Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0628300-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:26895057:26896260:1 gene:Os12g0628300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0628300-01)
Sequence

ATGCCGAGCCCGCTGAAGCGCCGCATCCCAGGCCGCCTCGGCCGCCTCCTCGCCTCCCTC
CGCCCGCCCTCCCGCGCGGGCCCTCTCCCCGTCCAGACCGGCTTCCCCACCTCCCTCGCC
GACCTCCTCGTCAAGAACCATGACCGCCTCCTCCTCACCAAGCCCAGGCGCCGCCGCCGC
CCGACCCCGCCGACGACGACGACCGCTACGGCCTCCGTTGCCGCCGCCGACGTCGAGACA
CCGCTGCCCAGTGGGCGGGAGGAGCTCGAGGAGGAGAAGGTTGGCGGCGTCGCTGTCAGG
CTCCGCCCGGAGCTCCTCGGCGTCGGCGCGGCGGCGGCGCTCGCGCTGATGGTGATCTGG
AGCAGGTGGTTGGTGGCGGCCGTCACCGTCGCCTCGCTGTCGCTGTTCTGGATCGAGTCC
GTCAGGTCCTCCTCCTCCCGCCTCCGGCCACGGCCACGGTCAACTCCCGCGGCGGAGACC
GCCGCTGAGCTGCCGGATTTGCGCGGCCGCGGCGTCGTCTCACCGATCCGGGAGGCGGCG
GCAGCGACGCCCAGGCCGAGCTCCGCCGATTCCGACGTGGGGAGCGAGGTCTCCGTCTCC
TCCATTTGGACCGACGGCGACGAGATGAGCCAGCTCGTCGTCGGCGATTCGACGACCAAT
CCCACCAAGAGGAAGGAGAAGAGGAGGTGGCTGAGGAAGCTAATCGCCAAGAGGAAGGAG
AAGAAGGATTCCTCGGTGGTCTCCCCCTCCCACGGCGAGGTTGTCGGCAACGCCGCCGCC
GAGCAGCAGCAGCAGCCGTCAACGTCGGCGGAGCCGATCATGGCGGAGGCGTCGCCGGCG
GATGGTCGACGAGGAGGCGCATTGCCCGTCGCGGCGTTCGTCCCGGTCGTCCTCGTAGGC
CTCGTCGGCGGGAAGCTCCCGGCGGTGGCGCTGACCGTGATCTTCGCCGTGTTCTTCAGC
TCAGTGGAGAGGAGATCACCAGCTTAG

Peptide Sequence

PEP ID

Os12t0628300-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:26895057:26896260:1 gene:Os12g0628300 transcript:Os12t0628300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0628300-01)
Sequence

MPSPLKRRIPGRLGRLLASLRPPSRAGPLPVQTGFPTSLADLLVKNHDRLLLTKPRRRRR
PTPPTTTTATASVAAADVETPLPSGREELEEEKVGGVAVRLRPELLGVGAAAALALMVIW
SRWLVAAVTVASLSLFWIESVRSSSSRLRPRPRSTPAAETAAELPDLRGRGVVSPIREAA
AATPRPSSADSDVGSEVSVSSIWTDGDEMSQLVVGDSTTNPTKRKEKRRWLRKLIAKRKE
KKDSSVVSPSHGEVVGNAAAEQQQQPSTSAEPIMAEASPADGRRGGALPVAAFVPVVLVG
LVGGKLPAVALTVIFAVFFSSVERRSPA

Transcript Sequence

Transcript ID

Os12t0628300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:26895057:26896260:1 gene:Os12g0628300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0628300-01)
Sequence

ACTTTAGTTCCTTCTTCCTGCCTCTCTCTCTCAGTCGCCTCCTATGCTCGCCGGCGTCGC
CCGCCGCCGGCGATGCCGAGCCCGCTGAAGCGCCGCATCCCAGGCCGCCTCGGCCGCCTC
CTCGCCTCCCTCCGCCCGCCCTCCCGCGCGGGCCCTCTCCCCGTCCAGACCGGCTTCCCC
ACCTCCCTCGCCGACCTCCTCGTCAAGAACCATGACCGCCTCCTCCTCACCAAGCCCAGG
CGCCGCCGCCGCCCGACCCCGCCGACGACGACGACCGCTACGGCCTCCGTTGCCGCCGCC
GACGTCGAGACACCGCTGCCCAGTGGGCGGGAGGAGCTCGAGGAGGAGAAGGTTGGCGGC
GTCGCTGTCAGGCTCCGCCCGGAGCTCCTCGGCGTCGGCGCGGCGGCGGCGCTCGCGCTG
ATGGTGATCTGGAGCAGGTGGTTGGTGGCGGCCGTCACCGTCGCCTCGCTGTCGCTGTTC
TGGATCGAGTCCGTCAGGTCCTCCTCCTCCCGCCTCCGGCCACGGCCACGGTCAACTCCC
GCGGCGGAGACCGCCGCTGAGCTGCCGGATTTGCGCGGCCGCGGCGTCGTCTCACCGATC
CGGGAGGCGGCGGCAGCGACGCCCAGGCCGAGCTCCGCCGATTCCGACGTGGGGAGCGAG
GTCTCCGTCTCCTCCATTTGGACCGACGGCGACGAGATGAGCCAGCTCGTCGTCGGCGAT
TCGACGACCAATCCCACCAAGAGGAAGGAGAAGAGGAGGTGGCTGAGGAAGCTAATCGCC
AAGAGGAAGGAGAAGAAGGATTCCTCGGTGGTCTCCCCCTCCCACGGCGAGGTTGTCGGC
AACGCCGCCGCCGAGCAGCAGCAGCAGCCGTCAACGTCGGCGGAGCCGATCATGGCGGAG
GCGTCGCCGGCGGATGGTCGACGAGGAGGCGCATTGCCCGTCGCGGCGTTCGTCCCGGTC
GTCCTCGTAGGCCTCGTCGGCGGGAAGCTCCCGGCGGTGGCGCTGACCGTGATCTTCGCC
GTGTTCTTCAGCTCAGTGGAGAGGAGATCACCAGCTTAGCTCTAGTGATGATGAACTCAT
CTCACCATCAGTTCAGGTTTCTGAATTTCTTCAGAAATCAATCCGAAAGCTGCCCCTCGA
AACCGAGGGAAACTTTCAGAAATTCAGATCGAGTTCGTTCGTTTGTTGTAAATTTAGAGA
ACCC