Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0614600-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:26055221:26056980:1 gene:Os12g0614600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BARREN INFLORESCENCE 2 description:Serine/threonine protein kinase domain containing protein. (Os12t0614600-01)
Sequence

ATGGTGGCGGCGGTGCGCGCGCCGGTGAAGCCGGAGATGGTGGAGCTCTCGCCGGCGGCG
ATGGAGAGGTACTCCTCCGACGCCGACACGACGGCGCCGAACTCGAGCCTTAGCTCGGCG
GCGAGCAGCACGGGGAGCCTCGCGCGGTGCTCGAGCCTGTCGCGCCTGTCGTTCGACTGC
TCGCCGTCGGCCGCCGTGGCGGCGGCGGCGACGTCGTGCTCGCCGCCGCGGGCGTCGGTG
CTGTTGCGGCCGCACAGGTCCGGCGACGTCGCGTGGGCGGCCATCCGCGCGGCTTCGACG
ACCTCCGCGGCGCCGCTAGGCCCGCGGGACTTCAAGCTCGTGCGGCGCATCGGCGGCGGC
GACATCGGGACGGTGTACCTGTGCCGCCTCCGGAGCTCGCCGGAGAGGGAGAGCCCGTGC
ATGTACGCGATGAAGGTGGTGGACCGGAGGGCGGTGGCGAGGAAGCAGAAGCTGGGGCGC
GCGGCGGCGGAGAAGCGGATCCTGCGGCAGCTGGACCACCCCTTCCTCCCCACCCTCTTC
GCCGACTTCGACGCCACGCCGCACTTCTCCTGCGCCGTCATGGAGTTCTGCCCCGGCGGC
GACCTCCACTCCCTCCGCCACCGCATGCCGTCCCGCCGCTTCCCGCTCCCCTCCGCCCGC
TTCTACGCCGCCGAGGTGCTCCTCGCCATCGAGTACCTCCACATGATGGGCATCGTCTAC
CGCGACCTCAAGCCCGAGAACGTCCTCATCCGCGCCGACGGCCACATCATGCTCACCGAC
TTCGACCTCTCGCTGCAGTCCACCACCTCGCCGTCTCTCGACGGCGACACCGACACCGAC
GACGAGGCCAGCGGTGGCGCGTCCTGCTTCCCGGACCACCTCCTCCGGTTCAAGCGGCGG
CGGAACGCCGTGGCGGCGCCGCGTCCGCGGTTCGTGGCGGAGCCGGTGGATGCGAGGTCG
TGCTCGTTCGTGGGGACGCACGAGTACGTGGCCCCCGAGGTGGCGAGCGGCGGCGCGCAT
GGCGCGGCCGTGGACTGGTGGGCGTACGGGGTGTTCCTCTACGAGCTCATCTACGGCCGT
ACGCCGTTCGCCGGCGCTACAAACGAGGCGACGCTCCGCAACATCGTCCGCCGCCCGCTC
GCCTTCCCCTCCGGCTCCGGCTCGTGCGGTCCCGCCGACGCCGACGCGCGCGACCTCATC
GCCCGCCTCCTCGCCAAGGACCCCGCCGCCCGCCTCGGCTCCCGCCGCGGCGCCGCCGAC
GTCAAGTCCCACCCCTTCTTCAAGTCCCTCAACCTCGCCCTCCTCCGTTCGTCGCGCCCG
CCCGTCGTCCCCGGCGCCGGCGCCGGCGCCGCGCCGCTACACCGGTCGCAGTCGTGCAAG
GCGGCGCCGACAACGCCGCCGCCGCCGACGACGACGAAGCCGGCGAACGCCACCGCGCGG
TTCGACCTCTTCTGA

Peptide Sequence

PEP ID

Os12t0614600-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:26055221:26056980:1 gene:Os12g0614600 transcript:Os12t0614600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BARREN INFLORESCENCE 2 description:Serine/threonine protein kinase domain containing protein. (Os12t0614600-01)
Sequence

MVAAVRAPVKPEMVELSPAAMERYSSDADTTAPNSSLSSAASSTGSLARCSSLSRLSFDC
SPSAAVAAAATSCSPPRASVLLRPHRSGDVAWAAIRAASTTSAAPLGPRDFKLVRRIGGG
DIGTVYLCRLRSSPERESPCMYAMKVVDRRAVARKQKLGRAAAEKRILRQLDHPFLPTLF
ADFDATPHFSCAVMEFCPGGDLHSLRHRMPSRRFPLPSARFYAAEVLLAIEYLHMMGIVY
RDLKPENVLIRADGHIMLTDFDLSLQSTTSPSLDGDTDTDDEASGGASCFPDHLLRFKRR
RNAVAAPRPRFVAEPVDARSCSFVGTHEYVAPEVASGGAHGAAVDWWAYGVFLYELIYGR
TPFAGATNEATLRNIVRRPLAFPSGSGSCGPADADARDLIARLLAKDPAARLGSRRGAAD
VKSHPFFKSLNLALLRSSRPPVVPGAGAGAAPLHRSQSCKAAPTTPPPPTTTKPANATAR
FDLF

Transcript Sequence

Transcript ID

Os12t0614600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:26055221:26056980:1 gene:Os12g0614600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BARREN INFLORESCENCE 2 description:Serine/threonine protein kinase domain containing protein. (Os12t0614600-01)
Sequence

ACTTCACCACCGCACAGCGAGCTCGCCGCGGAGAGCTTTCGCCGGAGAGGTAGACGACGA
CGGCGACGACAGTGTCACGTGCTCACGTTCATGGTGGCGGCGGTGCGCGCGCCGGTGAAG
CCGGAGATGGTGGAGCTCTCGCCGGCGGCGATGGAGAGGTACTCCTCCGACGCCGACACG
ACGGCGCCGAACTCGAGCCTTAGCTCGGCGGCGAGCAGCACGGGGAGCCTCGCGCGGTGC
TCGAGCCTGTCGCGCCTGTCGTTCGACTGCTCGCCGTCGGCCGCCGTGGCGGCGGCGGCG
ACGTCGTGCTCGCCGCCGCGGGCGTCGGTGCTGTTGCGGCCGCACAGGTCCGGCGACGTC
GCGTGGGCGGCCATCCGCGCGGCTTCGACGACCTCCGCGGCGCCGCTAGGCCCGCGGGAC
TTCAAGCTCGTGCGGCGCATCGGCGGCGGCGACATCGGGACGGTGTACCTGTGCCGCCTC
CGGAGCTCGCCGGAGAGGGAGAGCCCGTGCATGTACGCGATGAAGGTGGTGGACCGGAGG
GCGGTGGCGAGGAAGCAGAAGCTGGGGCGCGCGGCGGCGGAGAAGCGGATCCTGCGGCAG
CTGGACCACCCCTTCCTCCCCACCCTCTTCGCCGACTTCGACGCCACGCCGCACTTCTCC
TGCGCCGTCATGGAGTTCTGCCCCGGCGGCGACCTCCACTCCCTCCGCCACCGCATGCCG
TCCCGCCGCTTCCCGCTCCCCTCCGCCCGCTTCTACGCCGCCGAGGTGCTCCTCGCCATC
GAGTACCTCCACATGATGGGCATCGTCTACCGCGACCTCAAGCCCGAGAACGTCCTCATC
CGCGCCGACGGCCACATCATGCTCACCGACTTCGACCTCTCGCTGCAGTCCACCACCTCG
CCGTCTCTCGACGGCGACACCGACACCGACGACGAGGCCAGCGGTGGCGCGTCCTGCTTC
CCGGACCACCTCCTCCGGTTCAAGCGGCGGCGGAACGCCGTGGCGGCGCCGCGTCCGCGG
TTCGTGGCGGAGCCGGTGGATGCGAGGTCGTGCTCGTTCGTGGGGACGCACGAGTACGTG
GCCCCCGAGGTGGCGAGCGGCGGCGCGCATGGCGCGGCCGTGGACTGGTGGGCGTACGGG
GTGTTCCTCTACGAGCTCATCTACGGCCGTACGCCGTTCGCCGGCGCTACAAACGAGGCG
ACGCTCCGCAACATCGTCCGCCGCCCGCTCGCCTTCCCCTCCGGCTCCGGCTCGTGCGGT
CCCGCCGACGCCGACGCGCGCGACCTCATCGCCCGCCTCCTCGCCAAGGACCCCGCCGCC
CGCCTCGGCTCCCGCCGCGGCGCCGCCGACGTCAAGTCCCACCCCTTCTTCAAGTCCCTC
AACCTCGCCCTCCTCCGTTCGTCGCGCCCGCCCGTCGTCCCCGGCGCCGGCGCCGGCGCC
GCGCCGCTACACCGGTCGCAGTCGTGCAAGGCGGCGCCGACAACGCCGCCGCCGCCGACG
ACGACGAAGCCGGCGAACGCCACCGCGCGGTTCGACCTCTTCTGAGCATATTGACCGTTG
CTGTCTGCTACTACCTACCCGCGTCGTCGCCGACATCGCCGGCGGGAGACACGCTCCGGC
CACCGTGACATTAATTTCTCGTTGACCCTTAGCTACCGCGTTGAATGTACACACTGTTAA
TTAATTACTACTCCTAGTTAATCACTGCTAATCACCTTGCTGTTAGTACTACTAAACTAA
TATAATCTAGTGGCTTAATT