Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0614000-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:26021767:26026110:1 gene:Os12g0614000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator complex protein OsMED19a description:Conserved hypothetical protein. (Os12t0614000-01)
Sequence

ATGGATTCTGATGACAAGAAGTTTGGAAAAGGCCCTAGGGAGCTCACTGGTGCTGTTGAT
TTAATAAGCCACTATAAATTGCTTGCCCACCATGATTTCTTTTGCAAGAAGCCTTTGCCA
TTGGCAATATCAGATACACATTATCTTGACAATGTTGTTGGGGACACTGAAATTCGTAAA
GGAGAAGGAATGGAGCTAGATCAGCTGGTTCAGAACGCATACTTGAGGGACAAGCCTGCT
TATATCCAGCCGTTTGACATGGAAACACTGGGGCAAGCATTTCAGCTTCGAGAAACGGCT
CCAGTAGATTTGCCCTCTGCTGAAAAGGGTATACCGACTATATCTGGTAAACTGAAAAGT
GAGTCCAAAGACAAAGAGAAGAAGCATAAAAAGCACAAAGACAAAGACAGGGACAAAGAC
AAGGAGCATAAGAAGCACAAACATCGGCATAAAGATAGGAGTAAAGACAAAGACAAAGAC
AAGGATAAGGACAAGAAAAAGGATAAAAGTGGGCATCATGATTCTGGTGGCGATCATTCA
AAGAAACATCATGAGAAGAAAAGGAAGCATGAGGGAATGGAGGATTCAGCCGATGTGCAT
AAGCACAAGAAAAGTAAGCACAAGAGTTCCAGAACAGATGACACAGGGAATGGACTTAGT
TAG

Peptide Sequence

PEP ID

Os12t0614000-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:26021767:26026110:1 gene:Os12g0614000 transcript:Os12t0614000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator complex protein OsMED19a description:Conserved hypothetical protein. (Os12t0614000-01)
Sequence

MDSDDKKFGKGPRELTGAVDLISHYKLLAHHDFFCKKPLPLAISDTHYLDNVVGDTEIRK
GEGMELDQLVQNAYLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEKGIPTISGKLKS
ESKDKEKKHKKHKDKDRDKDKEHKKHKHRHKDRSKDKDKDKDKDKKKDKSGHHDSGGDHS
KKHHEKKRKHEGMEDSADVHKHKKSKHKSSRTDDTGNGLS

Transcript Sequence

Transcript ID

Os12t0614000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:26021767:26026110:1 gene:Os12g0614000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator complex protein OsMED19a description:Conserved hypothetical protein. (Os12t0614000-01)
Sequence

GGTCGGTCGGACTCGCCTCGCCTCTCCCCGAATCCCGCCGCCGCCGCCGCCGCCGCCGAC
GAGACTCGACGCCTCCTCTCCTCCCTCCCCGCTCCTCTTCGGGCCCGGAGCTCGGCGGGG
GTGGAGCGGAGACACACACACGACCCGGCGGGCCGGTTCTTTCCCCCCCTTATCCGGTGA
GGAAGCCCTAGCTTTTGCTTGGGTGGGCGGGTGGGGTGGGGTGGGTTTGGTTACTTGGTT
CTAAAGTTTGACCTAATCTGAGTTGCTTCTCTCGCTGTTGCTGCGAGCAATTGAACCCGA
TTCCGAATCTTTCCCGGGGCGCTGCCACGTCCAATCGGTGTAATTCCAGTTGAGGGTTTG
ATGGGGGAGCTGTGGAACTAGGGTTTTCGAGTTGAATATACTATGCTCTGCTGGGTTCAT
TGCACACTTGCAGTAGCAGAGGAGTGCGTTTTTTTTGTTATGTGCCGAACTCTAGCGCAG
TTCGCATGATCATCAATTTAGTGACGATAGAAACATGCCGCCATATGCTGTGCATTTTCC
CCCACAACAAGAATGGCGTGCTAGAAAAATGTTTTGTGTGACTTTTAACTCCAAAAGGGA
AAGGAGGAGTAAAAACTGTTGCTCTTTTTTTGTAGGGAGAAGATAAATTTGTTCCTCTGG
TCTGGCGAGCATTAATCTTTCAGTTTCTAGTAGTGGGCTCTTGGAGATTTGAGCTGATTT
CAAACAATGTAGGTAAAGGTTGTAGGGTTCATACGGTTTATGGCTTGGTCCGTTAGAAAT
AGAGCATACCAAGCCACCAACGCTCTACCCGCTAACCCAGAGTTGTGTTGGGCACATTAA
TCTTCTAGACTTTGGGGTCAATGTCAAAGTTTGTGAGTAGAACTTTAGATTATTTACAAA
ATGTTGCTTGGATCTGCTAGAAAGTAGATCACACAAAGGTTCTGTCTGCTAACCAAGAGA
TGTTTTTGGATGCATGCTCCACGTCCTTATGTCTCTCCAGTTTTACTGTATCAATCTTGG
GCTATGTTACTGCTTCATTCATGTTCAACAAAGAAATAGAGAGTTAGAGATCCATCTCCC
AACTTTGTTACTACTCTGTTATTACTTTGATACTATGTGGAACAAGAGAATTATGTTGTC
AGTATAGAAATGTACACAATCTTCAGTTTTCCAGTATCGTAAAAATTGTGAAAGAAAACC
AGTTTTAAAACTCATAGAGCCACTTAAGTTTCCTCGTTGTGATACTTTGACAGTTCGACA
GTAAGTACTAAGAAGTTCAAGAAAACTAAGATATATGTTCCATAATATGAGAATATTTAT
TGTAAGTGTCTTCCAGGATTGGTGGAGTTTAGCTTATCAATCTGTTTATTAATATTTACG
CAGTATTGCAGTCATGGCATTATGTGGTTGAATATATAGATGGATAATAGATGATCTAAT
TTGAAATGTGATAAATTGTTTTCAATAAATGGGTCTGCTTTTGGGAAATGAAAATCAATT
TTGTTTTGGTAGATATTCTGTTTCCGGGAACAGGGATCGATTAAGCCACAGTGTAAGTTC
ATACTGTGACCTATTGACTTTGCTTTTGTACGCTAGTTGTAAAATTTTGTTCAATTGAAT
TTCAGGTGAATATGCACTGTGCTTAGGCTAAGATTCAACCTGATGGATTCTGATGACAAG
AAGTTTGGAAAAGGCCCTAGGGAGCTCACTGGTGCTGTTGATTTAATAAGCCACTATAAA
TTGCTTGCCCACCATGATTTCTTTTGCAAGAAGCCTTTGCCATTGGCAATATCAGATACA
CATTATCTTGACAATGTTGTTGGGGACACTGAAATTCGTAAAGGAGAAGGAATGGAGCTA
GATCAGCTGGTTCAGAACGCATACTTGAGGGACAAGCCTGCTTATATCCAGCCGTTTGAC
ATGGAAACACTGGGGCAAGCATTTCAGCTTCGAGAAACGGCTCCAGTAGATTTGCCCTCT
GCTGAAAAGGGTATACCGACTATATCTGGTAAACTGAAAAGTGAGTCCAAAGACAAAGAG
AAGAAGCATAAAAAGCACAAAGACAAAGACAGGGACAAAGACAAGGAGCATAAGAAGCAC
AAACATCGGCATAAAGATAGGAGTAAAGACAAAGACAAAGACAAGGATAAGGACAAGAAA
AAGGATAAAAGTGGGCATCATGATTCTGGTGGCGATCATTCAAAGAAACATCATGAGAAG
AAAAGGAAGCATGAGGGAATGGAGGATTCAGCCGATGTGCATAAGCACAAGAAAAGTAAG
CACAAGAGTTCCAGAACAGATGACACAGGGAATGGACTTAGTTAGCTACACTTTCCTTAG
TTCGATTGTCAATCCATGTCATATGTCCTTAAAAAGGAGGCTCAGAAGGTTTCTGTCATC
AAAACCCACCGCAGTAGTGATACCATGAATATATATTTAGTTGAAGCTGTTTCAGAAGAA
CACGTCTTGCCTGCTATTTATGTTGGTTTTGCAGCGTCGATCCTGGGGAACATGTAACTC
GTAAAATAGGGACTAACCCACTTTATTGTGCAATTCTTTTGTTTCCTGGCCAAATGGTTG
TAGGAACACTTGTCGATGACTCCCAACTTGAAATTTCTGGAGATTAGGCGTAGACTATTT
CAGATCAGGTTTCTGGTTAGCATTAACAGTGTTGGATAGATCTAGAAATGCGTTTGTCGG
AGGGGAATGAGAAATTAACTTGTATTCAGAAAAAAAAACTAATTCTTCTATATACTTCTA
TCTGTTATCAAGGAAGATTGTTAATTTTGCAGCCATTGAGAAATGCAATGATTTATTTTG
T