Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0612300-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:25894325:25898041:-1 gene:Os12g0612300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0612300-01)
Sequence	ATGGAGGCGGCCGAATCCTTGGAGTATGAGCTGCAGAAGGAGGTCTCCAACATCATGATC CAGAGCTACATTACTAGCATGCGTCGAGAGTTCGAGACAAAGTTATGGGAGAATCAGAAC TGCATTAGTACCTTGAACAAAAACTGGAAGGAAAAGATATCTAAGATTGCCGCACTGCGA GATGAACTCAGTACTATTTACAGTGTTGTATCAGCTTCAGAATCTGGTGTGTTTTCTTCT CATGGTAGTCACGAAAAGGTCGAAGAGCTCAACTTTTTGAAGATGAAGGATGATAACGAG TCATCAATCACAGAGAGAACTACAGATTCAGGTGAGCTCATGTTTGATATCCCGGACTTC TCACTCTTAAAGCACATGCCAAGTGAAGAAGTCACAAATTTTCTAAAATCAGAATGGCTG AAGTTGCGAAGACAGCACGAGTCTGAATTGCATGAGAAAACAGAAGAGTTGTTTAGGCTA AAAAGGGAATTTGCGAAAGATATAGCTTTGTTGCCTTCTAGGAAAGAGAGAGAACTTGAA ATCATCAAATCAAAGTTGCTTCAAAGCATTTCAAAATTGGATGAAATCACCTTGAGAGAA GATAACCCTTATTGTGATAATTATGATGATGCCGAGGTTTGCGGATTTGAGGACAGAATC GGCTCTTTACTTCATGAAAATGAACAACTACAAGGTTTGCTAGCTGACAAAAAAATGGTG GCTAAACATCTGTCTTTACAAGTATTAGATGCAGAGAGGAAAATGGCACAGCACTCGTTG TCCGAGTTAAAACTTGTGAAACAAGTTGAGAAGCTTAGCCATGAACTTGAAGATTTAAAG ATTGAGAGCCACATTAAAGATTTATTGGAGCTGTCGACATTAAGAGAAGTTTTTGATAAT TATGAGAATCATATTGATGATGCTAATCAGGAGGAGACCTTCCTCAGAGAGTTGCTTATA GAAAAAGAAGAGCAGTTGAGTATTATGTATGAAGACAGACAGAAGCTAAAGTATGAAAAC AATCAACTTGTAGCAATTGCAGGATCAACATTAATGCAGCACCATGAGCAAGTCAACTTG GTTAATGACCTTACCAATTTTAGGGAGAAGGTGTGCGAGCAAGAGTTGTTGATCTTAGAG TCCAAGAGTGAGTCTAATTCAATGAAGAGTAGCTTGTATGAGGCTTTGCAGCAAATTAAT GTATGCAAGCAAGAGATACATGGTCTGACTGACAACTTAACTGCCATGTCTATTGCTTTG GAGGAAGCCAAAGAACAGAATGCCTCACTTGATGCCACCATCCAGGAAATGAAGAAAACA TCGGCGCCAAGCATTAACAGTCATAAGGGACAAGCAGGGCACCTAGAATATGCCCTTGTT AGTATGGAGAAGTTATCTAAATCATACAGCGATTTTGAAAGCAGATTGGCTCAAAGTATG AAGAGAAATGAAATTAGGTTGACTAATATAATTTGCCAGTTTAACCCACTGGTGCAGCAA GTTGCTGTATTAAAGAAAAAAGAATTCTGGTATAAACAGATACTCGAGATTAAATGCTCT AATCTCCAGAAAGCAGAAGCTGAGGTTGATATACTTGGGGATGAAGTTGATGCTCTTCTT AGTATTCTTGGGAAGATCTACATAGCACTTGATCATTATTCTCCTGTATTGAAGCATTAT CCTGGGGTTACAGAGATTTTGAATCTGGTTCAGAAAGCATTGAAAGGAGAAAGTATTTAG

Peptide Sequence

PEP ID	Os12t0612300-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:25894325:25898041:-1 gene:Os12g0612300 transcript:Os12t0612300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0612300-01)
Sequence	MEAAESLEYELQKEVSNIMIQSYITSMRREFETKLWENQNCISTLNKNWKEKISKIAALR DELSTIYSVVSASESGVFSSHGSHEKVEELNFLKMKDDNESSITERTTDSGELMFDIPDF SLLKHMPSEEVTNFLKSEWLKLRRQHESELHEKTEELFRLKREFAKDIALLPSRKERELE IIKSKLLQSISKLDEITLREDNPYCDNYDDAEVCGFEDRIGSLLHENEQLQGLLADKKMV AKHLSLQVLDAERKMAQHSLSELKLVKQVEKLSHELEDLKIESHIKDLLELSTLREVFDN YENHIDDANQEETFLRELLIEKEEQLSIMYEDRQKLKYENNQLVAIAGSTLMQHHEQVNL VNDLTNFREKVCEQELLILESKSESNSMKSSLYEALQQINVCKQEIHGLTDNLTAMSIAL EEAKEQNASLDATIQEMKKTSAPSINSHKGQAGHLEYALVSMEKLSKSYSDFESRLAQSM KRNEIRLTNIICQFNPLVQQVAVLKKKEFWYKQILEIKCSNLQKAEAEVDILGDEVDALL SILGKIYIALDHYSPVLKHYPGVTEILNLVQKALKGESI

Transcript Sequence

Transcript ID	Os12t0612300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25894325:25898041:-1 gene:Os12g0612300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0612300-01)
Sequence	GCCTTTAGTGGAAAAAGCTGCTCCTTTTTTCGCTTCTTCCTCCGCTCCCATTTCAATTTC GTGCGTGTGGCTTTCTCCTCTCCGCGTTTTGGTTTCCCGCGCGCGGAGGAGGGAAAGATT TTGCCGTGTTCTTGCCGGCGGCGAGCCGCCATGGAGGCGGCCGAATCCTTGGAGTATGAG CTGCAGAAGGAGGTCTCCAACATCATGATCCAGAGCTACATTACTAGCATGCGTCGAGAG TTCGAGACAAAGTTATGGGAGAATCAGAACTGCATTAGTACCTTGAACAAAAACTGGAAG GAAAAGATATCTAAGATTGCCGCACTGCGAGATGAACTCAGTACTATTTACAGTGTTGTA TCAGCTTCAGAATCTGGTGTGTTTTCTTCTCATGGTAGTCACGAAAAGGTCGAAGAGCTC AACTTTTTGAAGATGAAGGATGATAACGAGTCATCAATCACAGAGAGAACTACAGATTCA GGTGAGCTCATGTTTGATATCCCGGACTTCTCACTCTTAAAGCACATGCCAAGTGAAGAA GTCACAAATTTTCTAAAATCAGAATGGCTGAAGTTGCGAAGACAGCACGAGTCTGAATTG CATGAGAAAACAGAAGAGTTGTTTAGGCTAAAAAGGGAATTTGCGAAAGATATAGCTTTG TTGCCTTCTAGGAAAGAGAGAGAACTTGAAATCATCAAATCAAAGTTGCTTCAAAGCATT TCAAAATTGGATGAAATCACCTTGAGAGAAGATAACCCTTATTGTGATAATTATGATGAT GCCGAGGTTTGCGGATTTGAGGACAGAATCGGCTCTTTACTTCATGAAAATGAACAACTA CAAGGTTTGCTAGCTGACAAAAAAATGGTGGCTAAACATCTGTCTTTACAAGTATTAGAT GCAGAGAGGAAAATGGCACAGCACTCGTTGTCCGAGTTAAAACTTGTGAAACAAGTTGAG AAGCTTAGCCATGAACTTGAAGATTTAAAGATTGAGAGCCACATTAAAGATTTATTGGAG CTGTCGACATTAAGAGAAGTTTTTGATAATTATGAGAATCATATTGATGATGCTAATCAG GAGGAGACCTTCCTCAGAGAGTTGCTTATAGAAAAAGAAGAGCAGTTGAGTATTATGTAT GAAGACAGACAGAAGCTAAAGTATGAAAACAATCAACTTGTAGCAATTGCAGGATCAACA TTAATGCAGCACCATGAGCAAGTCAACTTGGTTAATGACCTTACCAATTTTAGGGAGAAG GTGTGCGAGCAAGAGTTGTTGATCTTAGAGTCCAAGAGTGAGTCTAATTCAATGAAGAGT AGCTTGTATGAGGCTTTGCAGCAAATTAATGTATGCAAGCAAGAGATACATGGTCTGACT GACAACTTAACTGCCATGTCTATTGCTTTGGAGGAAGCCAAAGAACAGAATGCCTCACTT GATGCCACCATCCAGGAAATGAAGAAAACATCGGCGCCAAGCATTAACAGTCATAAGGGA CAAGCAGGGCACCTAGAATATGCCCTTGTTAGTATGGAGAAGTTATCTAAATCATACAGC GATTTTGAAAGCAGATTGGCTCAAAGTATGAAGAGAAATGAAATTAGGTTGACTAATATA ATTTGCCAGTTTAACCCACTGGTGCAGCAAGTTGCTGTATTAAAGAAAAAAGAATTCTGG TATAAACAGATACTCGAGATTAAATGCTCTAATCTCCAGAAAGCAGAAGCTGAGGTTGAT ATACTTGGGGATGAAGTTGATGCTCTTCTTAGTATTCTTGGGAAGATCTACATAGCACTT GATCATTATTCTCCTGTATTGAAGCATTATCCTGGGGTTACAGAGATTTTGAATCTGGTT CAGAAAGCATTGAAAGGAGAAAGTATTTAGTAGGATCAGGAAAAACCTTAACACTATTCA TGAAAAGGCTTGACATGGATAGAATTATGACTGAGATTTTTCAATACTTCAGTTACCTGA TTGCCGTAGGCAAATTTTTTTTGCATTGTCTCACAGGGAAGAAAGATTAAGATCTTAACA CACAAAGGCAAAGCATAGTAAACTAGCTAGCTACCATTGTTCCATTGATAGGGTTACCAA CCGCATCTGTTGATTTATATGATTGTATCAGTGTTCAGTTAGTGGTGTTGTGAGTACAGT AGTACAGGCTTATAGGGTCTATTTGTATTGGTTGTAGTTTCAGGTTTCACTGTGAGTAGT TTACTTGTCTGCATGCAACAAAGTGCAGCTTGCTATAGTTATAGATGGTTTTGTCAGTGA TCTTTTTTAGATGGCTTTGTAAAGATTCTTTGTGGAATGGAAGGCAGTAGGTAGGAGTTG TAATATCAGGTGGCTAATTAATGAAATCTGTGTATTCAGTTG