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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0628100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:26888810:26890166:-1 gene:Os12g0628100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 11 description:Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6). (Os12t0628100-01)
Sequence

ATGGCATTCGTCAGATCACGCGCAAATGCTTCCTCTGGAATCGGTGTAGCTGCCGAGTGC
AAGCAGACATTTCTGGAGCTTCAGAGGAAGAAATCACACCGCTATGTCATCTTCAAGATC
GACGACAAGTGCAAGGAGGTCGTCGTCGAAAAGACAGGTTCATCGACCGAGAGCTTCGAC
GATTTCATGGACTCACTCCCTGAATCTGACTGCCGCTACGCCATCTACGACTTCGACTTC
GTCACCGAGGAGAACTGCCAGAAGAGCAAGATCTTCTTCGTCGCATGGTCGCCTTCGGTT
TCTCGCATCCGCGCCAAGATGTTGTATGCTACCTCCAAAGAACGGTTCAGGAGAGAGCTG
GATGGTGTGCACTATGAGATTCAGGCAACTGATCCGTCGGAGCTGGACATTGAGCTTCTT
AGAGAGCGTGCTCATTGA

Peptide Sequence

PEP ID

Os12t0628100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:26888810:26890166:-1 gene:Os12g0628100 transcript:Os12t0628100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 11 description:Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6). (Os12t0628100-01)
Sequence

MAFVRSRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFD
DFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRREL
DGVHYEIQATDPSELDIELLRERAH

Transcript Sequence

Transcript ID

Os12t0628100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:26888810:26890166:-1 gene:Os12g0628100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 11 description:Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6). (Os12t0628100-01)
Sequence

GTGTGTTCTTGTATCTTTCTCTGCTTAATCAGCATCTTTAGAGGAGGAAATTAACCATGG
CATTCGTCAGATCACGCGCAAATGCTTCCTCTGGAATCGGTGTAGCTGCCGAGTGCAAGC
AGACATTTCTGGAGCTTCAGAGGAAGAAATCACACCGCTATGTCATCTTCAAGATCGACG
ACAAGTGCAAGGAGGTCGTCGTCGAAAAGACAGGTTCATCGACCGAGAGCTTCGACGATT
TCATGGACTCACTCCCTGAATCTGACTGCCGCTACGCCATCTACGACTTCGACTTCGTCA
CCGAGGAGAACTGCCAGAAGAGCAAGATCTTCTTCGTCGCATGGTCGCCTTCGGTTTCTC
GCATCCGCGCCAAGATGTTGTATGCTACCTCCAAAGAACGGTTCAGGAGAGAGCTGGATG
GTGTGCACTATGAGATTCAGGCAACTGATCCGTCGGAGCTGGACATTGAGCTTCTTAGAG
AGCGTGCTCATTGAGAAAAATCAATCAATCAATCACTAGGAAATAATCATCATCTTGCAT
TATGAGATATTTGTAATAGCTATTATATATGTTACTATGTACTGAAACTTGCACACTGTT
GAGGTACGGTTGTTCTGCTTCAGCTATACACAATTTCTGTTGAAGTACAACTGTGCAAGT
ATGAAAAACTGTGGGTTGTCTGGTTAAGACTAATTTAT