Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0612400-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:25901495:25906724:-1 gene:Os12g0612400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C83 description:Similar to S-locus protein 5 (Fragment). (Os12t0612400-01);Similar to YUP8H12R.35 protein. (Os12t0612400-02)
Sequence	TGGGTGGTGTCCCAGAAGCACATCCTGACATGGGCGCACATGGCGGCGAGCGGCGGCACC GAGAGGCTGGCCTTCCTGGTCGACCGGCATTGGCCCGCCGTGTCCCGGGCCTGCGTGAGC TCCGGCCGCCTCGCGCTCGCCGCGCTGCGGCAATGGCGCGGCTGCGCGGCGCGCGGGATC CTGGAGATGGCTAGCCTGGGCCCTGCGTCCGTGTTCGTCATCCTCTGGAGCTTCTTCGTG TGCATCACCTCGCCGGCGTGCGCCCTCTACGCGCTCCTGGGCATGGGAGCTGCTGGGGCA GTCATTCATTACATGGGCTATACGCCTGGTCTTTTCATTGTAGGATTATTTGGAATATTG ATTATGTGGATGTATGGCTATTTCTGGATTACAGGAATGCTTCTGATTGCTGGAGGCTGT ATGTGCTCTTTGAAACATGCACGATTTGTGATACCTGTGTTGGCTATGTATGCTGTTTAT TGTGTGGCTGTTCGTGTTGGATCGCTTGGTGTCTTCTTGACATTGAATCTTTCTTTCCTG ACAAATGATCTTCTGAATAAGTTGCTGCAAGGATACGAGGGAAGCACAGAAGAAAGACAG TTTGAAGAGCCAAAACATTCTGATCCTGTCATGGATGAGTTCTATCGCAGTTGTGAATTT CCCTCTGCTCCTGATAGTGAACCTGAGACTGTTTCTTCTGCAAAGCCCTTTTGCTCAACA CCCGTCCAGGATGTGTTGCATGTACAGAAAGAGGCATCTCCTAGCAAAGTAGTGAAATCG GATTCTGTTTCATTGGATGAGATGAAGAGGATCATGGATGGTTTGACCCATTATGAAGTT TTGGGTATTCCTCGGAATAGAAGTATTGATCAAAAGATTCTGAAAAAGGAGTACCACAGA ATGGTCCTGCTTGTACATCCTGATAAAAATATGGGAAATCCACTGGCCTGTGAATCATTC AAAAAGCTTCAGTCAGCTTATGAGGTACTCTCAGATTTCACAAAGAAAAACACTTACGAC GACCAACTGAGGAAAGAAGAATCACGTAAAATGACTCAGAGATCACGTGTTGTCTCTCAA CAGACTGGGGTAGAGTTTCTCTCCGAAGAGTCCAGGCGTATACAGTGCACAAAATGTGGT AATTTTCATCTGTGGATATGTACCAAGAAAAGCAAAGCAAAAGCAAGATGGTGTCAGGAT TGCTCTGATTTTCATCCAGCTAAGGATGGAGATGGATGGGTGGAAAATAAATTTTCGTCA TCCTTCAAGGAAATACCTCGAGCTTTTGTTTGTGCGGAGAGTAAGGTATTTGATGTGTCT GAATGGGCTACTTGCCAGGGCATGGAGTGCAAACCTAACACTCACGGCCCATCTTTTATG GTAAACATGGTTGGCGCAGATAGGATGTCTCAGAGATCCTACAGTTCTCGCTATCCCTTT AGTTTGAATGCTGAGATGATCCCTGAAGATGAATTTGAGCTATGGCTTCAACAAGCATTG GCATCAGGTGTCTTCTCTGACAGCCCGAAACGCAGGAAAAGCTGGAGCCCCTTCAAACTA CCTCAAAAAGGGATAAAAAGTTGGCGGCGATCCTCATAA

Peptide Sequence

PEP ID	Os12t0612400-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:25901495:25906724:-1 gene:Os12g0612400 transcript:Os12t0612400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C83 description:Similar to S-locus protein 5 (Fragment). (Os12t0612400-01);Similar to YUP8H12R.35 protein. (Os12t0612400-02)
Sequence	WVVSQKHILTWAHMAASGGTERLAFLVDRHWPAVSRACVSSGRLALAALRQWRGCAARGI LEMASLGPASVFVILWSFFVCITSPACALYALLGMGAAGAVIHYMGYTPGLFIVGLFGIL IMWMYGYFWITGMLLIAGGCMCSLKHARFVIPVLAMYAVYCVAVRVGSLGVFLTLNLSFL TNDLLNKLLQGYEGSTEERQFEEPKHSDPVMDEFYRSCEFPSAPDSEPETVSSAKPFCST PVQDVLHVQKEASPSKVVKSDSVSLDEMKRIMDGLTHYEVLGIPRNRSIDQKILKKEYHR MVLLVHPDKNMGNPLACESFKKLQSAYEVLSDFTKKNTYDDQLRKEESRKMTQRSRVVSQ QTGVEFLSEESRRIQCTKCGNFHLWICTKKSKAKARWCQDCSDFHPAKDGDGWVENKFSS SFKEIPRAFVCAESKVFDVSEWATCQGMECKPNTHGPSFMVNMVGADRMSQRSYSSRYPF SLNAEMIPEDEFELWLQQALASGVFSDSPKRRKSWSPFKLPQKGIKSWRRSS

Transcript Sequence

Transcript ID	Os12t0612400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25901495:25906724:-1 gene:Os12g0612400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C83 description:Similar to S-locus protein 5 (Fragment). (Os12t0612400-01);Similar to YUP8H12R.35 protein. (Os12t0612400-02)
Sequence	GGTGGGTGGTGTCCCAGAAGCACATCCTGACATGGGCGCACATGGCGGCGAGCGGCGGCA CCGAGAGGCTGGCCTTCCTGGTCGACCGGCATTGGCCCGCCGTGTCCCGGGCCTGCGTGA GCTCCGGCCGCCTCGCGCTCGCCGCGCTGCGGCAATGGCGCGGCTGCGCGGCGCGCGGGA TCCTGGAGATGGCTAGCCTGGGCCCTGCGTCCGTGTTCGTCATCCTCTGGAGCTTCTTCG TGTGCATCACCTCGCCGGCGTGCGCCCTCTACGCGCTCCTGGGCATGGGAGCTGCTGGGG CAGTCATTCATTACATGGGCTATACGCCTGGTCTTTTCATTGTAGGATTATTTGGAATAT TGATTATGTGGATGTATGGCTATTTCTGGATTACAGGAATGCTTCTGATTGCTGGAGGCT GTATGTGCTCTTTGAAACATGCACGATTTGTGATACCTGTGTTGGCTATGTATGCTGTTT ATTGTGTGGCTGTTCGTGTTGGATCGCTTGGTGTCTTCTTGACATTGAATCTTTCTTTCC TGACAAATGATCTTCTGAATAAGTTGCTGCAAGGATACGAGGGAAGCACAGAAGAAAGAC AGTTTGAAGAGCCAAAACATTCTGATCCTGTCATGGATGAGTTCTATCGCAGTTGTGAAT TTCCCTCTGCTCCTGATAGTGAACCTGAGACTGTTTCTTCTGCAAAGCCCTTTTGCTCAA CACCCGTCCAGGATGTGTTGCATGTACAGAAAGAGGCATCTCCTAGCAAAGTAGTGAAAT CGGATTCTGTTTCATTGGATGAGATGAAGAGGATCATGGATGGTTTGACCCATTATGAAG TTTTGGGTATTCCTCGGAATAGAAGTATTGATCAAAAGATTCTGAAAAAGGAGTACCACA GAATGGTCCTGCTTGTACATCCTGATAAAAATATGGGAAATCCACTGGCCTGTGAATCAT TCAAAAAGCTTCAGTCAGCTTATGAGGTACTCTCAGATTTCACAAAGAAAAACACTTACG ACGACCAACTGAGGAAAGAAGAATCACGTAAAATGACTCAGAGATCACGTGTTGTCTCTC AACAGACTGGGGTAGAGTTTCTCTCCGAAGAGTCCAGGCGTATACAGTGCACAAAATGTG GTAATTTTCATCTGTGGATATGTACCAAGAAAAGCAAAGCAAAAGCAAGATGGTGTCAGG ATTGCTCTGATTTTCATCCAGCTAAGGATGGAGATGGATGGGTGGAAAATAAATTTTCGT CATCCTTCAAGGAAATACCTCGAGCTTTTGTTTGTGCGGAGAGTAAGGTATTTGATGTGT CTGAATGGGCTACTTGCCAGGGCATGGAGTGCAAACCTAACACTCACGGCCCATCTTTTA TGGTAAACATGGTTGGCGCAGATAGGATGTCTCAGAGATCCTACAGTTCTCGCTATCCCT TTAGTTTGAATGCTGAGATGATCCCTGAAGATGAATTTGAGCTATGGCTTCAACAAGCAT TGGCATCAGGTGTCTTCTCTGACAGCCCGAAACGCAGGAAAAGCTGGAGCCCCTTCAAAC TACCTCAAAAAGGGATAAAAAGTTGGCGGCGATCCTCATAAGGGCATAGCATTGAACAGC ATGGATCTCACCTGAGTACAACACTGAAAAAGGCTATACTCTTTGTGAATGTAAATAGAC TGACCAACAATTTGCCTGGATGAGCAACTAATTTTGTCCAAAAAGAGACTGAAACAAGGG GGGTAAAAGGAACAAACGCTTAAGACATGACTGCAATAAATCTGACTGTTGAAATTAGTG TTCTCTGCAATGAGATCCCGCGAGTTTTATCCGAAAAGGTCAGACACTGGGATGGTGTGT CATTCATCAGTTCATCCTAAGCTCGGAAGGGTATCTCTGTAGCATGTTAACTTCAGTAGT TTTAGGGGATCGGCATCTGAGAGAATTTCAAAACTTCATACCTGGTTGCCAGCATAAGTT CTGCAGGTGTTGAAAAGTTGTTGATCAGAGTAGCAATTTAAGGTCTGATGTTTCTGGGGA ACAGTAGGAGAGAAAAAAATGACAAAAAAAAGAGAGAGTAGGTTGTAAATACATGAAAAG TTTTCATCAGAAATTAGTGTTGTAACATTGTACACTGTGATTACATCCTGTGCAATACTC CCATAATTCAGATCTGTGTTGTAATACACTACATACATCCTACAATTTTCTGGTGATAAT AGAGATCTAATTCTCACC