Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0615900-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:26128861:26130743:1 gene:Os12g0615900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-200 description:WD40/YVTN repeat-like domain containing protein. (Os12t0615900-01)
Sequence	GCCGACCTCGGCCCGCTCCTCGACCCCGCCGCGCCGGTCTCCGCCCTCGCCATCCACTCC CTCGGCCCCGTCCCGCGCAACCTCCTCGCCGCCTCCGACGACGGCCTCCTCCACCTCTAC GACGCCGGCGAGGGGTTCCCGCTCCTCGCCTCGCTCCGCGTCTTCCCGCGCCACCGCGAG CCCGCCGACGCCCTCGCCGTGCACCCCACGGGGCGTGTCGCGCTCGCCGTCGGCCGCTCG GGGGGCCTCGCCATGCTCAACCTCCTCCGCGGCCGCCGCAGCTTCTCCTGCCGCCTCGAG CACCCGGCCACGGCGATCGCCTACGCCGAGGATGGCGCCGGTGGGGACCGCTTCGTGATG GCCGCCGAGGAGAAGGTGACCGTGCACGACTCCGAGGATGCTAGGATCATCCATGAGATC GACTGCGGCAAAAGGGTGCTCGCCTTTGCGCCTGCAAAGAAGGGAATACTTTACACTGGA GGAGAGGAACGCGGTATTACTGCTTGGGATCTTTCCAGTGGCAAGGTTACATCACGCATT GAGGATGCTCATTCAACTCGTGTGAAAGGGATTGTTGTCTTCGACGACAAGAACGATGGA TCTGAACTGTGCAACCTAATTGCTTCGGCCTCATCAGATGGTATAATAAGGATCTGGGAT GCTCGGATGATTGCAAAAGAGAAGACTACTCCATTAGCAGAGGCTAACACAAAAGCAAGG CTGACTTGTCTTGCGGGATCATCATTGAATTGA

Peptide Sequence

PEP ID	Os12t0615900-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:26128861:26130743:1 gene:Os12g0615900 transcript:Os12t0615900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-200 description:WD40/YVTN repeat-like domain containing protein. (Os12t0615900-01)
Sequence	ADLGPLLDPAAPVSALAIHSLGPVPRNLLAASDDGLLHLYDAGEGFPLLASLRVFPRHRE PADALAVHPTGRVALAVGRSGGLAMLNLLRGRRSFSCRLEHPATAIAYAEDGAGGDRFVM AAEEKVTVHDSEDARIIHEIDCGKRVLAFAPAKKGILYTGGEERGITAWDLSSGKVTSRI EDAHSTRVKGIVVFDDKNDGSELCNLIASASSDGIIRIWDARMIAKEKTTPLAEANTKAR LTCLAGSSLN

Transcript Sequence

Transcript ID	Os12t0615900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:26128861:26130743:1 gene:Os12g0615900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-200 description:WD40/YVTN repeat-like domain containing protein. (Os12t0615900-01)
Sequence	CCGCCGACCTCGGCCCGCTCCTCGACCCCGCCGCGCCGGTCTCCGCCCTCGCCATCCACT CCCTCGGCCCCGTCCCGCGCAACCTCCTCGCCGCCTCCGACGACGGCCTCCTCCACCTCT ACGACGCCGGCGAGGGGTTCCCGCTCCTCGCCTCGCTCCGCGTCTTCCCGCGCCACCGCG AGCCCGCCGACGCCCTCGCCGTGCACCCCACGGGGCGTGTCGCGCTCGCCGTCGGCCGCT CGGGGGGCCTCGCCATGCTCAACCTCCTCCGCGGCCGCCGCAGCTTCTCCTGCCGCCTCG AGCACCCGGCCACGGCGATCGCCTACGCCGAGGATGGCGCCGGTGGGGACCGCTTCGTGA TGGCCGCCGAGGAGAAGGTGACCGTGCACGACTCCGAGGATGCTAGGATCATCCATGAGA TCGACTGCGGCAAAAGGGTGCTCGCCTTTGCGCCTGCAAAGAAGGGAATACTTTACACTG GAGGAGAGGAACGCGGTATTACTGCTTGGGATCTTTCCAGTGGCAAGGTTACATCACGCA TTGAGGATGCTCATTCAACTCGTGTGAAAGGGATTGTTGTCTTCGACGACAAGAACGATG GATCTGAACTGTGCAACCTAATTGCTTCGGCCTCATCAGATGGTATAATAAGGATCTGGG ATGCTCGGATGATTGCAAAAGAGAAGACTACTCCATTAGCAGAGGCTAACACAAAAGCAA GGCTGACTTGTCTTGCGGGATCATCATTGAATTGAGCTAAGGAAAGCAGAAATGAAGCGG ACGTGGAGCTAAATTGTTGAATTGAGGCCGTGGTACCAATTTTGTACTCTTTAGTTTTTA GTCTAGTCTCTATAACATATTTGTGTTGGAGAAACAAACCGAGGAGCTCGATGTATGGGA CATGTATGATAGCCATAAGTTATGCATCACCATAGTCTGGCTTGAGGGCCTAAACTGCTT AATGTTTATGCAAGCGCATGGTTCTATTGTATCACCAGTTTTCTATACC