Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0610500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:25790709:25796263:1 gene:Os12g0610500 gene_biotype:protein_coding transcript_biotype:protein_coding description:SAM (and some other nucleotide) binding motif domain containing protein. (Os12t0610500-01)
Sequence	ATGGCGGCGGCGACTCCGGCGAGCGGCGGCGGCGGCGGCGGGTACTCGTGCGAGACGGCG GAGCAGACCCGCGAGTGGATGGAGGCCATCTCCGCCTTTCTCCACCTCCACCGCCCGCTC CTCGAGGCGCACGTCGTCAACTTCTTCAAGGATCGGCTGTGGGAGATGGTGGATGCGGAG TGGATGGAGTGCCTCCGCAGGGAGCCCGTGGAGAGCTTGCTCATGTTGCCCTCCGGATGT GTTCAGGAGCACTGGCCCAGTTCATTGCGAGATTTTGTACTCACTGCAAAGTCACTTGTT CTTCCACGGGAGCAGAAGTCACCGCGATCACTCCTACCCGACTTGCATGTAGCATCAATT AATACTGTTCTCGCTCAAGGAATGAACTCCAAGAAGAAGCATGAAATTGAAACTCTAGCT GGGTTGGTTCATGCAATTACCAAGAGCTGTGGAGCAAAGACAGTGATTGATGTAGGTTCT GGCCAGGGTTATCTTGCCCAAGCCTTATCTTTTGAGTACCAACTCCCTGTTGTAGCAATA GATGCTTCATCACATCATGCATCAGTTACAAATACTCGTGCAGAAAGAATAAAGAAGTAC TACACTGCTAAATGTGTAGGGAAGCAACAGCTCAGAGTACCTAGAACTGTTACTTGCCAT GTACTTTCTAGTGACACATTAGCAGCTGTGACATTGGAAGCATGTCAGGATGATCATGCT GAACATGTACCAGAAAGTAAAAACTTCAACGAGAGCAGTCCACAGATTGAGAAACCAAAT GACAGCATTCCTCCATTAGTCCTTGCTGGTCTTCATGCTTGTGGTGATCTTTCAGTTAAC ATGCTAAGGCTTTTTGTGTCGTGCGAACAAGTAAAAGCATTGATAAGCATTGGCTGTTGC TACAACTTACTCTCTGAGGAATGCCACGAAGACACAAATACCTGTCCTGGTTTTCCTATG AGCAAGGCTGCTAAACTATCTAATTTGGTGCTTAGGAAAAGCACCCGTGACCTTGGTTGC CAGAGTGCAGAGAGATGGAGAAGTCTCACTAAGGACATAGCCCTACAAAATTTTGATATA CATGCCTTCCGTGCTGCATTTCAAATGTTTCTTGAGAAACATTTCCCAGAGGTGTCAAGA TCGAGTCCATCAATTGGGAGGCAAGGAAAAGCACTACGCCGTCAAAGGCTTAGGAAAGTT ATGGAATCCCCTATGGCTATGGCAGAAACTGACGCTTTATCATATTCCACTCAAAAGGAA CAAATCATGACCAAAGACGATCCACTGCCCACAGGCCCTAATAATTTTAAAGAGGTTCAT GTAGACTTTCTTCCCGAGCTTTCAACAGGGTTTGTTGATTCAGCTGTATCTGGAGCTGCC GTTGTACCAGATGACATCTATCTTGATAAATCACAAAAGTTCACCCTGTTTAAAGATTTC ACAGTGTCAGGATTAGGTCGCCTTGGCTGTGATTTTGTGGAAAATGTTAGTTTACTTGAA ATATGGAAGGACGTGCAACCCTTCACGGAATTTATAGGTCCCTTCTGGTGCCTTCGGGTT GCTTTAGGGCCACTGGTGGAAACATATATTTTACTTGACCGGTTACTATTTCTTCAAGAG CAAGGCAGTGTTATTGAAGCATCTTTGTTTCCGCTTTTCAATCCCACTATGTCTCCAAGG AACATGGCAATTATTGCTTGGAAGTTGTCTGCAAATCCTTCAAAAGTGTGA

Peptide Sequence

PEP ID	Os12t0610500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:25790709:25796263:1 gene:Os12g0610500 transcript:Os12t0610500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:SAM (and some other nucleotide) binding motif domain containing protein. (Os12t0610500-01)
Sequence	MAAATPASGGGGGGYSCETAEQTREWMEAISAFLHLHRPLLEAHVVNFFKDRLWEMVDAE WMECLRREPVESLLMLPSGCVQEHWPSSLRDFVLTAKSLVLPREQKSPRSLLPDLHVASI NTVLAQGMNSKKKHEIETLAGLVHAITKSCGAKTVIDVGSGQGYLAQALSFEYQLPVVAI DASSHHASVTNTRAERIKKYYTAKCVGKQQLRVPRTVTCHVLSSDTLAAVTLEACQDDHA EHVPESKNFNESSPQIEKPNDSIPPLVLAGLHACGDLSVNMLRLFVSCEQVKALISIGCC YNLLSEECHEDTNTCPGFPMSKAAKLSNLVLRKSTRDLGCQSAERWRSLTKDIALQNFDI HAFRAAFQMFLEKHFPEVSRSSPSIGRQGKALRRQRLRKVMESPMAMAETDALSYSTQKE QIMTKDDPLPTGPNNFKEVHVDFLPELSTGFVDSAVSGAAVVPDDIYLDKSQKFTLFKDF TVSGLGRLGCDFVENVSLLEIWKDVQPFTEFIGPFWCLRVALGPLVETYILLDRLLFLQE QGSVIEASLFPLFNPTMSPRNMAIIAWKLSANPSKV

Transcript Sequence

Transcript ID	Os12t0610500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25790709:25796263:1 gene:Os12g0610500 gene_biotype:protein_coding transcript_biotype:protein_coding description:SAM (and some other nucleotide) binding motif domain containing protein. (Os12t0610500-01)
Sequence	AGAAACCAACCGTGTCACCACTACTCCCCTCTCCTCTTCACAAGCGATGGCGGCGGCGAC TCCGGCGAGCGGCGGCGGCGGCGGCGGGTACTCGTGCGAGACGGCGGAGCAGACCCGCGA GTGGATGGAGGCCATCTCCGCCTTTCTCCACCTCCACCGCCCGCTCCTCGAGGCGCACGT CGTCAACTTCTTCAAGGATCGGCTGTGGGAGATGGTGGATGCGGAGTGGATGGAGTGCCT CCGCAGGGAGCCCGTGGAGAGCTTGCTCATGTTGCCCTCCGGATGTGTTCAGGAGCACTG GCCCAGTTCATTGCGAGATTTTGTACTCACTGCAAAGTCACTTGTTCTTCCACGGGAGCA GAAGTCACCGCGATCACTCCTACCCGACTTGCATGTAGCATCAATTAATACTGTTCTCGC TCAAGGAATGAACTCCAAGAAGAAGCATGAAATTGAAACTCTAGCTGGGTTGGTTCATGC AATTACCAAGAGCTGTGGAGCAAAGACAGTGATTGATGTAGGTTCTGGCCAGGGTTATCT TGCCCAAGCCTTATCTTTTGAGTACCAACTCCCTGTTGTAGCAATAGATGCTTCATCACA TCATGCATCAGTTACAAATACTCGTGCAGAAAGAATAAAGAAGTACTACACTGCTAAATG TGTAGGGAAGCAACAGCTCAGAGTACCTAGAACTGTTACTTGCCATGTACTTTCTAGTGA CACATTAGCAGCTGTGACATTGGAAGCATGTCAGGATGATCATGCTGAACATGTACCAGA AAGTAAAAACTTCAACGAGAGCAGTCCACAGATTGAGAAACCAAATGACAGCATTCCTCC ATTAGTCCTTGCTGGTCTTCATGCTTGTGGTGATCTTTCAGTTAACATGCTAAGGCTTTT TGTGTCGTGCGAACAAGTAAAAGCATTGATAAGCATTGGCTGTTGCTACAACTTACTCTC TGAGGAATGCCACGAAGACACAAATACCTGTCCTGGTTTTCCTATGAGCAAGGCTGCTAA ACTATCTAATTTGGTGCTTAGGAAAAGCACCCGTGACCTTGGTTGCCAGAGTGCAGAGAG ATGGAGAAGTCTCACTAAGGACATAGCCCTACAAAATTTTGATATACATGCCTTCCGTGC TGCATTTCAAATGTTTCTTGAGAAACATTTCCCAGAGGTGTCAAGATCGAGTCCATCAAT TGGGAGGCAAGGAAAAGCACTACGCCGTCAAAGGCTTAGGAAAGTTATGGAATCCCCTAT GGCTATGGCAGAAACTGACGCTTTATCATATTCCACTCAAAAGGAACAAATCATGACCAA AGACGATCCACTGCCCACAGGCCCTAATAATTTTAAAGAGGTTCATGTAGACTTTCTTCC CGAGCTTTCAACAGGGTTTGTTGATTCAGCTGTATCTGGAGCTGCCGTTGTACCAGATGA CATCTATCTTGATAAATCACAAAAGTTCACCCTGTTTAAAGATTTCACAGTGTCAGGATT AGGTCGCCTTGGCTGTGATTTTGTGGAAAATGTTAGTTTACTTGAAATATGGAAGGACGT GCAACCCTTCACGGAATTTATAGGTCCCTTCTGGTGCCTTCGGGTTGCTTTAGGGCCACT GGTGGAAACATATATTTTACTTGACCGGTTACTATTTCTTCAAGAGCAAGGCAGTGTTAT TGAAGCATCTTTGTTTCCGCTTTTCAATCCCACTATGTCTCCAAGGAACATGGCAATTAT TGCTTGGAAGTTGTCTGCAAATCCTTCAAAAGTGTGACATGGTAGGATGGAGTTCTCAGT TTCCAACACTGCAGAAGTCCTTGCAAATCCATATACGGGAGAGTGGAAGATTTTGCCCTC GAACAGTGTGCCTTTATCCAATAAATGCTAAGTCAACATCTAGAACGGTTCCAAGGCCAT CCGGTGCATGGCTGCTTGTCTCTCTGAAGTGATATCATACAAGTTGCCACCAAACTTCAC ATTCCCTGCAGGCTGCAATATGTTTATGCAAGATCGACAAGCTATCACTAATCAAGGAAA AAGTTGACGAGTCACCTTTTGTCTACAGATATACAACTCGCTGTTATTATTTATACTTCT TTGAAGTAGATTAATCTTTATATTATCCTAACTGGCTGGAAAATATGTTCAGCAAAGCAA CACGGATGAATTGTTTCATGAGATCTTATTTCTTGCCTATCCTTATTC