Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0628600-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:26913087:26913851:-1 gene:Os12g0628600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 5 description:Similar to Thaumatin-like pathogenesis-related protein 3 precursor. (Os12t0628600-01)
Sequence	ATGGCGTCTCCGGCCACCTCTTCCGCTGTCCTCGTCGTCGTCCTGGTGGCGACCCTCGCC GCCGGTGGCGCCAACGCGGCGACCTTCACCATCACCAACCGGTGCTCGTTCACGGTGTGG CCGGCGGCGACGCCGGTGGGCGGCGGCGTGCAGCTGAGCCCGGGGCAGACGTGGACCATC AACGTGCCCGCCGGGACCAGCTCCGGCAGGGTGTGGGGCCGCACGGGCTGCAGCTTCGAC GGCTCCGGCCGCGGCAGCTGCGCCACCGGCGACTGCGCCGGCGCCCTGTCGTGCACCCTC TCCGGCCAGAAGCCGCTGACGCTGGCGGAGTTCACCATCGGCGGCAGCCAGGACTTCTAC GACCTGTCGGTGATCGACGGCTACAACGTCGCCATGAGCTTCTCCTGCAGCTCCGGCGTG ACGGTCACCTGCAGGGACAGCCGCTGCCCCGACGCTTACCTGTTCCCCGAAGACAACACC AAGACACACGCCTGCAGCGGCAACAGCAACTACCAAGTCGTCTTCTGCCCATAA

Peptide Sequence

PEP ID	Os12t0628600-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:26913087:26913851:-1 gene:Os12g0628600 transcript:Os12t0628600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 5 description:Similar to Thaumatin-like pathogenesis-related protein 3 precursor. (Os12t0628600-01)
Sequence	MASPATSSAVLVVVLVATLAAGGANAATFTITNRCSFTVWPAATPVGGGVQLSPGQTWTI NVPAGTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCTLSGQKPLTLAEFTIGGSQDFY DLSVIDGYNVAMSFSCSSGVTVTCRDSRCPDAYLFPEDNTKTHACSGNSNYQVVFCP

Transcript Sequence

Transcript ID	Os12t0628600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:26913087:26913851:-1 gene:Os12g0628600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 5 description:Similar to Thaumatin-like pathogenesis-related protein 3 precursor. (Os12t0628600-01)
Sequence	AAAGCATCTCGATCCTACCACATCGTTAAGAAAGTCGTATAGTAGAGTAAATTGTTAATG GCGTCTCCGGCCACCTCTTCCGCTGTCCTCGTCGTCGTCCTGGTGGCGACCCTCGCCGCC GGTGGCGCCAACGCGGCGACCTTCACCATCACCAACCGGTGCTCGTTCACGGTGTGGCCG GCGGCGACGCCGGTGGGCGGCGGCGTGCAGCTGAGCCCGGGGCAGACGTGGACCATCAAC GTGCCCGCCGGGACCAGCTCCGGCAGGGTGTGGGGCCGCACGGGCTGCAGCTTCGACGGC TCCGGCCGCGGCAGCTGCGCCACCGGCGACTGCGCCGGCGCCCTGTCGTGCACCCTCTCC GGCCAGAAGCCGCTGACGCTGGCGGAGTTCACCATCGGCGGCAGCCAGGACTTCTACGAC CTGTCGGTGATCGACGGCTACAACGTCGCCATGAGCTTCTCCTGCAGCTCCGGCGTGACG GTCACCTGCAGGGACAGCCGCTGCCCCGACGCTTACCTGTTCCCCGAAGACAACACCAAG ACACACGCCTGCAGCGGCAACAGCAACTACCAAGTCGTCTTCTGCCCATAATGCATCATC TCATGCATGTAACTAATGTAGTAGTATATGTATCATGGGACAATAATATAAATAAAAAGT TGATGAATAAAACGACACCTTGATCGATAATCATCCATGGACGATATCGATGCAGGTGGA CATATAATATAATATATATGCACTCGACCACGTGTGCAATTGTTT