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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0628400-02
CDS Infomation

cds chromosome:IRGSP-1.0:12:26902165:26905898:1 gene:Os12g0628400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FATTY ACID 2-HYDROXYLASE 1 description:Fatty acid 2-hydroxylase, Resistance to rice blast fungus infection (Os12t0628400-01);Fatty acid hydroxylase domain containing protein. (Os12t0628400-02)
Sequence

ATGGTTGCAGAGGCCTTTACAGTAGATTTGAATGAACCTCTTGTATTTCAGGTTGGACAT
TTAGGTGAGCAGTATCAGGAATGGGTTCACCAACCAATTGTTAGCAAGGAGGGGCCAAGA
CTTTTTGCCAACGATGTCTTAGAGTTCTTAACACGCACGGAATGGTGGGCAATTCCTCTT
ATCTGGTTGCCTGTTGTATGTTGGTGCCTGACTAAATCAGTCGAAATGGGACACACACTT
TCAGAAGTAGCTCTGATGGTTGTGTTTGGAATATGCCTATGGACATTGATCGAGTATATA
ATGCATCGATTCCTGTTCCACATAAATACTAAAAGTTACTGGACAAACACAGCACATTAC
CTTCTTCATGGAATTCATCACAAGCACCCGACTGACGGCCTTCGACTTGTCTTTCCACCA
GCAGCTGCAGCTATCTTGTGCTTTCCGTTCTGGAATCTAATCAGGCTAATTACTACTCCG
ACTACAACTCACGGCGTGTTTGGAGGCGGCCTGTTGGGTTATGTGATGTATGACTGCACA
CACTACTATCTGCATCATGGGCAGCCGTCATCTGATCCAGGAAAACACCTCAAGAAATAC
CATCTGAACCATCACTTCAGAATCCAAAACAAGGGGTTCGGAATAACATCGACGCTGTGG
GATCATGTGTTTGGTACATTGCCCTCGACGAAAACCATCGACAAGAAGAGCTCTTGA

Peptide Sequence

PEP ID

Os12t0628400-02
PEP Infomation

pep chromosome:IRGSP-1.0:12:26902165:26905898:1 gene:Os12g0628400 transcript:Os12t0628400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FATTY ACID 2-HYDROXYLASE 1 description:Fatty acid 2-hydroxylase, Resistance to rice blast fungus infection (Os12t0628400-01);Fatty acid hydroxylase domain containing protein. (Os12t0628400-02)
Sequence

MVAEAFTVDLNEPLVFQVGHLGEQYQEWVHQPIVSKEGPRLFANDVLEFLTRTEWWAIPL
IWLPVVCWCLTKSVEMGHTLSEVALMVVFGICLWTLIEYIMHRFLFHINTKSYWTNTAHY
LLHGIHHKHPTDGLRLVFPPAAAAILCFPFWNLIRLITTPTTTHGVFGGGLLGYVMYDCT
HYYLHHGQPSSDPGKHLKKYHLNHHFRIQNKGFGITSTLWDHVFGTLPSTKTIDKKSS

Transcript Sequence

Transcript ID

Os12t0628400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:26902165:26905898:1 gene:Os12g0628400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FATTY ACID 2-HYDROXYLASE 1 description:Fatty acid 2-hydroxylase, Resistance to rice blast fungus infection (Os12t0628400-01);Fatty acid hydroxylase domain containing protein. (Os12t0628400-02)
Sequence

GGCGTTGGTGGCCATCACTGAGCTTATCATTGGAGCGGCCTCAGCTGAGCTCCCAACCAG
CTGCAGCAGCAGCAGCAGCAGGGGCAGCCTCAGTTCACCGCCCGGCGCCGCCGCATCCAT
CTGCATTGCTCGCTCGGAGGCCTCAGTAATCATTGTTGGAGAAAATGGTTGCAGAGGCCT
TTACAGTAGATTTGAATGAACCTCTTGTATTTCAGGTTGGACATTTAGGTGAGCAGTATC
AGGAATGGGTTCACCAACCAATTGTTAGCAAGGAGGGGCCAAGACTTTTTGCCAACGATG
TCTTAGAGTTCTTAACACGCACGGAATGGTGGGCAATTCCTCTTATCTGGTTGCCTGTTG
TATGTTGGTGCCTGACTAAATCAGTCGAAATGGGACACACACTTTCAGAAGTAGCTCTGA
TGGTTGTGTTTGGAATATGCCTATGGACATTGATCGAGTATATAATGCATCGATTCCTGT
TCCACATAAATACTAAAAGTTACTGGACAAACACAGCACATTACCTTCTTCATGGAATTC
ATCACAAGCACCCGACTGACGGCCTTCGACTTGTCTTTCCACCAGCAGCTGCAGCTATCT
TGTGCTTTCCGTTCTGGAATCTAATCAGGCTAATTACTACTCCGACTACAACTCACGGCG
TGTTTGGAGGCGGCCTGTTGGGTTATGTGATGTATGACTGCACACACTACTATCTGCATC
ATGGGCAGCCGTCATCTGATCCAGGAAAACACCTCAAGAAATACCATCTGAACCATCACT
TCAGAATCCAAAACAAGGGGTTCGGAATAACATCGACGCTGTGGGATCATGTGTTTGGTA
CATTGCCCTCGACGAAAACCATCGACAAGAAGAGCTCTTGACTTGCGCTGCATTTTGCAA
AAAGCCAGAAATGGAGGCAAAGATAAGCATGTATTATGTTCTCCAATGTCCACCTCCTCA
AGCCAAATCCTGTTCAGGTGTTCTAGATTGATTTGCTCCTGCAGAATCCCCATGATTGCA
TGATTGATGACAGGCCTGATGGATGATGAATCACTGATCGATTTCTAGTTCTTATTCTCT
GAAGATGAACCGAAGATCCAAGATTGGTCCATGAAATTATCCTTTCTTGATTTGGCCCTC
CGAGAATAGATTCCTGTGCAATCTAGTCAGTAGTTGTTCAGGTCATGTAAACGTACGGTA
AGAAATTTATGTGCAGAGGGTTTTCCAGTTTATCCTATGCATTTGACCTCTGGTCATGTA
TTGATTCTGAGACAAAGTGTAGTGATCGCTTGATGATACTAGTACACATTGCTGCCTTCT
TTTTTGTCCTGTAAAAGATTTATTATTGGCAGCAATGGATGGTAGAGAGGGCAATCTGCT
TCTTAGTTTTG