Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0612700-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:25920652:25927349:-1 gene:Os12g0612700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 33 description:Class III homeodomain-leucine zipper (HD-Zip III) protein, Age-dependent leaf senescence (Os12t0612700-01)
Sequence	ATGGCAGCGGCGGCGGTGGGGGGAAGGGGGGAGAGGCTGTCGTCCTCCTCCCCGACGGCG GCGGCGCCGCAGGTGGACGCCGGGAAGTACGTCCGGTACACGCCCGAGCAGGTGGAGGCG CTGGAGCGGGTGTACACCGAGTGCCCCAAGCCCAGCTCACTCCGCCGCCAGCAGCTCATC CGGGAGTGCCCCATCCTCAGCAACATCGAGCCCAAGCAGATCAAGGTCTGGTTTCAGAAT CGCAGATGCCGGGAGAAGCAGCGCAAGGAGGCCTCCCGGCTGCAAACTGTGAACCGGAAG CTGAATGCGATGAACAAGCTGTTGATGGAGGAAAATGACCGGCTGCAGAAGCAGGTGTCC CGTCTCGTCTACGAGAACGGCTACATGCGGACTCAACTGCACAATCCTTCTGCAGCCACC ACAGATACAAGCTGTGAGTCTGTGGTGACAAGTGGTCAGCACCATCAACAGCAAAACCCA GCAGTTCTGCATCCGCAAAGGGATGCGAACAACCCAGCAGGTCTTCTCGCTATTGCTGAG GAGACCTTGGCAGAGTTCATGTCGAAGGCGACAGGAACTGCTGTCGAATGGGTGCAAATG GTTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCATCGCTGTTTCGCACAATTGCAGT GGCGTAGCAGCACGAGCTTGCGGCCTGGTGAGCCTTGAGCCCACAAAGGTTGCAGAGATC CTCAAGGATCGCCCCTCTTGGTACCGTGATTGCCGATGCGTAGATATCATCCATGTTATC CCTACGGGTAACGGCGGAACCATTGAGCTAATCTACATGCAGACATATGCACCGACAACT TTGGCGGCACCACGCGACTTTTGGACTCTCCGCTACACAAGTGGACTTGAAGATGGGAGT CTTGTGATCTGTGAAAGGTCATTGACTCAGTCCACTGGTGGCCCATCTGGGCCTAACACT CCGAATTTTATCAGAGCCGAGGTACTTCCCAGTGGTTATCTGATTCGACCATGTGAGGGA GGTGGCTCCATGATTTACATTGTTGATCATGTTGATTTGGATGCTTGGAGTGTGCCTGAG GTTCTTCGACCGCTCTATGAATCTCCAAAGATCCTTGCACAGAAGATGACCATTGCAGCA TTGCGACACATTAGGCAAATTGCGCATGAGTCAAGCGGTGAAATCCCCTACGGTGCTGGT CGCCAGCCTGCTGTTTTCAGGACCTTCAGTCAAAGGCTCAGCAGAGGTTTCAATGATGCT GTTAGTGGATTTCCAGATGATGGGTGGTCTTTGTTGAGCAGTGATGGTAGTGAGGACATT ACAATTTCAGTAAACTCGTCTCCAAACAAGCTTGTTGGATCCCATGTCAGCCCGAACCCT CTGTTTTCTACTGTTGGAGGTGGCATCTTGTGCGCAAAGGCATCAATGCTACTTCAGAAT GTACCTCCTGCTCTACTTGTGCGATTTCTGAGGGAGCATCGTTCTGAATGGGCTGATCCT GGTGTTGATGCTTATTCTGCTGCTTCTTTGCGAGCCAGCCCATATGCAGTTCCAGGCTTA AGGACCAGCGGGTTTATGGGCAGTCAGGTTATACTACCCCTCGCTCATACCTTAGAGCAT GAAGAGTTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTGCTT CTATCACGGGATATGTACCTTCTACAGCTTTGCAGCGGGGTTGATGAGAATGCTACTAGT GCATCTGCACAGCTTGTCTTTGCTCCTATTGACGAATCTTTTGCTGATGATGCACCACTT TTACCCTCAGGATTCCGTGTGATACCACTAGATACAAAAATGGATGGGCCATCTGCAACA CGCACGCTCGACCTTGCATCCGCCCTTGAGGTTGGACCAGGTGGAGCTTCGCGTGCTTCA GTTGAAGCATCTGGCACATGTAACAGATCAGTCCTGACCATTGCTTTCCAATTCTCATAC GAGAACCACCTTCGTGAGAGCGTGGCGGCAATGGCTAGGAGTTATGTCAGAGCTGTGATG GCATCCGTGCAGAGGGTGGCTGTGGCAATAGCTCCTTCTCGACTTGGACCCCAGATCGGA ATGAAGCACCCTCCAGCCTCTCCTGAGGCGCTTACACTTGCTAGCTGGATTGGTAGGAGC TATAGGGCTCACACCGGAGCAGATATCCGTTGGTCTGATACCGAAGATGCCGATTCTCCC CTGGCGCTCCTGTGGAAGCACAGCGACGCAATACTGTGCTGTTCTCTGAAGCCTGCTCCT ATGTTCACCTTCGCCAACAATGCCGGCCTCGACATCCTTGAGACGACGCTGGTCAACCTC CAGGACATCTCGCTCGAGATGATCCTGGATGACGAGGGCCGGAAGGCGCTGTGCTCGGAG TTCCCCAAGATCATGCAGCAGGGTTTCACCTATCTCCCTGGAGGCGTCTGCAAGTCGAGC ATGGGGCGGCAGGCATCGTATGAGCAGGCGGTGGCGTGGAAGGTTCTTAGCGACGACGAC GCGCCGCACTGCCTCGCCTTCATGCTCGTCAACTGGACCTTCATGTGA

Peptide Sequence

PEP ID	Os12t0612700-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:25920652:25927349:-1 gene:Os12g0612700 transcript:Os12t0612700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 33 description:Class III homeodomain-leucine zipper (HD-Zip III) protein, Age-dependent leaf senescence (Os12t0612700-01)
Sequence	MAAAAVGGRGERLSSSSPTAAAPQVDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLI RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVS RLVYENGYMRTQLHNPSAATTDTSCESVVTSGQHHQQQNPAVLHPQRDANNPAGLLAIAE ETLAEFMSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEI LKDRPSWYRDCRCVDIIHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGS LVICERSLTQSTGGPSGPNTPNFIRAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPE VLRPLYESPKILAQKMTIAALRHIRQIAHESSGEIPYGAGRQPAVFRTFSQRLSRGFNDA VSGFPDDGWSLLSSDGSEDITISVNSSPNKLVGSHVSPNPLFSTVGGGILCAKASMLLQN VPPALLVRFLREHRSEWADPGVDAYSAASLRASPYAVPGLRTSGFMGSQVILPLAHTLEH EEFLEVIRLEGHGFSHDEVLLSRDMYLLQLCSGVDENATSASAQLVFAPIDESFADDAPL LPSGFRVIPLDTKMDGPSATRTLDLASALEVGPGGASRASVEASGTCNRSVLTIAFQFSY ENHLRESVAAMARSYVRAVMASVQRVAVAIAPSRLGPQIGMKHPPASPEALTLASWIGRS YRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLKPAPMFTFANNAGLDILETTLVNL QDISLEMILDDEGRKALCSEFPKIMQQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDD APHCLAFMLVNWTFM

Transcript Sequence

Transcript ID	Os12t0612700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25920652:25927349:-1 gene:Os12g0612700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 33 description:Class III homeodomain-leucine zipper (HD-Zip III) protein, Age-dependent leaf senescence (Os12t0612700-01)
Sequence	GAAGACCAGAGAGAAGACGAGAGGCGATCGCAGTGGAGTGGAGTGAAGTACTAGCAGTAT TAAAACCAGCAGCAAGCGAGAGAGAGGCCACCAACCACTTCCTCCTCCAAGAAACCACCC CCACCACGAGCACGAGCACGAGCAACCATGGCGGTGGCAGAGGGAGCTGCGACTGCGAGC TACGGGCCATGACTGCGGCGAGTTCTTGCTGGGTTGTTGTTGTACAAGCAGCGACGAGGA GGAGGGGAGCAGAGGAGGAGGAGGCGGAGGGATGGCAGCGGCGGCGGTGGGGGGAAGGGG GGAGAGGCTGTCGTCCTCCTCCCCGACGGCGGCGGCGCCGCAGGTGGACGCCGGGAAGTA CGTCCGGTACACGCCCGAGCAGGTGGAGGCGCTGGAGCGGGTGTACACCGAGTGCCCCAA GCCCAGCTCACTCCGCCGCCAGCAGCTCATCCGGGAGTGCCCCATCCTCAGCAACATCGA GCCCAAGCAGATCAAGGTCTGGTTTCAGAATCGCAGATGCCGGGAGAAGCAGCGCAAGGA GGCCTCCCGGCTGCAAACTGTGAACCGGAAGCTGAATGCGATGAACAAGCTGTTGATGGA GGAAAATGACCGGCTGCAGAAGCAGGTGTCCCGTCTCGTCTACGAGAACGGCTACATGCG GACTCAACTGCACAATCCTTCTGCAGCCACCACAGATACAAGCTGTGAGTCTGTGGTGAC AAGTGGTCAGCACCATCAACAGCAAAACCCAGCAGTTCTGCATCCGCAAAGGGATGCGAA CAACCCAGCAGGTCTTCTCGCTATTGCTGAGGAGACCTTGGCAGAGTTCATGTCGAAGGC GACAGGAACTGCTGTCGAATGGGTGCAAATGGTTGGGATGAAGCCTGGTCCGGATTCCAT TGGAATCATCGCTGTTTCGCACAATTGCAGTGGCGTAGCAGCACGAGCTTGCGGCCTGGT GAGCCTTGAGCCCACAAAGGTTGCAGAGATCCTCAAGGATCGCCCCTCTTGGTACCGTGA TTGCCGATGCGTAGATATCATCCATGTTATCCCTACGGGTAACGGCGGAACCATTGAGCT AATCTACATGCAGACATATGCACCGACAACTTTGGCGGCACCACGCGACTTTTGGACTCT CCGCTACACAAGTGGACTTGAAGATGGGAGTCTTGTGATCTGTGAAAGGTCATTGACTCA GTCCACTGGTGGCCCATCTGGGCCTAACACTCCGAATTTTATCAGAGCCGAGGTACTTCC CAGTGGTTATCTGATTCGACCATGTGAGGGAGGTGGCTCCATGATTTACATTGTTGATCA TGTTGATTTGGATGCTTGGAGTGTGCCTGAGGTTCTTCGACCGCTCTATGAATCTCCAAA GATCCTTGCACAGAAGATGACCATTGCAGCATTGCGACACATTAGGCAAATTGCGCATGA GTCAAGCGGTGAAATCCCCTACGGTGCTGGTCGCCAGCCTGCTGTTTTCAGGACCTTCAG TCAAAGGCTCAGCAGAGGTTTCAATGATGCTGTTAGTGGATTTCCAGATGATGGGTGGTC TTTGTTGAGCAGTGATGGTAGTGAGGACATTACAATTTCAGTAAACTCGTCTCCAAACAA GCTTGTTGGATCCCATGTCAGCCCGAACCCTCTGTTTTCTACTGTTGGAGGTGGCATCTT GTGCGCAAAGGCATCAATGCTACTTCAGAATGTACCTCCTGCTCTACTTGTGCGATTTCT GAGGGAGCATCGTTCTGAATGGGCTGATCCTGGTGTTGATGCTTATTCTGCTGCTTCTTT GCGAGCCAGCCCATATGCAGTTCCAGGCTTAAGGACCAGCGGGTTTATGGGCAGTCAGGT TATACTACCCCTCGCTCATACCTTAGAGCATGAAGAGTTCTTGGAGGTTATTAGGCTCGA AGGACATGGTTTCAGCCATGATGAGGTGCTTCTATCACGGGATATGTACCTTCTACAGCT TTGCAGCGGGGTTGATGAGAATGCTACTAGTGCATCTGCACAGCTTGTCTTTGCTCCTAT TGACGAATCTTTTGCTGATGATGCACCACTTTTACCCTCAGGATTCCGTGTGATACCACT AGATACAAAAATGGATGGGCCATCTGCAACACGCACGCTCGACCTTGCATCCGCCCTTGA GGTTGGACCAGGTGGAGCTTCGCGTGCTTCAGTTGAAGCATCTGGCACATGTAACAGATC AGTCCTGACCATTGCTTTCCAATTCTCATACGAGAACCACCTTCGTGAGAGCGTGGCGGC AATGGCTAGGAGTTATGTCAGAGCTGTGATGGCATCCGTGCAGAGGGTGGCTGTGGCAAT AGCTCCTTCTCGACTTGGACCCCAGATCGGAATGAAGCACCCTCCAGCCTCTCCTGAGGC GCTTACACTTGCTAGCTGGATTGGTAGGAGCTATAGGGCTCACACCGGAGCAGATATCCG TTGGTCTGATACCGAAGATGCCGATTCTCCCCTGGCGCTCCTGTGGAAGCACAGCGACGC AATACTGTGCTGTTCTCTGAAGCCTGCTCCTATGTTCACCTTCGCCAACAATGCCGGCCT CGACATCCTTGAGACGACGCTGGTCAACCTCCAGGACATCTCGCTCGAGATGATCCTGGA TGACGAGGGCCGGAAGGCGCTGTGCTCGGAGTTCCCCAAGATCATGCAGCAGGGTTTCAC CTATCTCCCTGGAGGCGTCTGCAAGTCGAGCATGGGGCGGCAGGCATCGTATGAGCAGGC GGTGGCGTGGAAGGTTCTTAGCGACGACGACGCGCCGCACTGCCTCGCCTTCATGCTCGT CAACTGGACCTTCATGTGATCCACCATCCATGGTTTCCAGCTTCCAGCTAGTGCTTTTGC TTTTGTGCCATTGTGGCAAACTGAACAAAGACCTGAATACCACCACCGTATTGTATTAAA CATATGCGTCCATACATGCATGGTGCTTGCTTTATCCTAGCTAGTGCTAGCACCTGTGTG TATGGTCTCTCCATGTTTGAAGCTTAAAATTTTAGAACCCTGGTTTTTTTTTTTCTGCTG CTGTGTGGATGAACAAGTTTCAGGACCTATGTATCTCTATCTATCTATGCTAATGCTATG AATTGTGTGATGTGTGT