Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0630700-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:26997525:27001728:-1 gene:Os12g0630700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NONA protein. (Os12t0630700-01)
Sequence

ATGGCCGCCGCTCGCTGCCTCCCGCTCCGGGCCTCGCCGCCGGAGGTCGCCAAGGCCTTC
TCCTCCTCCATCCCTGCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCACCACCACCGCG
GCCGCCTCTCTCCCTCTCCGCGCCGCCGTTCCCCCGAGCTCCGGCCGCCGTATCCCGCCG
CTCCGGTGCGCCTCCTCCTCCTCGTCGTCGCAGGGCTCCGCGTCGCCGGATATCGCCGTG
CTCCTCGAAGTGGAAGGAGTTCTTGCAGATGTGTATCGCTTCGGCAATCGCCAAGCTTTC
AATGTAGCATTTCAAAATCTTGGGCTGGATTGTGCAAATTGGACAGAGCCAATATATGCT
GATTTAGTGAGGAAAGCTAGTGGCGACGAGGAAAGGATGTTGTTATTATTCTTCAACAGA
ATTGGGTGGCCTACTTCTTTGCCAACTAACGAGAAAGAATCATTTATGAAAAGTGTTCTT
CGTGAAAAGCTGAAAGCTTTGGAAGTGTTCTCAGCTTCTGATAGCTTACCACTGCGGCCT
GGAGTTGAACAGTTCATTGATGATGCGCTTAATGAGGGTGTGCCTGTCGCCATATTGACA
ACATACGGGAGAAATGGAGAGAAAACTTCAAGATATATCATTGAAAAATTAGGCCAAGAG
AGAACATCAAAAATACATATTGTTGGGAAAGAAGAGGTTGAAAGAAGCTTATATGGACAA
CTTGTTCTTGGTGAAGGAGTAGCCTCCAGTTTGGATGAACAGCTAGTTAAGGAAGCACAA
AAGGCTGCTTCTGCAGAAAAGCAGAGGATAGCAGAAGAAGTTGCGTCCATTCTGAAACTT
AGTGTTGATATCAATGCAGCGTCTAAAAGCTCCGAGAAGATTATTGTCACTCTACGCGCT
GGATCCGAGTATGTTGGACGGGACGTGCAAAACTGTGTTCTTGTCGCAGGTAGCCAATCT
GGCGTTCTTGCAGCTGAGCGCATTGGTATGCCATGCATAGTTGTTAGAAGCAGCCTAACC
GCCAGAGCTGAGTTTCACTCTGCGAAGGCCGTCATGGATGGATTTGGTGGTACTGACTTG
ACCATATCGAAACTATTGAGCAAGAAGTGGTCTTGA

Peptide Sequence

PEP ID

Os12t0630700-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:26997525:27001728:-1 gene:Os12g0630700 transcript:Os12t0630700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NONA protein. (Os12t0630700-01)
Sequence

MAAARCLPLRASPPEVAKAFSSSIPASSSSSSSSSSTTTAAASLPLRAAVPPSSGRRIPP
LRCASSSSSSQGSASPDIAVLLEVEGVLADVYRFGNRQAFNVAFQNLGLDCANWTEPIYA
DLVRKASGDEERMLLLFFNRIGWPTSLPTNEKESFMKSVLREKLKALEVFSASDSLPLRP
GVEQFIDDALNEGVPVAILTTYGRNGEKTSRYIIEKLGQERTSKIHIVGKEEVERSLYGQ
LVLGEGVASSLDEQLVKEAQKAASAEKQRIAEEVASILKLSVDINAASKSSEKIIVTLRA
GSEYVGRDVQNCVLVAGSQSGVLAAERIGMPCIVVRSSLTARAEFHSAKAVMDGFGGTDL
TISKLLSKKWS

Transcript Sequence

Transcript ID

Os12t0630700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:26997525:27001728:-1 gene:Os12g0630700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NONA protein. (Os12t0630700-01)
Sequence

AATCTGAGCTATTATTCGTGAAGCTCACGCGCACCTTCTCCTCTCCGCCATGGCCGCCGC
TCGCTGCCTCCCGCTCCGGGCCTCGCCGCCGGAGGTCGCCAAGGCCTTCTCCTCCTCCAT
CCCTGCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCACCACCACCGCGGCCGCCTCTCT
CCCTCTCCGCGCCGCCGTTCCCCCGAGCTCCGGCCGCCGTATCCCGCCGCTCCGGTGCGC
CTCCTCCTCCTCGTCGTCGCAGGGCTCCGCGTCGCCGGATATCGCCGTGCTCCTCGAAGT
GGAAGGAGTTCTTGCAGATGTGTATCGCTTCGGCAATCGCCAAGCTTTCAATGTAGCATT
TCAAAATCTTGGGCTGGATTGTGCAAATTGGACAGAGCCAATATATGCTGATTTAGTGAG
GAAAGCTAGTGGCGACGAGGAAAGGATGTTGTTATTATTCTTCAACAGAATTGGGTGGCC
TACTTCTTTGCCAACTAACGAGAAAGAATCATTTATGAAAAGTGTTCTTCGTGAAAAGCT
GAAAGCTTTGGAAGTGTTCTCAGCTTCTGATAGCTTACCACTGCGGCCTGGAGTTGAACA
GTTCATTGATGATGCGCTTAATGAGGGTGTGCCTGTCGCCATATTGACAACATACGGGAG
AAATGGAGAGAAAACTTCAAGATATATCATTGAAAAATTAGGCCAAGAGAGAACATCAAA
AATACATATTGTTGGGAAAGAAGAGGTTGAAAGAAGCTTATATGGACAACTTGTTCTTGG
TGAAGGAGTAGCCTCCAGTTTGGATGAACAGCTAGTTAAGGAAGCACAAAAGGCTGCTTC
TGCAGAAAAGCAGAGGATAGCAGAAGAAGTTGCGTCCATTCTGAAACTTAGTGTTGATAT
CAATGCAGCGTCTAAAAGCTCCGAGAAGATTATTGTCACTCTACGCGCTGGATCCGAGTA
TGTTGGACGGGACGTGCAAAACTGTGTTCTTGTCGCAGGTAGCCAATCTGGCGTTCTTGC
AGCTGAGCGCATTGGTATGCCATGCATAGTTGTTAGAAGCAGCCTAACCGCCAGAGCTGA
GTTTCACTCTGCGAAGGCCGTCATGGATGGATTTGGTGGTACTGACTTGACCATATCGAA
ACTATTGAGCAAGAAGTGGTCTTGACAACTCGGCACTACATTGGAGTTGCCTGCTACTAG
TTTGAATTTGTATGTAACCCATGGATTGGGTATATGTTACAACCAAAATGAGGCCTCTAT
GTAGTACATTGCAGAAAGAAAACTATGAGAAGCACAAGCTACTTCAGGCATCATTTTTTT
TTTGGGAACAGAAAATGTACTGAACTCGCTGTACTTGGACGAGGCAATTGAACTCATTGT
CTGGTTTGGTCTTTGCATAAAAGTGAGTAATAAGATGGTGATTTTTCATC