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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0629700-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:26946904:26947698:-1 gene:Os12g0629700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Thaumatin-like protein precursor. (Os12t0629700-01)
Sequence

ATGGCGTCAGCTCCGGCCGCCTCTCCCGCAGTGCTCGTCGTCGTGGTCCTGGTGGCGACC
CTCGCCGCCGGCGGCGCCAACGCGGCGACCTTCACCATCACCAACCGGTGCTCGTTCACG
GTGTGGCCGGCGGCGACGCCGGTGGGCGGCGGCACGCAGCTGAGCCCGGGGCAGACGTGG
ACCATCAACGTGCCCGCCGGGACCAGCTCCGGCAGGGTGTGGGGCCGGACAGGCTGCAAC
TTCGACGGCGCCGGCAGGGGCGGCTGCGCCACCGGCGACTGCGGCGGCGCGCTGTCGTGC
AGCCTCTCCGGGCGGCCGCCGATGACGCTGGCGGAGTTCACCCTCGGCGGCAGCCAGGAC
TTCTACGACCTGTCGGTGATCGACGGGTACAACGTCGCCATGAGCTTCTCCTGCAGCTCC
GGCGTGGGGCTGACCTGCAGGGACAGCAGATGCCCCGACGCTTACCTGTTCCCCAGCGAC
AACAGCAAGACGCACGCGTGCAGGGGAAACAGCAACTACCAAGTCGTCTTCTGCCCATAG

Peptide Sequence

PEP ID

Os12t0629700-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:26946904:26947698:-1 gene:Os12g0629700 transcript:Os12t0629700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Thaumatin-like protein precursor. (Os12t0629700-01)
Sequence

MASAPAASPAVLVVVVLVATLAAGGANAATFTITNRCSFTVWPAATPVGGGTQLSPGQTW
TINVPAGTSSGRVWGRTGCNFDGAGRGGCATGDCGGALSCSLSGRPPMTLAEFTLGGSQD
FYDLSVIDGYNVAMSFSCSSGVGLTCRDSRCPDAYLFPSDNSKTHACRGNSNYQVVFCP

Transcript Sequence

Transcript ID

Os12t0629700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:26946904:26947698:-1 gene:Os12g0629700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Thaumatin-like protein precursor. (Os12t0629700-01)
Sequence

ACACATCGATCGATATATCCTAAGAGGCAGTTTAAGCTAGCTAGCTACGACTTCGAGAGA
TCGATATATTCAACAATGGCGTCAGCTCCGGCCGCCTCTCCCGCAGTGCTCGTCGTCGTG
GTCCTGGTGGCGACCCTCGCCGCCGGCGGCGCCAACGCGGCGACCTTCACCATCACCAAC
CGGTGCTCGTTCACGGTGTGGCCGGCGGCGACGCCGGTGGGCGGCGGCACGCAGCTGAGC
CCGGGGCAGACGTGGACCATCAACGTGCCCGCCGGGACCAGCTCCGGCAGGGTGTGGGGC
CGGACAGGCTGCAACTTCGACGGCGCCGGCAGGGGCGGCTGCGCCACCGGCGACTGCGGC
GGCGCGCTGTCGTGCAGCCTCTCCGGGCGGCCGCCGATGACGCTGGCGGAGTTCACCCTC
GGCGGCAGCCAGGACTTCTACGACCTGTCGGTGATCGACGGGTACAACGTCGCCATGAGC
TTCTCCTGCAGCTCCGGCGTGGGGCTGACCTGCAGGGACAGCAGATGCCCCGACGCTTAC
CTGTTCCCCAGCGACAACAGCAAGACGCACGCGTGCAGGGGAAACAGCAACTACCAAGTC
GTCTTCTGCCCATAGATCTTCTCACCTAATTAAATTAACTTGATCATGGTCATGGATGAT
CTATGGCTAATATTGCAGCATGCGTGCACGCATTAGCTGGCTGCTATAGATATTGATATA
TATGTCCGTGACGTATGCATGCATGTGTAATATATACTTGTTACGTGGAAATAATAAGAT
AATAATCGTCCATGG