Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0613000-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:25953474:25957331:-1 gene:Os12g0613000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to NF-YA subunit. (Os12t0613000-01)
Sequence	ATGACGTCTGTAGTTCATGATGTTTCAGGCAACCATGGAGCTGATGAGCGGCAAAAACAG CAAAGGCAAGGTGAACCTGAGGACCAGCAAGAAGCCTCAGTTACTAGTACAGATAGCCAT ACAATGGTAGCAACACCTTCAACAGATTATGCGACACCCTATGCCCATCACGATATGGCC CATGCAATGGGCCAAATTGCTTACGCAAATATTGATCCATATTACGGAAGCCTTTATGCA GCTTATGGTGGACAGCCTATGATGCATCCACCATTGGTCGGGATGCATCCAGCTGGACTA CCACTGCCTACCGATGCAATTGAAGAGCCTGTCTATGTTAATGCAAAACAGTACAATGCC ATATTAAGGCGTCGACAATCTCGAGCCAAAGCTGAGTCTGAAAAGAAGCTTGTCAAGGGC CGTAAGCCATATCTCCATGAGTCACGGCATCAACATGCCCTGAAAAGGGCTAGGGGAGCT GGAGGCCGATTTCTTAATTCAAAATCGGATGACAAGGAAGAGCATTCTGATTCCAGTTCC AGAGATAAACAGGATGGAGTTGCACCCCGTGATAGTGGCCAACCGTCTACCTCTCCGTCT TCAAAGGGTGCATCATCAGCTAAACAAAATAAGAAGTCAAAAACCAGTAACTAA

Peptide Sequence

PEP ID	Os12t0613000-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:25953474:25957331:-1 gene:Os12g0613000 transcript:Os12t0613000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to NF-YA subunit. (Os12t0613000-01)
Sequence	MTSVVHDVSGNHGADERQKQQRQGEPEDQQEASVTSTDSHTMVATPSTDYATPYAHHDMA HAMGQIAYANIDPYYGSLYAAYGGQPMMHPPLVGMHPAGLPLPTDAIEEPVYVNAKQYNA ILRRRQSRAKAESEKKLVKGRKPYLHESRHQHALKRARGAGGRFLNSKSDDKEEHSDSSS RDKQDGVAPRDSGQPSTSPSSKGASSAKQNKKSKTSN

Transcript Sequence

Transcript ID	Os12t0613000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25953474:25957331:-1 gene:Os12g0613000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to NF-YA subunit. (Os12t0613000-01)
Sequence	CTTCTCATCTCATCTCCCTCTCCTCTCCTCTCGCCGTCGCCGTCGCCGTCGCCGCCGCTC GCCGCCGGCGGGGATAGAGTTCGCCGGGATCGCCTCGCCGGGAGAGTTCCCTCACCATCC CGCACCTCCGCTCGCCTGGCCTCTTCCTCCCGGAAGTGTGGTGTGCTGCAAGCTCCTGTC TCTCCTACAAGGTTTCAAAACCAAAATATGCCTGAAGCACACGGAAAGCTGGGGTGATTA ACGTCTGTTTCTTTTGACTACAATCATCCTGATTCTGCTTCTGTCTGCAAAAACAACCAA GCCATGACGTCTGTAGTTCATGATGTTTCAGGCAACCATGGAGCTGATGAGCGGCAAAAA CAGCAAAGGCAAGGTGAACCTGAGGACCAGCAAGAAGCCTCAGTTACTAGTACAGATAGC CATACAATGGTAGCAACACCTTCAACAGATTATGCGACACCCTATGCCCATCACGATATG GCCCATGCAATGGGCCAAATTGCTTACGCAAATATTGATCCATATTACGGAAGCCTTTAT GCAGCTTATGGTGGACAGCCTATGATGCATCCACCATTGGTCGGGATGCATCCAGCTGGA CTACCACTGCCTACCGATGCAATTGAAGAGCCTGTCTATGTTAATGCAAAACAGTACAAT GCCATATTAAGGCGTCGACAATCTCGAGCCAAAGCTGAGTCTGAAAAGAAGCTTGTCAAG GGCCGTAAGCCATATCTCCATGAGTCACGGCATCAACATGCCCTGAAAAGGGCTAGGGGA GCTGGAGGCCGATTTCTTAATTCAAAATCGGATGACAAGGAAGAGCATTCTGATTCCAGT TCCAGAGATAAACAGGATGGAGTTGCACCCCGTGATAGTGGCCAACCGTCTACCTCTCCG TCTTCAAAGGGTGCATCATCAGCTAAACAAAATAAGAAGTCAAAAACCAGTAACTAAACG GGATTTAAGCACCTGGTGTGAAACATGGAAACAGTTTTGTACAGTACATGCTAGTGATCG ACAAAGAATGGTGTCATTGGGTGTTGTAGGATAATGCTCCATAGAGAATATATAGACAGG GCAACAGATTTTGCAGCCTTTGGTTCGGTCTGCTCAGTTTCTTTACCTTCTTGTACAATG AGTAGTTTTCGTCAGTTGTGCTTTGTCATGGGGATAGCTGAATTTCTTCAGGAAGTCTTG TAGTTTTAAAGAGTTCATTAGCTTGCCAATTGTTTGCTTTGGATTGGATTGGTCTCTTAC TGCCTTTGCATCATCATCTGCAGTGCACAGAATAAAACATTGGCTATGTGT