Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0622500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:26578011:26580981:1 gene:Os12g0622500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOPOISOMERASE 6 SUBUNIT A description:Spo11/DNA topoisomerase VI, subunit A family protein. (Os12t0622500-01)
Sequence	ATGGATGATTCAACGGATGACGATTCGTATCATCCAAGAAAACACTATGCTTATGATCGT CAGGTTTCTTCAAGCAGATGGCGTACCAGCCGCGAGTATATCAGAGGTCCCGGCCCCGAA ACTCATACTACTGAGAGTGCTCAAGATGGACAGGATCCACCTGCTGGAGTATATTCCTAT GGTTATTTTTCTGGCAGTGGTAATGATCCTCAAGTTCAAGGACACTTTGTTCCGGAGATT CAAAAGTACAACCCTTACGTGATTTTCAAAGGTGAACAACTCCCGGTTCCTATATGGGAA CTGCCAGAGGAGAAGGTCCAAGATTTTCATGATAGGTACTTTATTGCAAAAGACAAGAGT CGAGTTGAAGCCAGGAAGACTCTGAATAGGTTGTTAGAGGGGAACATCAATACAATTGAA AGGGGACATGGATATAAATTCAATATTCCAAAATATACAGATAACATGGAGTTTAATGAG GAAGTCAAGGTTTCTCTAGCAAAAGCAGGCAAGACCATAAGCCGTTCCTTTTGCAATGCG AATCAGCGGGAAGTTGCATCTAGGACTGGCTATACCATTGATCTAATAGAACGGACACTT GGGGCTGGATTGAACATCTCGAAGAGAACTGTCTTATACACAAACAAGGATCTGTTTGGG GATCAAAGTAAATCAGATCAAGCGATCAATGACATCTGCGCTTTGACAAATATCAGAAGG GGCTCTTTGGGTATAATAGCAGCTGAAAAAGGAATTGTAGTTGGAAACATTTTCCTGGAA TTGACAAATGGCAAATCGATTAGTTGTTCTATTGGAGTGCAGATACCACACAGGCTTGAC CAGATCAAAGATGTTTGTGTTGAAATAGGTTCACGCAACATAGAGTATATTCTTGTTGTG GAAAAGCATACAATGTTGAATTATCTACTAGAGATGGACTATCACACCAATAACAACTGT ATAATTCTGACAGGATGTGGCATGCCAACCCTCCAAACAAGGGATTTCCTCAGATTCTTG AAACAACGCACTGGACTACCTGTCTTTGGACTTTGTGATCCAGATCCTGAAGGTATAAGT ATTCTTGCTACGTATGCTAGAGGGTCTTGCAATTCAGCATATGACAATTTCAATATTTCC GTGCCATCTATTTGTTGGGTTGGATTGTCATCCTCAGACATGATAAAGTTGAATTTGTCT GAGACCAACTACTCACGTTTGTCTCGCGAGGACAAAACTATGTTGAAGAACCTTTGGCAG GACGATTTGTCCGATGTATGGAAACGCAGAATCGAAGAAATGATAAGTTTTGACAAGAAG GCCTCTTTTGAAGCTATTCATAGTTTGGGGTTTGATTATTTTGCAACCAATTTGCTTCCG GATATGATTAACAAAGTACGAGAAGGCTATGTTCAGGTTCAAGAGAAAAAAGAGCCTCAA GACACTGAAGCCAGTGAGGACTGA

Peptide Sequence

PEP ID	Os12t0622500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:26578011:26580981:1 gene:Os12g0622500 transcript:Os12t0622500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOPOISOMERASE 6 SUBUNIT A description:Spo11/DNA topoisomerase VI, subunit A family protein. (Os12t0622500-01)
Sequence	MDDSTDDDSYHPRKHYAYDRQVSSSRWRTSREYIRGPGPETHTTESAQDGQDPPAGVYSY GYFSGSGNDPQVQGHFVPEIQKYNPYVIFKGEQLPVPIWELPEEKVQDFHDRYFIAKDKS RVEARKTLNRLLEGNINTIERGHGYKFNIPKYTDNMEFNEEVKVSLAKAGKTISRSFCNA NQREVASRTGYTIDLIERTLGAGLNISKRTVLYTNKDLFGDQSKSDQAINDICALTNIRR GSLGIIAAEKGIVVGNIFLELTNGKSISCSIGVQIPHRLDQIKDVCVEIGSRNIEYILVV EKHTMLNYLLEMDYHTNNNCIILTGCGMPTLQTRDFLRFLKQRTGLPVFGLCDPDPEGIS ILATYARGSCNSAYDNFNISVPSICWVGLSSSDMIKLNLSETNYSRLSREDKTMLKNLWQ DDLSDVWKRRIEEMISFDKKASFEAIHSLGFDYFATNLLPDMINKVREGYVQVQEKKEPQ DTEASED

Transcript Sequence

Transcript ID	Os12t0622500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:26578011:26580981:1 gene:Os12g0622500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOPOISOMERASE 6 SUBUNIT A description:Spo11/DNA topoisomerase VI, subunit A family protein. (Os12t0622500-01)
Sequence	GAGGGGAATTTCTTGCCTCTCGCTCAGATCCGTTCCTCCGGCGAAAAGCGACGGCGACTT TGTTGACGCTGCGGCCTCTTCCCGACCGCGCAGCAAAGATTTGAGGTCACCAATGGATGA TTCAACGGATGACGATTCGTATCATCCAAGAAAACACTATGCTTATGATCGTCAGGTTTC TTCAAGCAGATGGCGTACCAGCCGCGAGTATATCAGAGGTCCCGGCCCCGAAACTCATAC TACTGAGAGTGCTCAAGATGGACAGGATCCACCTGCTGGAGTATATTCCTATGGTTATTT TTCTGGCAGTGGTAATGATCCTCAAGTTCAAGGACACTTTGTTCCGGAGATTCAAAAGTA CAACCCTTACGTGATTTTCAAAGGTGAACAACTCCCGGTTCCTATATGGGAACTGCCAGA GGAGAAGGTCCAAGATTTTCATGATAGGTACTTTATTGCAAAAGACAAGAGTCGAGTTGA AGCCAGGAAGACTCTGAATAGGTTGTTAGAGGGGAACATCAATACAATTGAAAGGGGACA TGGATATAAATTCAATATTCCAAAATATACAGATAACATGGAGTTTAATGAGGAAGTCAA GGTTTCTCTAGCAAAAGCAGGCAAGACCATAAGCCGTTCCTTTTGCAATGCGAATCAGCG GGAAGTTGCATCTAGGACTGGCTATACCATTGATCTAATAGAACGGACACTTGGGGCTGG ATTGAACATCTCGAAGAGAACTGTCTTATACACAAACAAGGATCTGTTTGGGGATCAAAG TAAATCAGATCAAGCGATCAATGACATCTGCGCTTTGACAAATATCAGAAGGGGCTCTTT GGGTATAATAGCAGCTGAAAAAGGAATTGTAGTTGGAAACATTTTCCTGGAATTGACAAA TGGCAAATCGATTAGTTGTTCTATTGGAGTGCAGATACCACACAGGCTTGACCAGATCAA AGATGTTTGTGTTGAAATAGGTTCACGCAACATAGAGTATATTCTTGTTGTGGAAAAGCA TACAATGTTGAATTATCTACTAGAGATGGACTATCACACCAATAACAACTGTATAATTCT GACAGGATGTGGCATGCCAACCCTCCAAACAAGGGATTTCCTCAGATTCTTGAAACAACG CACTGGACTACCTGTCTTTGGACTTTGTGATCCAGATCCTGAAGGTATAAGTATTCTTGC TACGTATGCTAGAGGGTCTTGCAATTCAGCATATGACAATTTCAATATTTCCGTGCCATC TATTTGTTGGGTTGGATTGTCATCCTCAGACATGATAAAGTTGAATTTGTCTGAGACCAA CTACTCACGTTTGTCTCGCGAGGACAAAACTATGTTGAAGAACCTTTGGCAGGACGATTT GTCCGATGTATGGAAACGCAGAATCGAAGAAATGATAAGTTTTGACAAGAAGGCCTCTTT TGAAGCTATTCATAGTTTGGGGTTTGATTATTTTGCAACCAATTTGCTTCCGGATATGAT TAACAAAGTACGAGAAGGCTATGTTCAGGTTCAAGAGAAAAAAGAGCCTCAAGACACTGA AGCCAGTGAGGACTGATTTGGAGGACTCTAATGCAGCTAGAGATTCAGATCCATAAGTTT CTACAAGTAAAAGTTGGAGCAGCAGATTGGAACTGCATGTTGATTTTTGTGGATGCTCAA GCTTCACTCGTATGTTTGGCTTCTGATAAGTCTGTAATAGCTTAGCAGCACAATTATTAT AGTTGTCTTCTAGGTGATCGATCTCCTAAATACTTGCACCACTATTATTGTAGTTGTCTT TTATGTGATCGATCTCCTAAGTACCTTTCTGTCTGTAATAGTTTAGCAACACCATTATTA TAGTACTAGTTATCGTCTAGGTGATCGATCTCTCCTAAGTGCTTGCACTATTGTTACTGA AGTTGTCTTCTAGCACTATTGGTACTGCAGTTGTTTTTTCGCTGATCG