Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0626100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:26759757:26762339:-1 gene:Os12g0626100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HEAT-like. (Os12t0626100-01)
Sequence

CCACCTCGCTCGCCGGCGGACTCGATTGGCTCACCGGCGGCGACGGAGGAGGAGGAGGCA
TCTGCGGCGTTCGGCGCGACCCCGGAGATGGAGGGGTTCCTCTGCGACCGCCTGCTCGAC
GCGGCGCAGCCCATCGCCGAGCGCTTCCGGGCGCTCTTCTCCCTCCGCAACCTCCGCGGC
GACGCCCCTCGCCGCGCCCTCCTCCAAGCTGCAAGGGACTCTTCAAACTTGCTTGCCCAT
GAGGCTGCATTTGCACTAGGACAAATGCAAGATGCTGAGGCTATCCCTGCATTAGAGGCA
GTTCTCAAAGATCTTTCACTTCATCCAATTGTCCGACACGAGGCTGCGGAAGCGCTTGGA
GCTATTGGCCTGGAAAAGAGCATTTCCCTGCTGGAGGAGAGTTTAGCTGTTGATCCTGCC
GTGGAAGTTCAAGAAACATGTGAGCTGGCTATTAGACGGATAGAAGAGCAAAAGAATACT
AGTGGAGTTGAAAGTGCAACTGTTTCACCTTTTCTCTCAGTTGATCCAGCACTGCCTGCA
AAGCAAGGACTTCCAGTAGAACAACTAAGGCATCTTCTTCTCAACGAGCAAGAAAGCATG
TATGAACGTTATGCAGCTCTCTTTGCACTAAGGAATGACAGTGGAGATGCTGCTGTTTCT
GCTATTGTTGCTGCTCTAGGCGTCAAAAGTGCTCTTCTACGCCACGAGGTTGCTTATGTG
TTAGGCCAGCTACAAAACAAAGCTGCTTCAGATGCACTTTCCACTGTCCTGAAGAATGTT
GATGAGCATCCAATGGTCAGGCATGAAGCTGCTGAGGCCCTTGGTTCAATTGCAGATCAG
GAAAGCATTGCACTTCTGGAGGAGTTTGCAAAGGACCCTGAGCCAATAGTCTCCCAGAGC
TGCGAAGTAGCACTCAGCATGCTTGAATATGAGAGATCAGGGAAGGCCTTTGAGTTTTTG
TTCCCGCAGACTCCTCAGGTGCAGCAGGAGTCCTAA

Peptide Sequence

PEP ID

Os12t0626100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:26759757:26762339:-1 gene:Os12g0626100 transcript:Os12t0626100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HEAT-like. (Os12t0626100-01)
Sequence

PPRSPADSIGSPAATEEEEASAAFGATPEMEGFLCDRLLDAAQPIAERFRALFSLRNLRG
DAPRRALLQAARDSSNLLAHEAAFALGQMQDAEAIPALEAVLKDLSLHPIVRHEAAEALG
AIGLEKSISLLEESLAVDPAVEVQETCELAIRRIEEQKNTSGVESATVSPFLSVDPALPA
KQGLPVEQLRHLLLNEQESMYERYAALFALRNDSGDAAVSAIVAALGVKSALLRHEVAYV
LGQLQNKAASDALSTVLKNVDEHPMVRHEAAEALGSIADQESIALLEEFAKDPEPIVSQS
CEVALSMLEYERSGKAFEFLFPQTPQVQQES

Transcript Sequence

Transcript ID

Os12t0626100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:26759757:26762339:-1 gene:Os12g0626100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HEAT-like. (Os12t0626100-01)
Sequence

TTGGGACGCGGGATTCCCTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCAGTGACCA
CCTCGCTCGCCGGCGGACTCGATTGGCTCACCGGCGGCGACGGAGGAGGAGGAGGCATCT
GCGGCGTTCGGCGCGACCCCGGAGATGGAGGGGTTCCTCTGCGACCGCCTGCTCGACGCG
GCGCAGCCCATCGCCGAGCGCTTCCGGGCGCTCTTCTCCCTCCGCAACCTCCGCGGCGAC
GCCCCTCGCCGCGCCCTCCTCCAAGCTGCAAGGGACTCTTCAAACTTGCTTGCCCATGAG
GCTGCATTTGCACTAGGACAAATGCAAGATGCTGAGGCTATCCCTGCATTAGAGGCAGTT
CTCAAAGATCTTTCACTTCATCCAATTGTCCGACACGAGGCTGCGGAAGCGCTTGGAGCT
ATTGGCCTGGAAAAGAGCATTTCCCTGCTGGAGGAGAGTTTAGCTGTTGATCCTGCCGTG
GAAGTTCAAGAAACATGTGAGCTGGCTATTAGACGGATAGAAGAGCAAAAGAATACTAGT
GGAGTTGAAAGTGCAACTGTTTCACCTTTTCTCTCAGTTGATCCAGCACTGCCTGCAAAG
CAAGGACTTCCAGTAGAACAACTAAGGCATCTTCTTCTCAACGAGCAAGAAAGCATGTAT
GAACGTTATGCAGCTCTCTTTGCACTAAGGAATGACAGTGGAGATGCTGCTGTTTCTGCT
ATTGTTGCTGCTCTAGGCGTCAAAAGTGCTCTTCTACGCCACGAGGTTGCTTATGTGTTA
GGCCAGCTACAAAACAAAGCTGCTTCAGATGCACTTTCCACTGTCCTGAAGAATGTTGAT
GAGCATCCAATGGTCAGGCATGAAGCTGCTGAGGCCCTTGGTTCAATTGCAGATCAGGAA
AGCATTGCACTTCTGGAGGAGTTTGCAAAGGACCCTGAGCCAATAGTCTCCCAGAGCTGC
GAAGTAGCACTCAGCATGCTTGAATATGAGAGATCAGGGAAGGCCTTTGAGTTTTTGTTC
CCGCAGACTCCTCAGGTGCAGCAGGAGTCCTAAGTGAGTTGTGAAAGTGTGAACTGAGAG
CGAGAGGCAGGCTGGAATGTGTCTAATCCTGTAATCCAAACCTTATACCAGTCTACCTTG
AATTGATATGTTCGTCAAAAGGATTTACTGATCAATCTCTGGGCTCTCATTCTAGG