Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0630200-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:26960487:26961383:1 gene:Os12g0630200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thaumatin, pathogenesis-related family protein. (Os12t0630200-01)
Sequence

ATGGCCAATACTCGCGTCTTCGTCCTCCTCCTCCTCGCCGTCGCCGTCGCCGTCGTCTAC
AGCGCCGACGCGGCGACCATCACGGTGGTGAACCGCTGCCGCTACACGGTGTGGCCGGGC
GCGCTGCCCGGCGGCGGCGTGCGGCTCGACCCAGGCAAGTCGTGGACGCTCAACGTCGCC
GCCGGCACCAAGGCCGCCAGGATCTGGCCCCGCACCGGCTGCGACTTCGACGGCGCCGGC
CGCGGCCGCTGCCTCACCGGCGACTGCCGCAACGCGCTCTCCTGCGCCGTCTCCGGCGCG
CCGCCGACCACGCTGGCCGAGTACACGCTCGGCACCCCGGGCGCCGCCGGCGGCGACGCC
ACCGACTACTTCGACCTGTCACTGATCGACGGGTTCAACGTGCCGATGAGCTTCCAGCCG
ACGAGCAACGCGGCGCGGTGCGGCGCCCGGCGGCGCGGGCCGAGCTGCGGCGTGGACATC
ACGGCGCAGTGCCTCCCCGAGCTGAAGGTGGCCGGAGGCTGCGACAGCGCGTGCGGCAAG
TTCGGCGGCGACGCCTACTGCTGCCGGGGGAAGTACGAGCACGAGTGCCCGCCGACGAAA
TACTCCAAGTTCTTCAAGGACAAGTGCCCCGACGCGTACAGCTACGCCAAGGATGATCGG
AGCAGCACTTTCACCTGCCCTGCCGGAACAAATTACCAGATCGTCATGTGCCCTTAA

Peptide Sequence

PEP ID

Os12t0630200-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:26960487:26961383:1 gene:Os12g0630200 transcript:Os12t0630200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thaumatin, pathogenesis-related family protein. (Os12t0630200-01)
Sequence

MANTRVFVLLLLAVAVAVVYSADAATITVVNRCRYTVWPGALPGGGVRLDPGKSWTLNVA
AGTKAARIWPRTGCDFDGAGRGRCLTGDCRNALSCAVSGAPPTTLAEYTLGTPGAAGGDA
TDYFDLSLIDGFNVPMSFQPTSNAARCGARRRGPSCGVDITAQCLPELKVAGGCDSACGK
FGGDAYCCRGKYEHECPPTKYSKFFKDKCPDAYSYAKDDRSSTFTCPAGTNYQIVMCP

Transcript Sequence

Transcript ID

Os12t0630200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:26960487:26961383:1 gene:Os12g0630200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thaumatin, pathogenesis-related family protein. (Os12t0630200-01)
Sequence

ATTGCAAGCAGCAGCTAGCTAGCAGAAGAAGCAACCATGGCCAATACTCGCGTCTTCGTC
CTCCTCCTCCTCGCCGTCGCCGTCGCCGTCGTCTACAGCGCCGACGCGGCGACCATCACG
GTGGTGAACCGCTGCCGCTACACGGTGTGGCCGGGCGCGCTGCCCGGCGGCGGCGTGCGG
CTCGACCCAGGCAAGTCGTGGACGCTCAACGTCGCCGCCGGCACCAAGGCCGCCAGGATC
TGGCCCCGCACCGGCTGCGACTTCGACGGCGCCGGCCGCGGCCGCTGCCTCACCGGCGAC
TGCCGCAACGCGCTCTCCTGCGCCGTCTCCGGCGCGCCGCCGACCACGCTGGCCGAGTAC
ACGCTCGGCACCCCGGGCGCCGCCGGCGGCGACGCCACCGACTACTTCGACCTGTCACTG
ATCGACGGGTTCAACGTGCCGATGAGCTTCCAGCCGACGAGCAACGCGGCGCGGTGCGGC
GCCCGGCGGCGCGGGCCGAGCTGCGGCGTGGACATCACGGCGCAGTGCCTCCCCGAGCTG
AAGGTGGCCGGAGGCTGCGACAGCGCGTGCGGCAAGTTCGGCGGCGACGCCTACTGCTGC
CGGGGGAAGTACGAGCACGAGTGCCCGCCGACGAAATACTCCAAGTTCTTCAAGGACAAG
TGCCCCGACGCGTACAGCTACGCCAAGGATGATCGGAGCAGCACTTTCACCTGCCCTGCC
GGAACAAATTACCAGATCGTCATGTGCCCTTAATTAATAATTAAGCTAATATAAGATGTG
ATAATAAGGGGTAGTGATCTTGTGTGTTGATCACTACCATTACCATGCATGCGTGCATGC
GTACGTGTTGTTCAATATATAATAAATGAATAAAAACTCTTATCTTCAATTCTGATG