Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0615400-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:26101180:26103543:-1 gene:Os12g0615400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 37 kDa inner envelope membrane protein, chloroplast precursor (E37). (Os12t0615400-01)
Sequence	ATGGCGATGGCCTCCTCCGCCTACGCCCCAGCGGGCGGCGTTGGCACCCACTCCGCGCCG GGCAGGATCAGGCCGCCGCGCGGCCTCGGCTTCTCCACCACCACCACCAAGTCGAGGCCC CTCGTGCTCACCAGGCGTGGGGGAGGCGGCGGCAACATCTCCGTGGCTCGGCTGAGGTGC GCGGCGTCGTCGTCGTCGGCGGCGGCGAGGCCGATGTCGCAGCCGCGGTTCATCCAGCAC AAGAAGGAGGCGTTCTGGTTCTACCGCTTCCTCTCCATCGTCTACGACCACGTCATCAAC CCGGGCCACTGGACGGAGGACATGCGGGACGACGCCCTCGAGCCCGCCGACCTCTACAGC CGCAAGCTCAGGGTCGTCGACGTCGGCGGCGGGACGGGGTTCACCACGCTCGGGATCGTC AAGCGCGTCGACCCGGAGAACGTCACGCTGCTCGACCAGTCCCCGCACCAGCTCGAGAAG GCCCGGGAGAAGGAGGCCCTCAAGGGCGTCACCATCATGGAGGGCGACGCCGAGGACCTC CCCTTCCCCACCGACACCTTCGACCGCTACGTCTCCGCCGGCAGCATCGAGTATTGGCCC GATCCGCAGCGAGGAATCAAGGAAGCTTACAGGGTTTTGAGGCTTGGTGGAGTGGCTTGC ATGATTGGCCCCGTGCACCCAACCTTCTGGCTGTCTCGCTTTTTCGCTGACATGTGGATG CTCTTCCCGAAGGAAGAGGAGTATATTGAGTGGTTCAAAAAGGCAGGGTTCAAGGATGTC AAGCTCAAAAGGATTGGACCAAAATGGTACCGTGGTGTCCGAAGGCATGGCCTGATTATG GGATGCTCTGTGACGGGCGTCAAAAGAGAACATGGAGACTCCCCTTTGCAGCTTGGTCCA AAGGTTGAGGATGTCAGCAAACCTGTGAATCCTATCACCTTCCTCTTCCGCTTCCTCATG GGAACAATATGTGCTGCATACTATGTTCTGGTGCCTATCTACATGTGGATAAAGGACCAG ATTGTGCCCAAAGGCATGCCGATCTAA

Peptide Sequence

PEP ID	Os12t0615400-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:26101180:26103543:-1 gene:Os12g0615400 transcript:Os12t0615400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 37 kDa inner envelope membrane protein, chloroplast precursor (E37). (Os12t0615400-01)
Sequence	MAMASSAYAPAGGVGTHSAPGRIRPPRGLGFSTTTTKSRPLVLTRRGGGGGNISVARLRC AASSSSAAARPMSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLYS RKLRVVDVGGGTGFTTLGIVKRVDPENVTLLDQSPHQLEKAREKEALKGVTIMEGDAEDL PFPTDTFDRYVSAGSIEYWPDPQRGIKEAYRVLRLGGVACMIGPVHPTFWLSRFFADMWM LFPKEEEYIEWFKKAGFKDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKREHGDSPLQLGP KVEDVSKPVNPITFLFRFLMGTICAAYYVLVPIYMWIKDQIVPKGMPI

Transcript Sequence

Transcript ID	Os12t0615400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:26101180:26103543:-1 gene:Os12g0615400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 37 kDa inner envelope membrane protein, chloroplast precursor (E37). (Os12t0615400-01)
Sequence	CTCCTCGCCACTCTCCCCCCTCCCATCCTCTTCCACTCTCTCCTCTCCCCTTCGTGGCGG CGGCGGCGGCGGCGGCGGCGTGACGAGGAGGAGCAATGGCGATGGCCTCCTCCGCCTACG CCCCAGCGGGCGGCGTTGGCACCCACTCCGCGCCGGGCAGGATCAGGCCGCCGCGCGGCC TCGGCTTCTCCACCACCACCACCAAGTCGAGGCCCCTCGTGCTCACCAGGCGTGGGGGAG GCGGCGGCAACATCTCCGTGGCTCGGCTGAGGTGCGCGGCGTCGTCGTCGTCGGCGGCGG CGAGGCCGATGTCGCAGCCGCGGTTCATCCAGCACAAGAAGGAGGCGTTCTGGTTCTACC GCTTCCTCTCCATCGTCTACGACCACGTCATCAACCCGGGCCACTGGACGGAGGACATGC GGGACGACGCCCTCGAGCCCGCCGACCTCTACAGCCGCAAGCTCAGGGTCGTCGACGTCG GCGGCGGGACGGGGTTCACCACGCTCGGGATCGTCAAGCGCGTCGACCCGGAGAACGTCA CGCTGCTCGACCAGTCCCCGCACCAGCTCGAGAAGGCCCGGGAGAAGGAGGCCCTCAAGG GCGTCACCATCATGGAGGGCGACGCCGAGGACCTCCCCTTCCCCACCGACACCTTCGACC GCTACGTCTCCGCCGGCAGCATCGAGTATTGGCCCGATCCGCAGCGAGGAATCAAGGAAG CTTACAGGGTTTTGAGGCTTGGTGGAGTGGCTTGCATGATTGGCCCCGTGCACCCAACCT TCTGGCTGTCTCGCTTTTTCGCTGACATGTGGATGCTCTTCCCGAAGGAAGAGGAGTATA TTGAGTGGTTCAAAAAGGCAGGGTTCAAGGATGTCAAGCTCAAAAGGATTGGACCAAAAT GGTACCGTGGTGTCCGAAGGCATGGCCTGATTATGGGATGCTCTGTGACGGGCGTCAAAA GAGAACATGGAGACTCCCCTTTGCAGCTTGGTCCAAAGGTTGAGGATGTCAGCAAACCTG TGAATCCTATCACCTTCCTCTTCCGCTTCCTCATGGGAACAATATGTGCTGCATACTATG TTCTGGTGCCTATCTACATGTGGATAAAGGACCAGATTGTGCCCAAAGGCATGCCGATCT AAGGGAGATGAACTGAGCTGCAAGAGAGGATAGCCAATATCTGAATTAGGCTTCTCTATA TTAGGCACTTTCTGTCAGTTCTGTATTTACTTCTGTTGTCCCTGTTGTTATGTACTTCTT TTACTGTGGTTCTTGTTTGTGGGGAAATAATATTATGAGACCTTGATTAAGCTCATCCGA ACTCCTGAGCATGGAATGGATCGTGTGTAGCATAATTAGAATGGAC