Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0622900-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:26599762:26604728:1 gene:Os12g0622900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mov34/MPN/PAD-1 family protein. (Os12t0622900-01)
Sequence	ATGCCGCCGCATGAGGACGCCCTCGATGCCGGCGCCGTTGACGTGCTCACCTTCAGGCTC CACCCCCTCGCTGTCTTGAAATTATCCCACCGCATCCGCGAGTTCGTCCATCTCCACGAT GACCAATACCAGCAAGCGAGGATGTCTGGGTGCGTTATTGGGGTTCGGCGTGGTGGGACG GTGGATATCTCCGATACCTTCGACATCTTGCACGACCCCGACCCCGGAACCTTCGACCGC GCCTTACTGGAGAAGGATCAGGAGATCTACAAGAAGGCCTTCCCTGACTTGTCCGTTCTC GGGTGGTACTCCATTGGGACCAATGTGCACGCCACCGACACGGGAATCCACCATGGGGAC TACACCGACATGCAAATCCACCAGACCTTGATGGATGCTAATGGAACAGCCTTTTATCTT CTATTAAATCCTGCAATCAACTTTTCCCATAAGGATATTCCTGTGACTATTTATGAAAGA GTGTTGTGCAATTCCGATGGGAGTCCCCCGGTCAGCTTTGTCCAAGGAAACTATACAGTT GAGATTGTAGGAGCAGAGAGGATATCTTTAGACCATGCTGATTTTCTCTATCCAAGTCCA TGCGTAGTCTTCGATGTTCTTGCACCACCTCTTGGAGAAAAAAAAAATGCATTTAGGACG ATGTTGTTTGAAACCCCTTCGGGATTTGCAATGTTCCGTGTTTCGGATGTTTTATTTAGA TATCCGGAGGACATATGGTCGAGTTTTACTGATCCACATACTGCACACCAGGTCGTTCGT ACCATTGGTTTTATTGAGGTTGGTGACAAATCTGTTGTATGGGATAATGATATTGGTCCT GGCGAGGATATAGAGCACTTTATCCTAAAATTTCCAATTAAATCATTGGTTGTTCCAGAT GCACAGCTTAAATTTATTATTGAGAAAAACCTTAACATTAGCTGTTGGTTTAATGGGCGT ATTGTTCCTGAGTTGATTTGGGGACTAAATTATGCCCTGGATGAATTTGTGCCTCGAGAG AAGGGCAACCTATCAAATGAACGCCATTTTCCACTGAGCAAGCAACTGCATGAGCAGTTA AAAGCATATGGATTTAGTATCTCACCACAATTGATTAACAGAGAGTTTATAACCAGTTTT GGTTACTTAAATTATCTGGAACGTACTTCAAATTGCATTTCCGGAGATTTACACCAGAAA TTTGATCGTTTCTTTTGTGGACTTGAGATGTCTGAGGGAGAGTTTGTAAGAGGAGTTGCA CACCGTCTCCATTCCATGGAGGAAGTGGCATCTACACCAGGCAGACGAGAGGCATTGAGC AATGCTGAATTTCTTTTGGCGGTTCCTAAGAAGAAGTGTAACACGATATCTCGTCTTAAG CGTATGGAGGCAGAGGATAGGGGTACAGGGCTTGGGCATCCTTGGGTTTGCGCTGCTGCT GTTGCGGTGGGCTTCGGGGTTATGGCAGGATTGTGCATTGCGATGAAGCGAGCAAATTAG

Peptide Sequence

PEP ID	Os12t0622900-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:26599762:26604728:1 gene:Os12g0622900 transcript:Os12t0622900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mov34/MPN/PAD-1 family protein. (Os12t0622900-01)
Sequence	MPPHEDALDAGAVDVLTFRLHPLAVLKLSHRIREFVHLHDDQYQQARMSGCVIGVRRGGT VDISDTFDILHDPDPGTFDRALLEKDQEIYKKAFPDLSVLGWYSIGTNVHATDTGIHHGD YTDMQIHQTLMDANGTAFYLLLNPAINFSHKDIPVTIYERVLCNSDGSPPVSFVQGNYTV EIVGAERISLDHADFLYPSPCVVFDVLAPPLGEKKNAFRTMLFETPSGFAMFRVSDVLFR YPEDIWSSFTDPHTAHQVVRTIGFIEVGDKSVVWDNDIGPGEDIEHFILKFPIKSLVVPD AQLKFIIEKNLNISCWFNGRIVPELIWGLNYALDEFVPREKGNLSNERHFPLSKQLHEQL KAYGFSISPQLINREFITSFGYLNYLERTSNCISGDLHQKFDRFFCGLEMSEGEFVRGVA HRLHSMEEVASTPGRREALSNAEFLLAVPKKKCNTISRLKRMEAEDRGTGLGHPWVCAAA VAVGFGVMAGLCIAMKRAN

Transcript Sequence

Transcript ID	Os12t0622900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:26599762:26604728:1 gene:Os12g0622900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mov34/MPN/PAD-1 family protein. (Os12t0622900-01)
Sequence	CCATCCGCTCCGCCGCCATTTTAGGGATCCCTCGGCGCGTGGCCTCCGGTGCGGTGATGC CGCCGCATGAGGACGCCCTCGATGCCGGCGCCGTTGACGTGCTCACCTTCAGGCTCCACC CCCTCGCTGTCTTGAAATTATCCCACCGCATCCGCGAGTTCGTCCATCTCCACGATGACC AATACCAGCAAGCGAGGATGTCTGGGTGCGTTATTGGGGTTCGGCGTGGTGGGACGGTGG ATATCTCCGATACCTTCGACATCTTGCACGACCCCGACCCCGGAACCTTCGACCGCGCCT TACTGGAGAAGGATCAGGAGATCTACAAGAAGGCCTTCCCTGACTTGTCCGTTCTCGGGT GGTACTCCATTGGGACCAATGTGCACGCCACCGACACGGGAATCCACCATGGGGACTACA CCGACATGCAAATCCACCAGACCTTGATGGATGCTAATGGAACAGCCTTTTATCTTCTAT TAAATCCTGCAATCAACTTTTCCCATAAGGATATTCCTGTGACTATTTATGAAAGAGTGT TGTGCAATTCCGATGGGAGTCCCCCGGTCAGCTTTGTCCAAGGAAACTATACAGTTGAGA TTGTAGGAGCAGAGAGGATATCTTTAGACCATGCTGATTTTCTCTATCCAAGTCCATGCG TAGTCTTCGATGTTCTTGCACCACCTCTTGGAGAAAAAAAAAATGCATTTAGGACGATGT TGTTTGAAACCCCTTCGGGATTTGCAATGTTCCGTGTTTCGGATGTTTTATTTAGATATC CGGAGGACATATGGTCGAGTTTTACTGATCCACATACTGCACACCAGGTCGTTCGTACCA TTGGTTTTATTGAGGTTGGTGACAAATCTGTTGTATGGGATAATGATATTGGTCCTGGCG AGGATATAGAGCACTTTATCCTAAAATTTCCAATTAAATCATTGGTTGTTCCAGATGCAC AGCTTAAATTTATTATTGAGAAAAACCTTAACATTAGCTGTTGGTTTAATGGGCGTATTG TTCCTGAGTTGATTTGGGGACTAAATTATGCCCTGGATGAATTTGTGCCTCGAGAGAAGG GCAACCTATCAAATGAACGCCATTTTCCACTGAGCAAGCAACTGCATGAGCAGTTAAAAG CATATGGATTTAGTATCTCACCACAATTGATTAACAGAGAGTTTATAACCAGTTTTGGTT ACTTAAATTATCTGGAACGTACTTCAAATTGCATTTCCGGAGATTTACACCAGAAATTTG ATCGTTTCTTTTGTGGACTTGAGATGTCTGAGGGAGAGTTTGTAAGAGGAGTTGCACACC GTCTCCATTCCATGGAGGAAGTGGCATCTACACCAGGCAGACGAGAGGCATTGAGCAATG CTGAATTTCTTTTGGCGGTTCCTAAGAAGAAGTGTAACACGATATCTCGTCTTAAGCGTA TGGAGGCAGAGGATAGGGGTACAGGGCTTGGGCATCCTTGGGTTTGCGCTGCTGCTGTTG CGGTGGGCTTCGGGGTTATGGCAGGATTGTGCATTGCGATGAAGCGAGCAAATTAGAACT GGGTAATAGGACCAATGAGACTAAATTAGGATCCGTATGTACGGTGACAAACAACTTTTG TGATCTAAAGTGACCAGTAAAC