Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0612100-02
CDS Infomation

cds chromosome:IRGSP-1.0:12:25888971:25892863:-1 gene:Os12g0612100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0612100-01);Conserved hypothetical protein. (Os12t0612100-02)
Sequence

ATGGTATCAACCACGGAGTTCAAAGGTGAATATTCGTTGCCAAGCAAGAAATCTCCTCTT
GATCAATTTGAAGGTGTGAAGACACATCTTTACCGTCTCGGTGCAGAACATGAAAATGGT
ACCCTCAAAAGCTTTGCATATACTGATCAGGGCAGCCCAAGTTTGCTTGATACAATCATT
CTTTCTCAGTGGGAGGATTATGCTTGGAAGGGCCATTTTGGATATGACGTAACTGCTTGC
AATCTCAAGGTTGTTGAAGGTGGATGGAGTTTTGTTGTTCAGCTGAATGATAAGTGGAAT
TCATGTGTCCTCAAGGAACATGACAAGTTCCTTGAACCTGTTGGATGCCTGAAGCCAAAC
TGTATGAATAGTTATGATGAATTGCTTCTGTGCATTGCTCAAGGTGACAAGGATATACCT
GAAGTTGTTCCTTCAACAAAACCACCAAAGGATGGACTACTGCTGATTGCAAATGCATAT
CCTGTTGAATATGGTCATATCTTCTTGGTCCCAAGCGCAACCAATCAGCTATCCTTCTTC
TGGGACAAAAGGATGTTTAGTCTGATTGCAAGGATTGCCTCTGAAGTAAATAGTGCAGCA
TTCCGGGTTTTCTTTGATAGTTGCACATCCACGATGCCAGACCACATGTTTTTTCAGGCT
TGTTACTTCGCAAACCCGTTGCCAGTGGAGTCTGCATCAACTGTTGCAATTTACCACGGC
AAAGCCACATCAGCCGTTCACCTGTATGAAATAATTGATTATCCTATGAAGGCTCTTGTG
TTAACTGGCAAGGACGTAAACACGCTTGCCAATTTTGTCAGTGAAGTATCTTTAACTCTG
CATGACAATAATACTGCGTACAGCCTGCTGATCTCCAACAATGGCACAAAGGTTTTCTTG
TTTCCACAGGTGAAGAATCTGGCTACTGGATGTTGTCTTTCTGCCTGGGAGTGCAGTGGC
TACTTCATTTATCGCGCCAAGTACGATTTTGACAGAGCTTCTGAGAATGAAATTTCCAAC
AGAATGGCGTCAGTCACACTCCAAGATGGCGCATTCGAGAACCTGAAGAATCTTTGCTGC
GCTGTTGCTGATGATCTTGTTATGTAA

Peptide Sequence

PEP ID

Os12t0612100-02
PEP Infomation

pep chromosome:IRGSP-1.0:12:25888971:25892863:-1 gene:Os12g0612100 transcript:Os12t0612100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0612100-01);Conserved hypothetical protein. (Os12t0612100-02)
Sequence

MVSTTEFKGEYSLPSKKSPLDQFEGVKTHLYRLGAEHENGTLKSFAYTDQGSPSLLDTII
LSQWEDYAWKGHFGYDVTACNLKVVEGGWSFVVQLNDKWNSCVLKEHDKFLEPVGCLKPN
CMNSYDELLLCIAQGDKDIPEVVPSTKPPKDGLLLIANAYPVEYGHIFLVPSATNQLSFF
WDKRMFSLIARIASEVNSAAFRVFFDSCTSTMPDHMFFQACYFANPLPVESASTVAIYHG
KATSAVHLYEIIDYPMKALVLTGKDVNTLANFVSEVSLTLHDNNTAYSLLISNNGTKVFL
FPQVKNLATGCCLSAWECSGYFIYRAKYDFDRASENEISNRMASVTLQDGAFENLKNLCC
AVADDLVM

Transcript Sequence

Transcript ID

Os12t0612100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:25888971:25892863:-1 gene:Os12g0612100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0612100-01);Conserved hypothetical protein. (Os12t0612100-02)
Sequence

GACGACCGCGCGCACTCTGCCGCCGCCGATTCATTCTTGATTGCCCTGTGAGGCTGCATA
AAGGCTCCATCATAATCCAAGAACTTGTTGGAGGCTCCTAAAGAATAACCAAGTTGGTCT
TGCTCAGGTGGTTAGCTGGTCCGGTAGGGCTGGCTTGAAAAGAGCAACCACGGCTCCAAA
GAAAGGATCCCGTGTTGCACTAAGAAGGGGAACACAATGTGCCCATCGCTTTCCTAAGTT
TCTTCTTGCGTCCCCTTCTTTCCACGGTGGTCGCGGTGCCCTCCCATCTGCAGGGGGGCA
TCCTTCTGATTTGACCTACCTTGCCGGTGGTGGTGCTGTTCAAGTCTGAATTAGGCTTTA
GCATTGTAGATATTTTTTTAGTAGTAGTACAGATATTAAGCATTGTAAGTATGGTATCAA
CCACGGAGTTCAAAGGTGAATATTCGTTGCCAAGCAAGAAATCTCCTCTTGATCAATTTG
AAGGTGTGAAGACACATCTTTACCGTCTCGGTGCAGAACATGAAAATGGTACCCTCAAAA
GCTTTGCATATACTGATCAGGGCAGCCCAAGTTTGCTTGATACAATCATTCTTTCTCAGT
GGGAGGATTATGCTTGGAAGGGCCATTTTGGATATGACGTAACTGCTTGCAATCTCAAGG
TTGTTGAAGGTGGATGGAGTTTTGTTGTTCAGCTGAATGATAAGTGGAATTCATGTGTCC
TCAAGGAACATGACAAGTTCCTTGAACCTGTTGGATGCCTGAAGCCAAACTGTATGAATA
GTTATGATGAATTGCTTCTGTGCATTGCTCAAGGTGACAAGGATATACCTGAAGTTGTTC
CTTCAACAAAACCACCAAAGGATGGACTACTGCTGATTGCAAATGCATATCCTGTTGAAT
ATGGTCATATCTTCTTGGTCCCAAGCGCAACCAATCAGCTATCCTTCTTCTGGGACAAAA
GGATGTTTAGTCTGATTGCAAGGATTGCCTCTGAAGTAAATAGTGCAGCATTCCGGGTTT
TCTTTGATAGTTGCACATCCACGATGCCAGACCACATGTTTTTTCAGGCTTGTTACTTCG
CAAACCCGTTGCCAGTGGAGTCTGCATCAACTGTTGCAATTTACCACGGCAAAGCCACAT
CAGCCGTTCACCTGTATGAAATAATTGATTATCCTATGAAGGCTCTTGTGTTAACTGGCA
AGGACGTAAACACGCTTGCCAATTTTGTCAGTGAAGTATCTTTAACTCTGCATGACAATA
ATACTGCGTACAGCCTGCTGATCTCCAACAATGGCACAAAGGTTTTCTTGTTTCCACAGG
TGAAGAATCTGGCTACTGGATGTTGTCTTTCTGCCTGGGAGTGCAGTGGCTACTTCATTT
ATCGCGCCAAGTACGATTTTGACAGAGCTTCTGAGAATGAAATTTCCAACAGAATGGCGT
CAGTCACACTCCAAGATGGCGCATTCGAGAACCTGAAGAATCTTTGCTGCGCTGTTGCTG
ATGATCTTGTTATGTAAAAGCTTGTGAAAGAATCAAAACCACAATAATAAAACCGTGTGA
GGGTGGTCCACTTGTTATGTCTATAGCATTTTAATGCATGGATGATGGTAATTGAACCTA
TGTCTGAACATTTGGATTGATCAATGGAGCATGCTGTTCT