACAATGAAGATTACATCCAGTGAAAA CAACATAGATAGCATTAAGAAAAAAAAGAATGGCACATACTGATGAATTTCATTTGGAAT AATATGTTTCCATGCCCCTCTTGAAAATCAATACAGGAAAAGTGAGATGGTTCTATACCT TCATGAGCTTTTCCTCTTGTACTCCCTTTTTTCCTGGTTTGGTGCATAAGCAAAAGGAGT TGCCATCACTGATTTTATTTATTTTTTGTTAATTCCCTAAGCGTGTATATGCTTGTTTTT CTTGTGAGCCACACATGCTTGGGATGGTTTCAGAACTTCTTGATGTTGAATTGGATAAGC TACATCAGCAATTGTTCAGTTGATGCGTGTATCTTTACC