Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0620000-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:26415934:26419191:1 gene:Os12g0620000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein. (Os12t0620000-00)
Sequence	ATGGGGAGAGGCAGCGAGATGCATGGCCAATGTTTGTTCATCATCGTTTTCCTCATCCAT TCTGTCCATGTCCTCCCCGGGTGCATAGCTCAGTCTAGTGATGAGCAAACACTGCTTGCA TTCAAGGCCGCCATCTCCGGTGACCCAAACGGGGTTCTTGATACATGGGTCACTACCAAG GGAAGCATGAATGCCACAGACAGCATCTGCCGGTGGCGCGGTGTGTCGTGCCGATCCAGG CAGCACCCTGGTCGTGTGACAGCGCTGGAGCTCATGTCATCCAACTTGATGGGTGTGATA AGCCCAAGTCTGTCCAATCTTTCCTTCCTCCACACACTCAACCTCTCTGGCAACCGTCTC ACTGGTGGCATCCCGTTGGAGCTTGGCCAGCTACCTCGCATACGGGTCATCAGCCTTGGT GGGAATTCTCTGATCGGTAACATACCTGTGTCTCTCACCAATTGTGCTCGACTCACACAT CTCGAGTTACCACGGAATGGATTGCATGGTGAGATTCCAGCGAACTTCAGCAACTGCAGG GAACTCCGGGTGTTCAATATCAGTGCGAACAGCCTGTCTGGTGGCATCCCCGCATCATTC GGGTCACTGTCGAAGCTTGAGTTCTTGGGCCTGCATCGGAGCAACCTCATCGGCGGCATC CCACCATCATTGGGTAACATGTCCTCACTGTTAGCTTTTGATGCCAGTGAGAATTCCAAC CTTGGAGGTAGCATACCTGACACTCTGGGTAGACTCACAAAGCTGAACTTTCTGAGGTTA GCTTTTGCTGGTCTTGGAGGGGCAATTCCATTCTCGTTGTATAACATTTCATCCCTTACT GTACTTGACTTGGGAAACAATGATCTGTCTGGTATGCTGCCGCCTGACTTCGGCATCACC CTCCCGAGAATCCAGTTTCTTAATCTGTACAACTGTCGGCTCCAAGGAAGCATCCCACCA TCGATAGGAAATGCGACGAAACTCCGTCGGATCCAGCTTCAGAGCAACGGTCTGCAGGGA ATTGTGCCACCTGACATTGGTAGGCTGAAGGATCTCGATAAGCTGAACCTTCAGTTCAAC CAGTTGGAGGACAAGTGGGACAAGGACTGGCCACTGATGGCTGCCTTAGGGAATTGCAGT AGGCTTTTTGCACTGAGCCTCTCAAGCAATAAGTTTGAAGGTGATCTGCCGGCTTCTCTT GTCAACCTCACAATTGGAATAGAGAAAATCTTTATGAATGAAAACAGGATAAGCGGTGCC ATTCCCTCGGAGATTGGCAAGTTCAGAAATCTTGATGTTCTTGCTCTTGCTGACAATGCA CTGACGGGCACCATACCAGACACAATTGGTGGTCTCAGCAGCATGACCGGGCTAGATGTC TCAGGCAATAACATATCCGGTGAAATCCCGCCAATGCTGGTTGCAAACCTTTCTAAGCTC GCTTTCCTGGACCTATCAGAGAATGACATGGAGGGAAGCATACCTCTGAGCTTTGAGAGA ATGAGCAGTATTGCAATCCTGGACTTGTCTTACAATCAGTTCAGTGGCATGTTACCGAAA CAAGTTCTGAGCCTCTCGTCTCTAACCTTGTTCCTGAACTTGTCTCACAACACTTTCTCA GGTCCAATTCCTTCAGAAGTTGGCAGATTAAGCAGCCTTGGGGTTCTCGACTTGTCAAAC AATAGGCTGTCTGGAGAGATACCACAGGCGCTAGCTGGGTGTCAATCGATGGAGTACTTG TTTCTGCAAGGAAACCAATTTGGTGGCAGAATTCCCCAATCTCTTGTATCTCTGAAAGGG CTTCAACACCTTGACATGTCACAGAATAACTTGTCTGGTCCAATTCCAGATTTCCTTGCA ACTTTTCAGTACTTGCGATACTTAAACTTGTCCTACAACCAGCTTGATGGACCGGTGCCA ACAACTGGAGTGTTCAATGCTACGAAAGACTTCTTTGTTGGTGGTAACAGAGTTTGTGGT GGTGTTTCAGAGTTGCAGCTACCGAAATGTCCTGATCGCGCTGGTAAGGGCTCACATAGA TCAAGAACTGTGCTGATTGTGTCAGTTTCTGTTGGATCTTTCGTGGCTCTAGTCCTCATC GCAGGCGCCCTTTTTGTATGTGTTCTGAAGCCAATGAAACAGGTTATGCAGAGTAATGAG ACATCTCCTCGACCATTATTGATGGAGCAACACTGGAAATTATCCTATGCAGAACTACAT AGGGCTACTGACGGGTTCTCTGCAGCTAACCTGATTGGTGTTGGAAGCTTTGGCTCAGTG TACAAAGGAGTTGTAGGCTCTGAAGAGGAGGAAGTCGCAATAAAAGTCCTGAATCTTCTG CAGCATGGAGCCGAGCGGAGTTTCTTGGCTGAGTGTGAGGCGCTAAGAAGTGTTCGGCAT CGCAATCTTGTAAAGATCATCACAGCCTGTTCGACCGTGGATCACTATGGTAATGATTTC AAAGCTTTGGTGTATGAGTTCATGCCTAACAGGGACCTGGACAAATGGCTCCATCCGACC ATTGATGATGATGATGAGAGTTTCTCACGGGTGTTAACCATGTCTGAAAGACTGAGGATT GCGCTGGATGTTGCTGAAGCTCTCGATTACCTGCACCGCCATGGCCAAGTGCCCATTGTT CACTGTGATCTGAAGCCAAGCAATGTCCTTCTTGACAATGACATGGTCGCCCATGTAGGG GACTTTGGGCTGTCACGGTTTGTGCTGGGAACAAACAACAATTCCATACAGTATTCTAGT ATTTCAGCTGGGATCAAAGGCACTGTCGGATATATTCCTCCAGAATATGGAATGGGTGGT GAAATTTCAGTGGAGGGGGATGTCTACAGTTACGGAATCCTGCTGCTTGAGATGTTCACT GCAAAGAGGCCAACAGATGATTTGTTTCAGGGAAGTAGAAGCATCCGCAGCTATGTTGCA ACGGCTTATCCTGACAGGGCCATGGAGATTGTTGATCAAGCAATGTTGCAGCTTAAAGAG AAAGATATGTTTGAAAAGAAGACCGAAGGATGTATAATGTCAGTTCTCAGAGTGGCGCTG CAATGTACAGAGGACTCCCCGAGAGCAAGGATGCTCACAGGATATGTCATCAGAGAGCTA ATTTCTGTGAGGAATACTTATGAAGGTTAG

Peptide Sequence

PEP ID	Os12t0620000-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:26415934:26419191:1 gene:Os12g0620000 transcript:Os12t0620000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein. (Os12t0620000-00)
Sequence	MGRGSEMHGQCLFIIVFLIHSVHVLPGCIAQSSDEQTLLAFKAAISGDPNGVLDTWVTTK GSMNATDSICRWRGVSCRSRQHPGRVTALELMSSNLMGVISPSLSNLSFLHTLNLSGNRL TGGIPLELGQLPRIRVISLGGNSLIGNIPVSLTNCARLTHLELPRNGLHGEIPANFSNCR ELRVFNISANSLSGGIPASFGSLSKLEFLGLHRSNLIGGIPPSLGNMSSLLAFDASENSN LGGSIPDTLGRLTKLNFLRLAFAGLGGAIPFSLYNISSLTVLDLGNNDLSGMLPPDFGIT LPRIQFLNLYNCRLQGSIPPSIGNATKLRRIQLQSNGLQGIVPPDIGRLKDLDKLNLQFN QLEDKWDKDWPLMAALGNCSRLFALSLSSNKFEGDLPASLVNLTIGIEKIFMNENRISGA IPSEIGKFRNLDVLALADNALTGTIPDTIGGLSSMTGLDVSGNNISGEIPPMLVANLSKL AFLDLSENDMEGSIPLSFERMSSIAILDLSYNQFSGMLPKQVLSLSSLTLFLNLSHNTFS GPIPSEVGRLSSLGVLDLSNNRLSGEIPQALAGCQSMEYLFLQGNQFGGRIPQSLVSLKG LQHLDMSQNNLSGPIPDFLATFQYLRYLNLSYNQLDGPVPTTGVFNATKDFFVGGNRVCG GVSELQLPKCPDRAGKGSHRSRTVLIVSVSVGSFVALVLIAGALFVCVLKPMKQVMQSNE TSPRPLLMEQHWKLSYAELHRATDGFSAANLIGVGSFGSVYKGVVGSEEEEVAIKVLNLL QHGAERSFLAECEALRSVRHRNLVKIITACSTVDHYGNDFKALVYEFMPNRDLDKWLHPT IDDDDESFSRVLTMSERLRIALDVAEALDYLHRHGQVPIVHCDLKPSNVLLDNDMVAHVG DFGLSRFVLGTNNNSIQYSSISAGIKGTVGYIPPEYGMGGEISVEGDVYSYGILLLEMFT AKRPTDDLFQGSRSIRSYVATAYPDRAMEIVDQAMLQLKEKDMFEKKTEGCIMSVLRVAL QCTEDSPRARMLTGYVIRELISVRNTYEG

Transcript Sequence

Transcript ID	Os12t0620000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:26415934:26419191:1 gene:Os12g0620000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein. (Os12t0620000-00)
Sequence	ATGGGGAGAGGCAGCGAGATGCATGGCCAATGTTTGTTCATCATCGTTTTCCTCATCCAT TCTGTCCATGTCCTCCCCGGGTGCATAGCTCAGTCTAGTGATGAGCAAACACTGCTTGCA TTCAAGGCCGCCATCTCCGGTGACCCAAACGGGGTTCTTGATACATGGGTCACTACCAAG GGAAGCATGAATGCCACAGACAGCATCTGCCGGTGGCGCGGTGTGTCGTGCCGATCCAGG CAGCACCCTGGTCGTGTGACAGCGCTGGAGCTCATGTCATCCAACTTGATGGGTGTGATA AGCCCAAGTCTGTCCAATCTTTCCTTCCTCCACACACTCAACCTCTCTGGCAACCGTCTC ACTGGTGGCATCCCGTTGGAGCTTGGCCAGCTACCTCGCATACGGGTCATCAGCCTTGGT GGGAATTCTCTGATCGGTAACATACCTGTGTCTCTCACCAATTGTGCTCGACTCACACAT CTCGAGTTACCACGGAATGGATTGCATGGTGAGATTCCAGCGAACTTCAGCAACTGCAGG GAACTCCGGGTGTTCAATATCAGTGCGAACAGCCTGTCTGGTGGCATCCCCGCATCATTC GGGTCACTGTCGAAGCTTGAGTTCTTGGGCCTGCATCGGAGCAACCTCATCGGCGGCATC CCACCATCATTGGGTAACATGTCCTCACTGTTAGCTTTTGATGCCAGTGAGAATTCCAAC CTTGGAGGTAGCATACCTGACACTCTGGGTAGACTCACAAAGCTGAACTTTCTGAGGTTA GCTTTTGCTGGTCTTGGAGGGGCAATTCCATTCTCGTTGTATAACATTTCATCCCTTACT GTACTTGACTTGGGAAACAATGATCTGTCTGGTATGCTGCCGCCTGACTTCGGCATCACC CTCCCGAGAATCCAGTTTCTTAATCTGTACAACTGTCGGCTCCAAGGAAGCATCCCACCA TCGATAGGAAATGCGACGAAACTCCGTCGGATCCAGCTTCAGAGCAACGGTCTGCAGGGA ATTGTGCCACCTGACATTGGTAGGCTGAAGGATCTCGATAAGCTGAACCTTCAGTTCAAC CAGTTGGAGGACAAGTGGGACAAGGACTGGCCACTGATGGCTGCCTTAGGGAATTGCAGT AGGCTTTTTGCACTGAGCCTCTCAAGCAATAAGTTTGAAGGTGATCTGCCGGCTTCTCTT GTCAACCTCACAATTGGAATAGAGAAAATCTTTATGAATGAAAACAGGATAAGCGGTGCC ATTCCCTCGGAGATTGGCAAGTTCAGAAATCTTGATGTTCTTGCTCTTGCTGACAATGCA CTGACGGGCACCATACCAGACACAATTGGTGGTCTCAGCAGCATGACCGGGCTAGATGTC TCAGGCAATAACATATCCGGTGAAATCCCGCCAATGCTGGTTGCAAACCTTTCTAAGCTC GCTTTCCTGGACCTATCAGAGAATGACATGGAGGGAAGCATACCTCTGAGCTTTGAGAGA ATGAGCAGTATTGCAATCCTGGACTTGTCTTACAATCAGTTCAGTGGCATGTTACCGAAA CAAGTTCTGAGCCTCTCGTCTCTAACCTTGTTCCTGAACTTGTCTCACAACACTTTCTCA GGTCCAATTCCTTCAGAAGTTGGCAGATTAAGCAGCCTTGGGGTTCTCGACTTGTCAAAC AATAGGCTGTCTGGAGAGATACCACAGGCGCTAGCTGGGTGTCAATCGATGGAGTACTTG TTTCTGCAAGGAAACCAATTTGGTGGCAGAATTCCCCAATCTCTTGTATCTCTGAAAGGG CTTCAACACCTTGACATGTCACAGAATAACTTGTCTGGTCCAATTCCAGATTTCCTTGCA ACTTTTCAGTACTTGCGATACTTAAACTTGTCCTACAACCAGCTTGATGGACCGGTGCCA ACAACTGGAGTGTTCAATGCTACGAAAGACTTCTTTGTTGGTGGTAACAGAGTTTGTGGT GGTGTTTCAGAGTTGCAGCTACCGAAATGTCCTGATCGCGCTGGTAAGGGCTCACATAGA TCAAGAACTGTGCTGATTGTGTCAGTTTCTGTTGGATCTTTCGTGGCTCTAGTCCTCATC GCAGGCGCCCTTTTTGTATGTGTTCTGAAGCCAATGAAACAGGTTATGCAGAGTAATGAG ACATCTCCTCGACCATTATTGATGGAGCAACACTGGAAATTATCCTATGCAGAACTACAT AGGGCTACTGACGGGTTCTCTGCAGCTAACCTGATTGGTGTTGGAAGCTTTGGCTCAGTG TACAAAGGAGTTGTAGGCTCTGAAGAGGAGGAAGTCGCAATAAAAGTCCTGAATCTTCTG CAGCATGGAGCCGAGCGGAGTTTCTTGGCTGAGTGTGAGGCGCTAAGAAGTGTTCGGCAT CGCAATCTTGTAAAGATCATCACAGCCTGTTCGACCGTGGATCACTATGGTAATGATTTC AAAGCTTTGGTGTATGAGTTCATGCCTAACAGGGACCTGGACAAATGGCTCCATCCGACC ATTGATGATGATGATGAGAGTTTCTCACGGGTGTTAACCATGTCTGAAAGACTGAGGATT GCGCTGGATGTTGCTGAAGCTCTCGATTACCTGCACCGCCATGGCCAAGTGCCCATTGTT CACTGTGATCTGAAGCCAAGCAATGTCCTTCTTGACAATGACATGGTCGCCCATGTAGGG GACTTTGGGCTGTCACGGTTTGTGCTGGGAACAAACAACAATTCCATACAGTATTCTAGT ATTTCAGCTGGGATCAAAGGCACTGTCGGATATATTCCTCCAGAATATGGAATGGGTGGT GAAATTTCAGTGGAGGGGGATGTCTACAGTTACGGAATCCTGCTGCTTGAGATGTTCACT GCAAAGAGGCCAACAGATGATTTGTTTCAGGGAAGTAGAAGCATCCGCAGCTATGTTGCA ACGGCTTATCCTGACAGGGCCATGGAGATTGTTGATCAAGCAATGTTGCAGCTTAAAGAG AAAGATATGTTTGAAAAGAAGACCGAAGGATGTATAATGTCAGTTCTCAGAGTGGCGCTG CAATGTACAGAGGACTCCCCGAGAGCAAGGATGCTCACAGGATATGTCATCAGAGAGCTA ATTTCTGTGAGGAATACTTATGAAGGTTAG