Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0617100-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:26215882:26221809:-1 gene:Os12g0617100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Translation initiation factor eIF-2B delta subunit (eIF-2B GDP-GTP exchange factor) (Guanine nucleotide exchange factor subunit GCD2) (GCD complex subunit GCD2). (Os12t0617100-01)
Sequence	ATGGATCTGCGGCGGCCGACGACGCGCTCCTCGTCGGGGGGAGTGGAGCCGAGGTACCGG CAGGTCGGCTTCGTCACCACCACTGCCGAGCCCGCCGCGGCGGCGGCGTCGTCTTCCTCC TCCCCGCGTGGCTCCGACGTCTACCCGGGGTCGCTCTCCCCCGTGATGATCCCGCCCCCG CGCATCCCCGACCACCTCACCGCCCTTTCTCCCGCCCCCGTCTCGCTCCTGCCCTCCTCC CCGCCGCCGCCTTCGTCATCCCGCCTCGACGCCGCAGAATCCGACCTCGACGACGACGAC GACGACGACGTTGACGTCTCGTGGGCGCGGCCACCTCCACCTGCCCTTCTCGAATCAAAG GAAGGTCTTCCTGATACACAGAATGAAGGTGCTCCAGCTCCAGCCCCAGTTCAACAAAAA CAGAAGCTTTCTAAAGCAGAGAGACGTGCTATTCAGGAAGCTCAGCGTGCAGCCAAAGCT TCTGCAAAGGAGGCAGGGTTATCAAGAAAATCTGTAGCCACAGTTTCTACTTCTAATGCT GCAATGTCAAAACAACTCAAAACTGTAAAGACACCTCCCAAGAAAGATCTGCCCCAACTT ACACCTCCAGTTGCTTCTGAAAAGAAGACTAGTGAGCACCCTCCTGACAGAGATAGAAAG AAAGATGTTCCTCCCCCTCGTATGCAGTTTGATAATGTACATCGGGTGGAGAAAACAAAG AAGCATTCACTGGTCAACCAAGCAGAAGCACAAAACAGAGTCGAATTGTTCAGGCATCTG CCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAGTCAAAATTTTTTCATCTTGAT CTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTTTTGTCTGGTGTTATATCAGGT GGCAATGCTTGTTGCGTAGCAATGCTTCTTGCTTTCAGAGAGGCCATAAAAGATTACTCT ACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCTAAAATCAGTAGCTACGTGTCA TTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGCAATGCTATTAGGTTTTTGAAG AACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCAGAAGCTAAAGCTAGCCTACAG TCTGACATTGATCGGTTTATAAATGAGAAGATAATAATTGCAGACCATGTCATTGTTAGC CATGCAATAGCCAAAGTCAGAGATGATGATGTATTACTGACATACGCATCATCCTCTGTT GTTGAAATGATTTTTGATCATGCTAATGAGCTTGGAAAGAAGTTTCGTGTTGTTGTGGTA GATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCACAGATTAGTTGCAAAGGGCATC AGTTGCACATATACGCACATTAATGCCATCTCATACATCATGCATGAGGTCACAAGGGTT TTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTTTACTCCAGCGTTGGGACAGCA GCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTTTTAGTGTGCTGTGAGGCGTAT AAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCTAATGAACTTGGTGATCCAGAT GTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCACCTTAAAAACTGTACTTATAAT GAAAATCTACAACTTCTGAATCTTAAGTATGACACTATGCCTTCCGACTATGTTTCTATG ATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTGCCAGTCATTGTGAGAGAGTAC CGCAGGGAGCACATATGGATATAG

Peptide Sequence

PEP ID	Os12t0617100-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:26215882:26221809:-1 gene:Os12g0617100 transcript:Os12t0617100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Translation initiation factor eIF-2B delta subunit (eIF-2B GDP-GTP exchange factor) (Guanine nucleotide exchange factor subunit GCD2) (GCD complex subunit GCD2). (Os12t0617100-01)
Sequence	MDLRRPTTRSSSGGVEPRYRQVGFVTTTAEPAAAAASSSSSPRGSDVYPGSLSPVMIPPP RIPDHLTALSPAPVSLLPSSPPPPSSSRLDAAESDLDDDDDDDVDVSWARPPPPALLESK EGLPDTQNEGAPAPAPVQQKQKLSKAERRAIQEAQRAAKASAKEAGLSRKSVATVSTSNA AMSKQLKTVKTPPKKDLPQLTPPVASEKKTSEHPPDRDRKKDVPPPRMQFDNVHRVEKTK KHSLVNQAEAQNRVELFRHLPQYVHGTQLPDLESKFFHLDLMHPSVYKVGLQFLSGVISG GNACCVAMLLAFREAIKDYSTPSTKTLNRDLTAKISSYVSFLIECKPLSISMGNAIRFLK NRIAKLLLTLSESEAKASLQSDIDRFINEKIIIADHVIVSHAIAKVRDDDVLLTYASSSV VEMIFDHANELGKKFRVVVVDSRPNNEGQALLHRLVAKGISCTYTHINAISYIMHEVTRV FLGASSILSNGAVYSSVGTAAVAMVAHAFGVPVLVCCEAYKLHERVQLDSICSNELGDPD VISRVPEREDLCHLKNCTYNENLQLLNLKYDTMPSDYVSMIITEYGMLPPTSVPVIVREY RREHIWI

Transcript Sequence

Transcript ID	Os12t0617100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:26215882:26221809:-1 gene:Os12g0617100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Translation initiation factor eIF-2B delta subunit (eIF-2B GDP-GTP exchange factor) (Guanine nucleotide exchange factor subunit GCD2) (GCD complex subunit GCD2). (Os12t0617100-01)
Sequence	CGCTTCGGCTTCTGCTGCTTCCGCGCAGAAGAAGACCAATTCCTCGCGCCACCTCCACCA CCGCCTCCGCCGCCGCCGTGGACGCCGGGATGGATCTGCGGCGGCCGACGACGCGCTCCT CGTCGGGGGGAGTGGAGCCGAGGTACCGGCAGGTCGGCTTCGTCACCACCACTGCCGAGC CCGCCGCGGCGGCGGCGTCGTCTTCCTCCTCCCCGCGTGGCTCCGACGTCTACCCGGGGT CGCTCTCCCCCGTGATGATCCCGCCCCCGCGCATCCCCGACCACCTCACCGCCCTTTCTC CCGCCCCCGTCTCGCTCCTGCCCTCCTCCCCGCCGCCGCCTTCGTCATCCCGCCTCGACG CCGCAGAATCCGACCTCGACGACGACGACGACGACGACGTTGACGTCTCGTGGGCGCGGC CACCTCCACCTGCCCTTCTCGAATCAAAGGAAGGTCTTCCTGATACACAGAATGAAGGTG CTCCAGCTCCAGCCCCAGTTCAACAAAAACAGAAGCTTTCTAAAGCAGAGAGACGTGCTA TTCAGGAAGCTCAGCGTGCAGCCAAAGCTTCTGCAAAGGAGGCAGGGTTATCAAGAAAAT CTGTAGCCACAGTTTCTACTTCTAATGCTGCAATGTCAAAACAACTCAAAACTGTAAAGA CACCTCCCAAGAAAGATCTGCCCCAACTTACACCTCCAGTTGCTTCTGAAAAGAAGACTA GTGAGCACCCTCCTGACAGAGATAGAAAGAAAGATGTTCCTCCCCCTCGTATGCAGTTTG ATAATGTACATCGGGTGGAGAAAACAAAGAAGCATTCACTGGTCAACCAAGCAGAAGCAC AAAACAGAGTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTG ACCTCGAGTCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGAC TTCAATTTTTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAGCAATGCTTCTTG CTTTCAGAGAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATC TTACTGCTAAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCA GCATGGGCAATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGT CTGAGTCAGAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAATGAGAAGA TAATAATTGCAGACCATGTCATTGTTAGCCATGCAATAGCCAAAGTCAGAGATGATGATG TATTACTGACATACGCATCATCCTCTGTTGTTGAAATGATTTTTGATCATGCTAATGAGC TTGGAAAGAAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCAC TATTGCACAGATTAGTTGCAAAGGGCATCAGTTGCACATATACGCACATTAATGCCATCT CATACATCATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATG GAGCAGTTTACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAG TGCCTGTTTTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTA TATGCTCTAATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATT TGTGCCACCTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATG ACACTATGCCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTA CTAGTGTGCCAGTCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAAT GATATTTTCCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGCGAGAGCAAACAACC AGCCAACAAGGAATGCAGTTTTGGATGTAGATAGGACGGGTCATGCAGGAAAAGTCTCAC ATGTGAACAGATGCTAGATCCAAGGATTTCTAGCTCGCTTGTTATCTTCAGTATTTGTAT TCATACTAAATGTGACTGTTGATTAGTACACAGACTTGTTATCCTGTACTGAGGTGACCA GACATGAATTTCAATGGCACATCAGTTAACACCGCTTTTCTACTTCATC