Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0623500-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:26621211:26625850:-1 gene:Os12g0623500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cationic amino acid transporter 11 description:Similar to Cationic amino acid transporter-like protein. (Os12t0623500-01);Similar to Cationic amino acid transporter-like protein. (Os12t0623500-02)
Sequence	ATGGGGCTCGAGGAAGGCGGCGCGATGAGGGCGCTGATGCGGCGGAAGCAGGTGGACTCC GACCGGGTCCGCGCCGCCGGCGGCCACCAGCTCGCCAAGGAGCTCTCCGTTACGCAGCTC GTCGCGATTGGTGTTGGTTCAACAATTGGAGCTGGAGTATATGTTCTTGTGGGAACAGTT GCTCGGGAGCATGCTGGGCCGGCATTGACACTTTCATTTCTGATAGCTGGAGTGGCAGCT GCACTCTCAGCTTTCTGTTATGCAGAGCTTGCTAGTCGCTGCCCTTCTGCAGGAAGTGCC TACCATTATTCGTACATCTGCGTTGGCGAAGGAGTTGCATGGCTGATTGGTTGGGCATTG ATACTGGAATACACCATCGGCGGATCAGCTGTTGCCCGTGGCATTTCTCCCAATCTGGCT TTATTTTTTGGAGGACAGGATAGTCTACCATGGTTTTTAGCACGCCATGAGCTTCCATGG TTTGATGTTGTTGTCGATCCTTGTGCGGCTTTCCTGGTTCTCGTTGTCACCGCCTTGCTA TGCAAGGGGATAAAAGAGAGCTCATTTGTACAAGGAGTTGTGACAGTCCTAAATTGCTTC GTGATGCTATTTGTTATTATAGCCGGCAGTTACATTGGCTTCCAAACAGGATGGGTCGGC TATAAGGTGGCTGGCGGGTTTTTCCCTTATGGGGCGAACGGAATGCTTGCTGGGTCAGCA ACTGTTTTCTTTGCCTACATAGGCTTTGATTCAGTTGCTAGCACTGCCGAGGAGGTGAAA AATCCCCAACGAGATCTGCCACTGGGAATAGGAACAGCATTGTCAGTTTGCTGTTCCTTA TACATGTTGGTTTCAGTTGTTATCGTTGGTCTGGTACCATATTTCGCTATGGACCCAGAT ACCCCTATATCATCAGCCTTTGCAAGACATGGGATGCACTGGGCCATGTACCTTGTTACA ACTGGTGCTGTTCTTGCTCTTTGCTCAACCTTGATGGGATCGATTCTGCCACAGCCAAGA ATATTGATGGCCATGGCACGCGATGGGCTTTTGCCATCCTTCTTCTCTGATGTCAACCAG CGGACACAAGTTCCTGTCAAGAGCACAATTGTTACTGGCATATGTGCAGCTTGTCTGGCC TTCTTCATGGATGTGTCACAACTGGCAGGAATGGTCAGTGTGGGCACACTCCTTGCATTC ACTATAGTTGCTGTGTCCATCTTGATCCTCAGATATGCTCCTCCAGATGAGGTACCCCTG CCATCTTCTCTGGAAGCGTCATTCCGTTTGAGCCAAGAATATGATGAGGAAAAGGTTAGG GGTCCTCCTGTAGATGCGAATCATGAACAGTTGTCATCTGTGGTAGAATCAATAAATGAC ACCCTTATCGAGAAGAAGCAAGACACAAGTGTGGAGGAGTCAAAGCGTCGGAAAGCAGCT GTTTGCAGCATATCATCTGTATGTGTAGGGGTTGTGGTCCTCACAACTTCAGCTTCTTTC ACATTCTTGCCATTCCTTTTGCGATGCTTCTTCTGTGTTTTTGGTGGCCTACTCCTCCTA GCCGGTCTCGGTGTCCTCTGCTATATCGACCAAGATGACGGGAGGCACTCATTTGGTCAC TCTGGAGGATTCATCTGCCCCTTCGTTCCGTTGTTGCCGGTGATGTGCATCCTCGTGAAC ACATACTTGTTAGTAAACTTGGGTGGAGGGACATGGATGAGAGTTGGGGTATGGCTGGTA ATGGGAGTATTCGTGTACATTTTCTATGGCCGGACCCACAGCTCATTGACCGACGTGGTG TATGTTCCGGTGGCGCAAGCGGAAGAGATATACGGTTCATCATCTTCATCAGGATTTGTG GCCTAG

Peptide Sequence

PEP ID	Os12t0623500-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:26621211:26625850:-1 gene:Os12g0623500 transcript:Os12t0623500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cationic amino acid transporter 11 description:Similar to Cationic amino acid transporter-like protein. (Os12t0623500-01);Similar to Cationic amino acid transporter-like protein. (Os12t0623500-02)
Sequence	MGLEEGGAMRALMRRKQVDSDRVRAAGGHQLAKELSVTQLVAIGVGSTIGAGVYVLVGTV AREHAGPALTLSFLIAGVAAALSAFCYAELASRCPSAGSAYHYSYICVGEGVAWLIGWAL ILEYTIGGSAVARGISPNLALFFGGQDSLPWFLARHELPWFDVVVDPCAAFLVLVVTALL CKGIKESSFVQGVVTVLNCFVMLFVIIAGSYIGFQTGWVGYKVAGGFFPYGANGMLAGSA TVFFAYIGFDSVASTAEEVKNPQRDLPLGIGTALSVCCSLYMLVSVVIVGLVPYFAMDPD TPISSAFARHGMHWAMYLVTTGAVLALCSTLMGSILPQPRILMAMARDGLLPSFFSDVNQ RTQVPVKSTIVTGICAACLAFFMDVSQLAGMVSVGTLLAFTIVAVSILILRYAPPDEVPL PSSLEASFRLSQEYDEEKVRGPPVDANHEQLSSVVESINDTLIEKKQDTSVEESKRRKAA VCSISSVCVGVVVLTTSASFTFLPFLLRCFFCVFGGLLLLAGLGVLCYIDQDDGRHSFGH SGGFICPFVPLLPVMCILVNTYLLVNLGGGTWMRVGVWLVMGVFVYIFYGRTHSSLTDVV YVPVAQAEEIYGSSSSSGFVA

Transcript Sequence

Transcript ID	Os12t0623500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:26621211:26625850:-1 gene:Os12g0623500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cationic amino acid transporter 11 description:Similar to Cationic amino acid transporter-like protein. (Os12t0623500-01);Similar to Cationic amino acid transporter-like protein. (Os12t0623500-02)
Sequence	ATGGGGCTCGAGGAAGGCGGCGCGATGAGGGCGCTGATGCGGCGGAAGCAGGTGGACTCC GACCGGGTCCGCGCCGCCGGCGGCCACCAGCTCGCCAAGGAGCTCTCCGTTACGCAGCTC GTCGCGATTGGTGTTGGTTCAACAATTGGAGCTGGAGTATATGTTCTTGTGGGAACAGTT GCTCGGGAGCATGCTGGGCCGGCATTGACACTTTCATTTCTGATAGCTGGAGTGGCAGCT GCACTCTCAGCTTTCTGTTATGCAGAGCTTGCTAGTCGCTGCCCTTCTGCAGGAAGTGCC TACCATTATTCGTACATCTGCGTTGGCGAAGGAGTTGCATGGCTGATTGGTTGGGCATTG ATACTGGAATACACCATCGGCGGATCAGCTGTTGCCCGTGGCATTTCTCCCAATCTGGCT TTATTTTTTGGAGGACAGGATAGTCTACCATGGTTTTTAGCACGCCATGAGCTTCCATGG TTTGATGTTGTTGTCGATCCTTGTGCGGCTTTCCTGGTTCTCGTTGTCACCGCCTTGCTA TGCAAGGGGATAAAAGAGAGCTCATTTGTACAAGGAGTTGTGACAGTCCTAAATTGCTTC GTGATGCTATTTGTTATTATAGCCGGCAGTTACATTGGCTTCCAAACAGGATGGGTCGGC TATAAGGTGGCTGGCGGGTTTTTCCCTTATGGGGCGAACGGAATGCTTGCTGGGTCAGCA ACTGTTTTCTTTGCCTACATAGGCTTTGATTCAGTTGCTAGCACTGCCGAGGAGGTGAAA AATCCCCAACGAGATCTGCCACTGGGAATAGGAACAGCATTGTCAGTTTGCTGTTCCTTA TACATGTTGGTTTCAGTTGTTATCGTTGGTCTGGTACCATATTTCGCTATGGACCCAGAT ACCCCTATATCATCAGCCTTTGCAAGACATGGGATGCACTGGGCCATGTACCTTGTTACA ACTGGTGCTGTTCTTGCTCTTTGCTCAACCTTGATGGGATCGATTCTGCCACAGCCAAGA ATATTGATGGCCATGGCACGCGATGGGCTTTTGCCATCCTTCTTCTCTGATGTCAACCAG CGGACACAAGTTCCTGTCAAGAGCACAATTGTTACTGGCATATGTGCAGCTTGTCTGGCC TTCTTCATGGATGTGTCACAACTGGCAGGAATGGTCAGTGTGGGCACACTCCTTGCATTC ACTATAGTTGCTGTGTCCATCTTGATCCTCAGATATGCTCCTCCAGATGAGGTACCCCTG CCATCTTCTCTGGAAGCGTCATTCCGTTTGAGCCAAGAATATGATGAGGAAAAGGTTAGG GGTCCTCCTGTAGATGCGAATCATGAACAGTTGTCATCTGTGGTAGAATCAATAAATGAC ACCCTTATCGAGAAGAAGCAAGACACAAGTGTGGAGGAGTCAAAGCGTCGGAAAGCAGCT GTTTGCAGCATATCATCTGTATGTGTAGGGGTTGTGGTCCTCACAACTTCAGCTTCTTTC ACATTCTTGCCATTCCTTTTGCGATGCTTCTTCTGTGTTTTTGGTGGCCTACTCCTCCTA GCCGGTCTCGGTGTCCTCTGCTATATCGACCAAGATGACGGGAGGCACTCATTTGGTCAC TCTGGAGGATTCATCTGCCCCTTCGTTCCGTTGTTGCCGGTGATGTGCATCCTCGTGAAC ACATACTTGTTAGTAAACTTGGGTGGAGGGACATGGATGAGAGTTGGGGTATGGCTGGTA ATGGGAGTATTCGTGTACATTTTCTATGGCCGGACCCACAGCTCATTGACCGACGTGGTG TATGTTCCGGTGGCGCAAGCGGAAGAGATATACGGTTCATCATCTTCATCAGGATTTGTG GCCTAGGTAAGGAGCAGAGTACCAAAGCCTTGAGTGATGAAATGCTCCAAAATCAATTTT ACCACACTTTGAACAAACCTGGCTGAAAGGGACTCCTGCTGCTGCGTTCTGTATTGCATG CCAGGCATATGGGTTTGAAGAATTCAATTCATATATTGATTTTTAAATTGTATAAATTAT AGTGTAAGGTCATATTTCGTATAAGCACCTAGTTGAATGAATGTGAATATTAAATAGATA TATAATGAAGATAAGGTCTGTAATATGTGTAAATTCACTAGAGTATATCCCAGCTTCTGC TGGGAAAATTCATATTTCCATGTACCTTTTGCACTCGAGGTCTTCTTGAGTGGGAAATGC TGAAGACCTTGGTCAGATCCTGCAACATGAATAAAGTCAACACATTCCCATT