Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0611200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:25828666:25832900:-1 gene:Os12g0611200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 9 description:RNA helicase. (Os12t0611200-01)
Sequence	ATGTACTCTATCCTTCGCCGCGCGGCGCCGCTCCGGCGGCGCGCCGTTTCCGCCCTGGCC GCCGCGGTTCTCCGGCGGGAGGAGGCGGCGGCGGAGGTGGTCGTGTCGCGGCGGGCGACG ATCCCGGCGGCGTGGTTCCACTCCTCCCCGGCGTGGCTGGGGTTCCGGGAGACGGGGGCC GCGGGGGCGGCGGCGAGGCCGCAGTACGCGGCGGATGAGGGGTTGTTCTACGAGGAGGAT AAGAGGGGGGCGAAGGCGGGTGGAGTTGCTGCGGGCGGCGCGGAGGAGGGGTTGGAGGTG GCCAAGCTCGGGATCTCGCCCAAGATCGTCAGCCAGCTCGCCTCGCGCGGCATAACCAAG CTGTTCCCAATCCAGAGAGCTGTCCTTGAACCAGCAATGCAAGGAAAGGACATGGTTGGT CGTGCCAAAACAGGTACAGGAAAGACTTTGGCTTTTGGAATCCCCATACTGGACGCAATT ATTCGGCACAATGAAAAGAATAGCCCTGGTAAATTTCCCTTGGCTATTGTTTTGGCCCCA ACAAGAGAACTCGCGAAACAAGTTGAGAGGGAATTTTCTGATTCTTCCAATGTGGAAACG ATCTGTGTATATGGTGGAACTCCAATTAGCCAGCAAATAAGACAACTCAATTATGGAGTT GATGTTGTTATTGGGACACCAGGACGAGTAATTGACCTGCTTAAAAGAGGTGCTCTGAAT CTGTCAGAGGTCCGGTTTGTTGTTCTTGATGAAGCAGACCAGATGTTGTCAGTGGGTTTT GATGAAGATGTTGAGACAATTTTGGATAGAGTACCTCCAAAACGTCAAACCTTGATGTTC TCTGCGACTATGCCAACTTGGATTCAGAGACTCACCCAGAAATACCTTAAGAATCCTGTT ACAATTGACCTTGTGGGTGAAGATGATCAGAAGCTAGCAGAAGGAATCAGTCTTTATTCT ATCGCTTCAGAGGGCCATGCCAAACCTGCTGTCCTTGGAGAATTGATTAAGGAGCATGCA AAAGGTGGTAAATGCATTGTATTTACACAAACAAAAAGAGATGCTGATCGATTGTCCTAC ACCATGGGTCGGAGTTTCCAGTGCCAGGCCCTTCATGGGGACATCACACAAGCCCAAAGA GAGAGAACATTAAAAGGATTCCGTGAAGGCCATTTTAATATTTTGATTGCCACTGATGTT GCTGCTCGTGGTTTGGATATCCCAAATGTAGACTTGGTGATACATTTTGAATTGCCAAAC TCCTCGGAATTGTTTGTTCACAGGTCTGGCCGAACTGGCCGTGCTGGAAAGAAGGGTAAG GCAATTGTTATGCACAGCTATCAACAAAGTAGAGCTATCAGGATGGTTGAGAATGATGTT GGCTGCAAATTTACAGAGCTTCCAAAGATTAATGTTGAAGGTTCTGACTTGATGAGTGGT GGCTTTGATTCCTTCGGTGGTGGTGGATTTGGTCGTGAAGGGGGTGGGTCCTATGGGCGT CGTGGTAGTTTTGGCAGCTCTTCAAGCCGAGGCGGTGGGTTTGGTGATTCAGGGTTTGGT CGTTCAGGTGGTGGATTTGGCCGTTCTGGTGGTGGAGGATTTGGCCGTTCCAGTGGTGGT GGCTTCGGTGATTCTGGGTTTGGCCGTTCAGGTGGTGGTGGTTTCGGAGACTCAGGATTT GGTCGCTCAGGTGGTGGCGGTTACGGTGATTCAGGATTTGGTAGTTCCGGCGGTGGCTCA GGCCGTTCTGGTTTTGGCCGGTCAGGTGGATTTGGAGATTCTGGCTCAGGTAGGTTTGGT GGGGGATTTGGTAACTCTGGCTCAGGCAGTTTTGGCAACTTTGGCGGCAACAATTCTGGA CAATCCGGTGGGTTTGGCTCCTCTTAG

Peptide Sequence

PEP ID	Os12t0611200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:25828666:25832900:-1 gene:Os12g0611200 transcript:Os12t0611200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 9 description:RNA helicase. (Os12t0611200-01)
Sequence	MYSILRRAAPLRRRAVSALAAAVLRREEAAAEVVVSRRATIPAAWFHSSPAWLGFRETGA AGAAARPQYAADEGLFYEEDKRGAKAGGVAAGGAEEGLEVAKLGISPKIVSQLASRGITK LFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIPILDAIIRHNEKNSPGKFPLAIVLAP TRELAKQVEREFSDSSNVETICVYGGTPISQQIRQLNYGVDVVIGTPGRVIDLLKRGALN LSEVRFVVLDEADQMLSVGFDEDVETILDRVPPKRQTLMFSATMPTWIQRLTQKYLKNPV TIDLVGEDDQKLAEGISLYSIASEGHAKPAVLGELIKEHAKGGKCIVFTQTKRDADRLSY TMGRSFQCQALHGDITQAQRERTLKGFREGHFNILIATDVAARGLDIPNVDLVIHFELPN SSELFVHRSGRTGRAGKKGKAIVMHSYQQSRAIRMVENDVGCKFTELPKINVEGSDLMSG GFDSFGGGGFGREGGGSYGRRGSFGSSSSRGGGFGDSGFGRSGGGFGRSGGGGFGRSSGG GFGDSGFGRSGGGGFGDSGFGRSGGGGYGDSGFGSSGGGSGRSGFGRSGGFGDSGSGRFG GGFGNSGSGSFGNFGGNNSGQSGGFGSS

Transcript Sequence

Transcript ID	Os12t0611200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25828666:25832900:-1 gene:Os12g0611200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 9 description:RNA helicase. (Os12t0611200-01)
Sequence	ACTTCGTCTCCTCTCCCCTCCAAAACCCTAAACCCCCCAAACCCTAGCCGCCGCCGCCGC CGCCGCAGTCGTCGCCGTCGTCGCAGCAGCAGCGGCAGCGTCACCACCGCGACCGGCGGC TGCAGCGATGTACTCTATCCTTCGCCGCGCGGCGCCGCTCCGGCGGCGCGCCGTTTCCGC CCTGGCCGCCGCGGTTCTCCGGCGGGAGGAGGCGGCGGCGGAGGTGGTCGTGTCGCGGCG GGCGACGATCCCGGCGGCGTGGTTCCACTCCTCCCCGGCGTGGCTGGGGTTCCGGGAGAC GGGGGCCGCGGGGGCGGCGGCGAGGCCGCAGTACGCGGCGGATGAGGGGTTGTTCTACGA GGAGGATAAGAGGGGGGCGAAGGCGGGTGGAGTTGCTGCGGGCGGCGCGGAGGAGGGGTT GGAGGTGGCCAAGCTCGGGATCTCGCCCAAGATCGTCAGCCAGCTCGCCTCGCGCGGCAT AACCAAGCTGTTCCCAATCCAGAGAGCTGTCCTTGAACCAGCAATGCAAGGAAAGGACAT GGTTGGTCGTGCCAAAACAGGTACAGGAAAGACTTTGGCTTTTGGAATCCCCATACTGGA CGCAATTATTCGGCACAATGAAAAGAATAGCCCTGGTAAATTTCCCTTGGCTATTGTTTT GGCCCCAACAAGAGAACTCGCGAAACAAGTTGAGAGGGAATTTTCTGATTCTTCCAATGT GGAAACGATCTGTGTATATGGTGGAACTCCAATTAGCCAGCAAATAAGACAACTCAATTA TGGAGTTGATGTTGTTATTGGGACACCAGGACGAGTAATTGACCTGCTTAAAAGAGGTGC TCTGAATCTGTCAGAGGTCCGGTTTGTTGTTCTTGATGAAGCAGACCAGATGTTGTCAGT GGGTTTTGATGAAGATGTTGAGACAATTTTGGATAGAGTACCTCCAAAACGTCAAACCTT GATGTTCTCTGCGACTATGCCAACTTGGATTCAGAGACTCACCCAGAAATACCTTAAGAA TCCTGTTACAATTGACCTTGTGGGTGAAGATGATCAGAAGCTAGCAGAAGGAATCAGTCT TTATTCTATCGCTTCAGAGGGCCATGCCAAACCTGCTGTCCTTGGAGAATTGATTAAGGA GCATGCAAAAGGTGGTAAATGCATTGTATTTACACAAACAAAAAGAGATGCTGATCGATT GTCCTACACCATGGGTCGGAGTTTCCAGTGCCAGGCCCTTCATGGGGACATCACACAAGC CCAAAGAGAGAGAACATTAAAAGGATTCCGTGAAGGCCATTTTAATATTTTGATTGCCAC TGATGTTGCTGCTCGTGGTTTGGATATCCCAAATGTAGACTTGGTGATACATTTTGAATT GCCAAACTCCTCGGAATTGTTTGTTCACAGGTCTGGCCGAACTGGCCGTGCTGGAAAGAA GGGTAAGGCAATTGTTATGCACAGCTATCAACAAAGTAGAGCTATCAGGATGGTTGAGAA TGATGTTGGCTGCAAATTTACAGAGCTTCCAAAGATTAATGTTGAAGGTTCTGACTTGAT GAGTGGTGGCTTTGATTCCTTCGGTGGTGGTGGATTTGGTCGTGAAGGGGGTGGGTCCTA TGGGCGTCGTGGTAGTTTTGGCAGCTCTTCAAGCCGAGGCGGTGGGTTTGGTGATTCAGG GTTTGGTCGTTCAGGTGGTGGATTTGGCCGTTCTGGTGGTGGAGGATTTGGCCGTTCCAG TGGTGGTGGCTTCGGTGATTCTGGGTTTGGCCGTTCAGGTGGTGGTGGTTTCGGAGACTC AGGATTTGGTCGCTCAGGTGGTGGCGGTTACGGTGATTCAGGATTTGGTAGTTCCGGCGG TGGCTCAGGCCGTTCTGGTTTTGGCCGGTCAGGTGGATTTGGAGATTCTGGCTCAGGTAG GTTTGGTGGGGGATTTGGTAACTCTGGCTCAGGCAGTTTTGGCAACTTTGGCGGCAACAA TTCTGGACAATCCGGTGGGTTTGGCTCCTCTTAGATTGGCAGCTTCTATACTAGGGCAAA AGTAACTACAGTTTTTTATCTATGCTATGGGTGCCTGCTACAAATTTAGATGGACGGTTT TCAGATATTGTCCACCACCACAGAAGGGAATTCCTGACCAATTGTTTGTTTTCCGGAATC ACTACAAGACTGGATATCTAGTGCAAATAGCATATGCTTATCGTTATTATGGGTGAAGGG AATATGAAGGCAGCAGAAAATAATCACGAGTCTTATTTTGTTTTTCTTAGTTATTCCTCC TGCAGGCATTCATGTTTGCAGGAGGACTTTAGTTTCTGGTGCTCGATCTAGCTCATACCT GTAAAATATGGCAGAGGATCTTCTGCAGATGATATATTATAAGTATCTTTTTTTGGTAGT AGTTCTGTATTGTATTTACCGGTGCCTTTCTAGACTATAATAACCTAGATACCTAATGAT CAG