Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0613250-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:25977889:25982348:-1 gene:Os12g0613250 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 17, SKIPa-interacting protein 17, SKIPa-interacting protein 17 description:Similar to BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3. (Os12t0613250-00)
Sequence	ATGGGTTCCATGAAGCTAAGCTCCAAGCCGGATGCATTCACAAGGCGAGGGCAAGCATGG TACTGCACAACAGGGCTTCCCAGCGATGTTCTTGTTGAGGTTGGGGAGATGTCTTTCCAC CTTCACAAGTTCCCCCTGCTTTCAAAGAGTGCCATCCTGGGAAGATTGATTGAGGAGAAT TCAGACAGCGATGAATGTGTCATCATATTGTCTGACATCCCTGGTGGCGCAAAATCATTC GAGTTAGTGGCAAGGTTCTGTTATGGGCTGAAGATAGAGCTGTCTTCAGAAAATGTCGTC TACCTACGCTGCGCTGCTGAACATCTTGAGATGACAGAAGAAACATCTGGGGATAATCTG ATTAATCAGACAGAGTCATTCTTTAACCAAGTAGTCCTCCGAAGCTGGAAAGATTCCCTG GAAGCGCTTCGGACATGTGATGGCCTTCTCCCTCATGCTGAAGACCTTCACATTGTGAAG AGATGCATCGAATCATTGGCTGGCAAAGCTAGCATCGATCCGGACCTCTTCGGCTGGCCA GTCTCGGAACATAGTACCATGCAAAGCCCCGGGGGAAGTGTCTTGTGGAATGGCATAAGC ACGGGTGCGAAGGTTAGGAACTGCAGTTCGGACTGGTGGTATGATGATGCTTCCTCCCTG AGCTTCCCTACATACAAGAGGCTTATTTCTTCCATGGAGTCAAGAGGCATCAAACAGGAG ATCATTGCGGGTTCGCTCACATACTACGCCAAGAAGTTTCTCCCAGGGTTGAATAGGCGT CAAAGCACCGGACCAATGCCCCTGCCGGCTGCTACCCTGTCTGATGAAGAACAGAGGCGC CTGCTTGAAGAGATTGATAGGATGTTGCCACTTCAGAGAGGTTTAATATCCACAAATGTT TTGCTCTGGCTGCTCCGGACCGCCATGATCCTGAAAGTCGACCGCGCTTGCATTTCAAAC TTGGAGAAAAGGGTCGGGATGCAGCTGGACGAAGCCACATTGGAGGATCTACTGCTGCCA AACTTCTCATACACCATGGACACGCTCTACAACGTCGAGTGCGTTCACAGGATTCTCGAC CACTTCTTGGCAATGGATCAGACCATGGGTGGCGGTGGCGCCTCCCCATGCTTGGATGAT GTGATGGCATCTCCTTCGTTGGCACCGATCACCGCTGTCGCGAAGCTGATTGATGGCTAC CTTGCAGAGATTGCACCTGATATCAACCTAAAGCCACTGAAATTCCAGTCTCTGGCAGCT GTTTTACCTGAATATGCTCGGCCACTGGATGACGGTCTTTACCGCGCCATTGATGTATAC CTGAAGTCGCATCCGACGCTGCCTGAAGCTGAACGGGAGCAGCTATGCCGGCTGATCGAC TGCCAGAAGCTGTCGCTGGAGGCGTGCACCCACGCCGCGCAGAACGAGCGGCTGCCGCTG CGGGTGGTGGTGCAGGTGCTCTTCTTCGAGCAGCTGCAGCTGAGGACGTCGGTGGCCGGC TGCCTGCTCGTCTCCGACAACCTGGAGGCCTCGTCGAGGACGCTCCGCGGCGGCGGCGCG GTGGCGGCGTCCGGCGAGGCCGGGTGCTGGGCCACGGCCGCCGTGAGGGAGAACCAGGCG CTCCGGGTCGGCATGGACAGCATGCGGCTGCGGCTGATGGAGCTCGAGCGGGAGTGCTCC GACATGCGCCAGGACATCCGCAAGCTCGGCCGCGGCCGCCGCCGCCTCCGTGGCGGTGGT GGCATCGTCGCCGGTGGCAAGGACGGCGGCGGGTGGGCAGCGCGGGTGCAGCGGATGCTG ACGCCGAGGATGATGAAGCTGCAGATGTGCAGCGCGCAGCATGACGCCGCCGAGCAGCAG CGGATGAACAATGAGCACAAGAAGGTGGAGAAGGTGGCCAAGAACAAGAAGCAGCTGTCC ATGGACGACGGTGACGACGAGGAGGAGGCCTGA

Peptide Sequence

PEP ID	Os12t0613250-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:25977889:25982348:-1 gene:Os12g0613250 transcript:Os12t0613250-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 17, SKIPa-interacting protein 17, SKIPa-interacting protein 17 description:Similar to BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3. (Os12t0613250-00)
Sequence	MGSMKLSSKPDAFTRRGQAWYCTTGLPSDVLVEVGEMSFHLHKFPLLSKSAILGRLIEEN SDSDECVIILSDIPGGAKSFELVARFCYGLKIELSSENVVYLRCAAEHLEMTEETSGDNL INQTESFFNQVVLRSWKDSLEALRTCDGLLPHAEDLHIVKRCIESLAGKASIDPDLFGWP VSEHSTMQSPGGSVLWNGISTGAKVRNCSSDWWYDDASSLSFPTYKRLISSMESRGIKQE IIAGSLTYYAKKFLPGLNRRQSTGPMPLPAATLSDEEQRRLLEEIDRMLPLQRGLISTNV LLWLLRTAMILKVDRACISNLEKRVGMQLDEATLEDLLLPNFSYTMDTLYNVECVHRILD HFLAMDQTMGGGGASPCLDDVMASPSLAPITAVAKLIDGYLAEIAPDINLKPLKFQSLAA VLPEYARPLDDGLYRAIDVYLKSHPTLPEAEREQLCRLIDCQKLSLEACTHAAQNERLPL RVVVQVLFFEQLQLRTSVAGCLLVSDNLEASSRTLRGGGAVAASGEAGCWATAAVRENQA LRVGMDSMRLRLMELERECSDMRQDIRKLGRGRRRLRGGGGIVAGGKDGGGWAARVQRML TPRMMKLQMCSAQHDAAEQQRMNNEHKKVEKVAKNKKQLSMDDGDDEEEA

Transcript Sequence

Transcript ID	Os12t0613250-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25977889:25982348:-1 gene:Os12g0613250 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 17, SKIPa-interacting protein 17, SKIPa-interacting protein 17 description:Similar to BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3. (Os12t0613250-00)
Sequence	CTCTTCCTCTTCTCCTCTCCGGAGAGAGAGAGAGAGAGAGAGGCAGCCTAGATCCATTTG CAGGATGGGTTCCATGAAGCTAAGCTCCAAGCCGGATGCATTCACAAGGCGAGGGCAAGC ATGGTACTGCACAACAGGGCTTCCCAGCGATGTTCTTGTTGAGGTTGGGGAGATGTCTTT CCACCTTCACAAGTTCCCCCTGCTTTCAAAGAGTGCCATCCTGGGAAGATTGATTGAGGA GAATTCAGACAGCGATGAATGTGTCATCATATTGTCTGACATCCCTGGTGGCGCAAAATC ATTCGAGTTAGTGGCAAGGTTCTGTTATGGGCTGAAGATAGAGCTGTCTTCAGAAAATGT CGTCTACCTACGCTGCGCTGCTGAACATCTTGAGATGACAGAAGAAACATCTGGGGATAA TCTGATTAATCAGACAGAGTCATTCTTTAACCAAGTAGTCCTCCGAAGCTGGAAAGATTC CCTGGAAGCGCTTCGGACATGTGATGGCCTTCTCCCTCATGCTGAAGACCTTCACATTGT GAAGAGATGCATCGAATCATTGGCTGGCAAAGCTAGCATCGATCCGGACCTCTTCGGCTG GCCAGTCTCGGAACATAGTACCATGCAAAGCCCCGGGGGAAGTGTCTTGTGGAATGGCAT AAGCACGGGTGCGAAGGTTAGGAACTGCAGTTCGGACTGGTGGTATGATGATGCTTCCTC CCTGAGCTTCCCTACATACAAGAGGCTTATTTCTTCCATGGAGTCAAGAGGCATCAAACA GGAGATCATTGCGGGTTCGCTCACATACTACGCCAAGAAGTTTCTCCCAGGGTTGAATAG GCGTCAAAGCACCGGACCAATGCCCCTGCCGGCTGCTACCCTGTCTGATGAAGAACAGAG GCGCCTGCTTGAAGAGATTGATAGGATGTTGCCACTTCAGAGAGGTTTAATATCCACAAA TGTTTTGCTCTGGCTGCTCCGGACCGCCATGATCCTGAAAGTCGACCGCGCTTGCATTTC AAACTTGGAGAAAAGGGTCGGGATGCAGCTGGACGAAGCCACATTGGAGGATCTACTGCT GCCAAACTTCTCATACACCATGGACACGCTCTACAACGTCGAGTGCGTTCACAGGATTCT CGACCACTTCTTGGCAATGGATCAGACCATGGGTGGCGGTGGCGCCTCCCCATGCTTGGA TGATGTGATGGCATCTCCTTCGTTGGCACCGATCACCGCTGTCGCGAAGCTGATTGATGG CTACCTTGCAGAGATTGCACCTGATATCAACCTAAAGCCACTGAAATTCCAGTCTCTGGC AGCTGTTTTACCTGAATATGCTCGGCCACTGGATGACGGTCTTTACCGCGCCATTGATGT ATACCTGAAGTCGCATCCGACGCTGCCTGAAGCTGAACGGGAGCAGCTATGCCGGCTGAT CGACTGCCAGAAGCTGTCGCTGGAGGCGTGCACCCACGCCGCGCAGAACGAGCGGCTGCC GCTGCGGGTGGTGGTGCAGGTGCTCTTCTTCGAGCAGCTGCAGCTGAGGACGTCGGTGGC CGGCTGCCTGCTCGTCTCCGACAACCTGGAGGCCTCGTCGAGGACGCTCCGCGGCGGCGG CGCGGTGGCGGCGTCCGGCGAGGCCGGGTGCTGGGCCACGGCCGCCGTGAGGGAGAACCA GGCGCTCCGGGTCGGCATGGACAGCATGCGGCTGCGGCTGATGGAGCTCGAGCGGGAGTG CTCCGACATGCGCCAGGACATCCGCAAGCTCGGCCGCGGCCGCCGCCGCCTCCGTGGCGG TGGTGGCATCGTCGCCGGTGGCAAGGACGGCGGCGGGTGGGCAGCGCGGGTGCAGCGGAT GCTGACGCCGAGGATGATGAAGCTGCAGATGTGCAGCGCGCAGCATGACGCCGCCGAGCA GCAGCGGATGAACAATGAGCACAAGAAGGTGGAGAAGGTGGCCAAGAACAAGAAGCAGCT GTCCATGGACGACGGTGACGACGAGGAGGAGGCCTGA